Wall clock time and date at job start Tue Mar 31 2020 15:33:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 C 1.53000 * 109.47080 * 2 1 4 4 H 1.08999 * 109.46615 * 55.00176 * 3 2 1 5 5 C 1.52998 * 109.47248 * 295.00093 * 3 2 1 6 6 C 1.52997 * 109.47113 * 175.00208 * 3 2 1 7 7 H 1.09008 * 109.46922 * 305.00362 * 6 3 2 8 8 O 1.42900 * 109.47106 * 64.99713 * 6 3 2 9 9 C 1.53002 * 109.47241 * 185.00311 * 6 3 2 10 10 N 1.46501 * 109.46759 * 179.97438 * 9 6 3 11 11 S 1.65605 * 119.99263 * 164.99948 * 10 9 6 12 12 O 1.42105 * 106.39996 * 178.53893 * 11 10 9 13 13 O 1.42099 * 106.40401 * 311.45500 * 11 10 9 14 14 C 1.76200 * 107.21936 * 64.99887 * 11 10 9 15 15 C 1.38658 * 119.87413 * 269.72203 * 14 11 10 16 16 C 1.38616 * 120.49527 * 179.72333 * 15 14 11 17 17 C 1.37630 * 120.25146 * 0.55278 * 16 15 14 18 18 C 1.40700 * 119.74283 * 359.72614 * 17 16 15 19 19 C 1.41406 * 120.24056 * 180.02562 * 18 17 16 20 20 H 1.07998 * 119.99436 * 204.37252 * 19 18 17 21 21 C 1.39936 * 120.00062 * 24.36678 * 19 18 17 22 22 N 1.30825 * 120.00001 * 17.86587 * 21 19 18 23 23 Si 1.86802 * 119.99904 * 197.86176 * 21 19 18 24 24 H 1.48500 * 109.47111 * 90.00378 * 23 21 19 25 25 H 1.48506 * 109.47273 * 210.00277 * 23 21 19 26 26 H 1.48497 * 109.47414 * 330.00257 * 23 21 19 27 27 C 1.37593 * 119.87341 * 89.99954 * 14 11 10 28 28 H 1.09004 * 109.46932 * 60.00325 * 1 2 3 29 29 H 1.08991 * 109.47089 * 300.00017 * 1 2 3 30 30 H 1.09003 * 109.47137 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47158 * 120.00219 * 2 1 3 32 32 H 1.09004 * 109.46900 * 240.00203 * 2 1 3 33 33 H 1.08991 * 109.47636 * 180.02562 * 5 3 2 34 34 H 1.09008 * 109.47094 * 300.00130 * 5 3 2 35 35 H 1.09007 * 109.47378 * 59.99645 * 5 3 2 36 36 H 0.96696 * 114.00020 * 60.00422 * 8 6 3 37 37 H 1.08996 * 109.46648 * 299.99606 * 9 6 3 38 38 H 1.08998 * 109.46932 * 59.99722 * 9 6 3 39 39 H 0.96991 * 120.00593 * 344.99862 * 10 9 6 40 40 H 1.07994 * 119.74614 * 0.02562 * 15 14 11 41 41 H 1.08005 * 119.86922 * 180.25721 * 16 15 14 42 42 H 1.07996 * 120.12847 * 179.70321 * 17 16 15 43 43 H 0.97001 * 119.99549 * 179.97438 * 22 21 19 44 44 H 1.07995 * 120.13230 * 359.97310 * 27 14 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9814 0.8418 5 6 1.6353 2.1266 -1.3073 6 6 3.5648 1.4443 0.1257 7 1 3.8571 0.8799 1.0113 8 8 4.1392 0.8402 -1.0351 9 6 4.0645 2.8850 0.2512 10 7 5.5245 2.8866 0.3721 11 16 6.3720 4.2921 0.1512 12 8 7.7401 3.9738 0.3664 13 8 5.8883 4.8670 -1.0550 14 6 5.9068 5.3909 1.4477 15 6 4.8373 6.2553 1.2701 16 6 4.4567 7.1211 2.2835 17 6 5.1455 7.1394 3.4749 18 6 6.2360 6.2707 3.6641 19 6 6.9508 6.2803 4.8842 20 1 7.9754 5.9401 4.9124 21 6 6.3305 6.7305 6.0550 22 7 5.0260 6.8097 6.1153 23 14 7.3651 7.2185 7.5318 24 1 7.6971 8.6634 7.4479 25 1 6.6020 6.9575 8.7788 26 1 8.6185 6.4224 7.5429 27 6 6.6099 5.3920 2.6304 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 -1.0277 -0.0005 31 1 1.8934 -0.5138 0.8899 32 1 1.8934 -0.5138 -0.8900 33 1 1.9989 3.1540 -1.3076 34 1 2.0699 1.5875 -2.1492 35 1 0.5489 2.1252 -1.3969 36 1 3.9205 1.2911 -1.8621 37 1 3.7723 3.4493 -0.6344 38 1 3.6264 3.3457 1.1365 39 1 5.9948 2.0646 0.5815 40 1 4.2937 6.2505 0.3369 41 1 3.6195 7.7872 2.1357 42 1 4.8503 7.8181 4.2614 43 1 4.5961 7.1215 6.9270 44 1 7.4451 4.7207 2.7652 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000619485874.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:33:24 Heat of formation + Delta-G solvation = -132.649532 kcal Electronic energy + Delta-G solvation = -26075.274277 eV Core-core repulsion = 22311.298637 eV Total energy + Delta-G solvation = -3763.975641 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 327.134 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -39.09348 -37.66143 -36.64723 -35.29729 -35.05691 -34.23176 -33.86508 -30.30262 -30.10075 -29.80880 -27.69312 -25.52425 -25.20571 -22.14196 -21.88274 -21.00122 -20.20630 -19.02519 -17.98891 -17.27611 -16.84722 -16.05417 -15.92918 -15.53818 -15.12177 -15.06853 -14.72743 -14.50107 -14.31151 -13.75688 -13.48146 -13.35323 -13.06953 -12.61033 -12.58148 -12.30686 -11.94984 -11.91222 -11.70163 -11.63394 -11.60734 -11.52526 -11.41051 -11.39686 -11.27023 -11.01616 -10.90249 -10.84430 -10.64706 -10.61929 -9.91757 -9.80661 -9.67683 -9.37975 -9.12972 -8.06560 -7.73292 -6.95418 -4.56053 1.03526 2.17459 2.60761 2.98537 3.02803 3.05087 3.55205 3.81152 4.23483 4.24482 4.40583 4.48420 4.61515 4.69193 4.94313 5.02513 5.08807 5.20994 5.27603 5.34235 5.37919 5.48507 5.58945 5.73645 5.77343 5.83413 5.85421 5.86422 6.00568 6.07858 6.15109 6.18228 6.19864 6.63399 6.73812 6.82783 7.00972 7.18293 7.24716 7.36150 7.52650 7.70069 7.78889 7.91957 8.38118 8.64513 8.69407 10.00019 Molecular weight = 327.13amu Principal moments of inertia in cm(-1) A = 0.013704 B = 0.003382 C = 0.003034 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2042.782186 B = 8277.451850 C = 9225.561445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C -0.114 4.114 3 C -0.125 4.125 4 H 0.084 0.916 5 C -0.161 4.161 6 C 0.106 3.894 7 H 0.106 0.894 8 O -0.556 6.556 9 C 0.085 3.915 10 N -1.114 6.114 11 S 2.691 3.309 12 O -0.973 6.973 13 O -0.977 6.977 14 C -0.632 4.632 15 C -0.151 4.151 16 C -0.120 4.120 17 C -0.119 4.119 18 C 0.091 3.909 19 C -0.460 4.460 20 H 0.083 0.917 21 C 0.075 3.925 22 N -0.794 5.794 23 Si 0.912 3.088 24 H -0.266 1.266 25 H -0.277 1.277 26 H -0.260 1.260 27 C -0.123 4.123 28 H 0.055 0.945 29 H 0.053 0.947 30 H 0.051 0.949 31 H 0.061 0.939 32 H 0.067 0.933 33 H 0.063 0.937 34 H 0.058 0.942 35 H 0.063 0.937 36 H 0.374 0.626 37 H 0.082 0.918 38 H 0.078 0.922 39 H 0.416 0.584 40 H 0.105 0.895 41 H 0.098 0.902 42 H 0.125 0.875 43 H 0.283 0.717 44 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.445 -9.073 -7.920 14.709 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.151 4.151 3 C -0.144 4.144 4 H 0.102 0.898 5 C -0.218 4.218 6 C 0.046 3.954 7 H 0.124 0.876 8 O -0.362 6.362 9 C -0.042 4.042 10 N -0.873 5.873 11 S 2.787 3.213 12 O -0.963 6.963 13 O -0.967 6.967 14 C -0.724 4.724 15 C -0.172 4.172 16 C -0.140 4.140 17 C -0.139 4.139 18 C 0.088 3.912 19 C -0.489 4.489 20 H 0.101 0.899 21 C -0.143 4.143 22 N -0.419 5.419 23 Si 0.736 3.264 24 H -0.191 1.191 25 H -0.202 1.202 26 H -0.184 1.184 27 C -0.145 4.145 28 H 0.074 0.926 29 H 0.073 0.927 30 H 0.070 0.930 31 H 0.080 0.920 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.222 0.778 37 H 0.100 0.900 38 H 0.096 0.904 39 H 0.250 0.750 40 H 0.123 0.877 41 H 0.116 0.884 42 H 0.142 0.858 43 H 0.094 0.906 44 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -7.898 -9.125 -8.059 14.512 hybrid contribution -0.180 0.617 1.250 1.405 sum -8.077 -8.508 -6.809 13.565 Atomic orbital electron populations 1.21842 0.96008 1.01438 1.01900 1.21478 0.95508 0.95638 1.02506 1.21833 0.95523 0.97398 0.99657 0.89759 1.21998 1.02177 1.00786 0.96843 1.22179 0.91386 0.92323 0.89558 0.87592 1.86558 1.75942 1.56921 1.16749 1.22026 0.80345 0.98777 1.03024 1.55404 1.15533 1.26662 1.89691 1.01595 0.72634 0.72705 0.74406 1.93538 1.31991 1.83895 1.86896 1.93499 1.81613 1.77461 1.44155 1.29764 1.09470 1.17616 1.15557 1.20069 0.98124 1.00342 0.98670 1.20805 0.99533 0.99233 0.94417 1.21635 0.97491 0.98841 0.95920 1.17694 0.91854 0.89434 0.92231 1.19643 0.99795 1.37677 0.91821 0.89867 1.25934 0.94994 0.92709 1.00654 1.69781 1.09728 1.33257 1.29147 0.86235 0.80711 0.80037 0.79378 1.19141 1.20203 1.18405 1.20786 1.00223 1.00363 0.93091 0.92555 0.92747 0.92961 0.91990 0.91434 0.91821 0.92342 0.91816 0.77805 0.90024 0.90429 0.74988 0.87681 0.88416 0.85752 0.90581 0.87034 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.12 9.67 37.16 0.36 -0.77 16 2 C -0.11 -0.92 5.25 -26.73 -0.14 -1.06 16 3 C -0.12 -1.06 2.22 -90.62 -0.20 -1.27 16 4 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 5 C -0.16 -1.25 8.28 37.16 0.31 -0.94 16 6 C 0.11 1.07 2.80 -26.73 -0.07 1.00 16 7 H 0.11 1.07 8.14 -51.92 -0.42 0.65 16 8 O -0.56 -5.85 12.73 -35.23 -0.45 -6.30 16 9 C 0.09 1.05 5.64 -4.04 -0.02 1.03 16 10 N -1.11 -16.06 5.86 -10.61 -0.06 -16.12 16 11 S 2.69 50.10 5.73 -107.50 -0.62 49.48 16 12 O -0.97 -20.62 17.27 -57.17 -0.99 -21.61 16 13 O -0.98 -19.54 16.73 -57.17 -0.96 -20.49 16 14 C -0.63 -13.62 5.94 -39.66 -0.24 -13.86 16 15 C -0.15 -3.20 9.53 -39.29 -0.37 -3.57 16 16 C -0.12 -2.65 10.02 -39.66 -0.40 -3.05 16 17 C -0.12 -2.93 8.70 -38.87 -0.34 -3.27 16 18 C 0.09 2.34 5.58 -106.82 -0.60 1.75 16 19 C -0.46 -11.73 9.05 -37.74 -0.34 -12.08 16 20 H 0.08 2.05 7.91 -52.49 -0.42 1.64 16 21 C 0.08 1.80 5.14 -17.34 -0.09 1.71 16 22 N -0.79 -19.36 10.95 55.55 0.61 -18.75 16 23 Si 0.91 17.93 29.60 -169.99 -5.03 12.90 16 24 H -0.27 -5.20 7.11 56.52 0.40 -4.80 16 25 H -0.28 -5.31 7.11 56.52 0.40 -4.91 16 26 H -0.26 -5.10 7.11 56.52 0.40 -4.69 16 27 C -0.12 -2.94 9.26 -38.88 -0.36 -3.30 16 28 H 0.06 0.39 6.57 -51.93 -0.34 0.05 16 29 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 30 H 0.05 0.35 8.14 -51.93 -0.42 -0.07 16 31 H 0.06 0.52 8.14 -51.93 -0.42 0.09 16 32 H 0.07 0.57 7.96 -51.93 -0.41 0.16 16 33 H 0.06 0.53 6.56 -51.93 -0.34 0.19 16 34 H 0.06 0.41 6.72 -51.92 -0.35 0.06 16 35 H 0.06 0.45 6.57 -51.92 -0.34 0.11 16 36 H 0.37 3.13 7.19 45.56 0.33 3.45 16 37 H 0.08 0.97 6.17 -51.93 -0.32 0.65 16 38 H 0.08 0.98 8.14 -51.93 -0.42 0.56 16 39 H 0.42 5.36 8.65 -34.47 -0.30 5.06 16 40 H 0.11 1.99 7.59 -52.49 -0.40 1.59 16 41 H 0.10 1.87 8.06 -52.48 -0.42 1.45 16 42 H 0.12 3.11 6.16 -52.49 -0.32 2.79 16 43 H 0.28 6.26 8.30 -40.82 -0.34 5.92 16 44 H 0.11 2.57 7.60 -52.49 -0.40 2.17 16 LS Contribution 368.12 15.07 5.55 5.55 Total: -1.00 -30.47 368.12 -10.16 -40.63 By element: Atomic # 1 Polarization: 18.10 SS G_CDS: -5.71 Total: 12.40 kcal Atomic # 6 Polarization: -35.18 SS G_CDS: -2.50 Total: -37.68 kcal Atomic # 7 Polarization: -35.42 SS G_CDS: 0.55 Total: -34.87 kcal Atomic # 8 Polarization: -46.01 SS G_CDS: -2.39 Total: -48.41 kcal Atomic # 14 Polarization: 17.93 SS G_CDS: -5.03 Total: 12.90 kcal Atomic # 16 Polarization: 50.10 SS G_CDS: -0.62 Total: 49.48 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -30.47 -10.16 -40.63 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000619485874.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.020 kcal (2) G-P(sol) polarization free energy of solvation -30.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.630 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.650 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds