Wall clock time and date at job start Tue Mar 31 2020 15:36:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34228 * 117.00643 * 2 1 4 4 O 1.20829 * 119.99464 * 359.97438 * 3 2 1 5 5 C 1.50698 * 120.00428 * 180.02562 * 3 2 1 6 6 N 1.46502 * 109.47309 * 179.97438 * 5 3 2 7 7 C 1.36932 * 120.00073 * 95.42951 * 6 5 3 8 8 H 1.08000 * 119.99642 * 168.76584 * 7 6 5 9 9 C 1.38811 * 120.00268 * 348.48198 * 7 6 5 10 10 N 1.31617 * 119.99839 * 339.11360 * 9 7 6 11 11 Si 1.86803 * 119.99874 * 159.10765 * 9 7 6 12 12 H 1.48494 * 109.46962 * 4.99918 * 11 9 7 13 13 H 1.48496 * 109.46718 * 124.99994 * 11 9 7 14 14 H 1.48499 * 109.46689 * 244.99968 * 11 9 7 15 15 C 1.46495 * 119.99325 * 275.43164 * 6 5 3 16 16 C 1.50704 * 109.47021 * 269.99360 * 15 6 5 17 17 C 1.38259 * 119.98935 * 269.73098 * 16 15 6 18 18 C 1.38200 * 120.00967 * 179.72221 * 17 16 15 19 19 C 1.38368 * 119.98536 * 0.55142 * 18 17 16 20 20 Cl 1.73605 * 120.01014 * 179.69915 * 19 18 17 21 21 C 1.38324 * 119.97804 * 359.72737 * 19 18 17 22 22 N 1.48016 * 120.01117 * 180.02562 * 21 19 18 23 23 O 1.21801 * 120.00634 * 179.97438 * 22 21 19 24 24 O 1.21807 * 120.00004 * 359.97129 * 22 21 19 25 25 C 1.38222 * 119.98291 * 90.00731 * 16 15 6 26 26 H 1.08994 * 109.47597 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.46896 * 300.01218 * 1 2 3 28 28 H 1.09005 * 109.46387 * 60.00316 * 1 2 3 29 29 H 1.08993 * 109.47371 * 59.99026 * 5 3 2 30 30 H 1.09010 * 109.46494 * 299.99545 * 5 3 2 31 31 H 0.96996 * 120.00043 * 180.02562 * 10 9 7 32 32 H 1.09004 * 109.47945 * 29.99659 * 15 6 5 33 33 H 1.08999 * 109.47117 * 150.00375 * 15 6 5 34 34 H 1.07991 * 119.99594 * 0.02562 * 17 16 15 35 35 H 1.08000 * 120.00182 * 180.24753 * 18 17 16 36 36 H 1.08004 * 119.99155 * 0.02562 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 7 3.9819 2.6796 -0.0011 7 6 4.2841 3.3046 1.1792 8 1 4.7608 4.2737 1.1704 9 6 3.9726 2.6954 2.3869 10 7 3.0515 1.7562 2.4319 11 14 4.8606 3.2083 3.9483 12 1 5.7548 4.3568 3.6545 13 1 3.8651 3.6061 4.9759 14 1 5.6677 2.0696 4.4554 15 6 4.0740 3.4156 -1.2644 16 6 5.4619 3.2669 -1.8324 17 6 6.4455 4.1806 -1.5017 18 6 7.7200 4.0414 -2.0177 19 6 8.0085 2.9939 -2.8746 20 17 9.6072 2.8229 -3.5294 21 6 7.0225 2.0834 -3.2096 22 7 7.3305 0.9623 -4.1257 23 8 6.4624 0.1604 -4.4203 24 8 8.4522 0.8417 -4.5850 25 6 5.7496 2.2204 -2.6883 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5140 0.8899 28 1 -0.3632 0.5138 -0.8901 29 1 3.9558 0.7807 -0.8907 30 1 3.9564 0.7804 0.8893 31 1 2.8335 1.3307 3.2758 32 1 3.3472 3.0160 -1.9717 33 1 3.8655 4.4705 -1.0863 34 1 6.2192 5.0003 -0.8361 35 1 8.4892 4.7529 -1.7561 36 1 4.9795 1.5098 -2.9501 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000153981187.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:36:33 Heat of formation + Delta-G solvation = -30.221426 kcal Electronic energy + Delta-G solvation = -25846.416236 eV Core-core repulsion = 21747.746405 eV Total energy + Delta-G solvation = -4098.669831 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 328.070 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -42.03648 -39.64338 -39.07612 -36.97139 -36.33913 -36.09954 -34.80532 -32.58951 -31.93544 -30.62060 -28.36433 -26.54528 -26.23514 -25.98885 -23.00374 -22.54963 -21.31037 -19.94972 -18.74192 -18.48557 -17.42776 -17.20681 -16.81530 -16.45047 -15.73969 -15.69570 -15.29322 -14.96673 -14.62832 -14.03077 -13.89798 -13.63145 -13.43097 -12.68733 -12.43451 -12.31856 -12.12085 -11.85736 -11.65691 -11.54556 -11.27313 -11.23235 -11.12832 -10.97947 -10.95419 -10.62145 -10.36567 -10.29932 -10.20122 -9.79072 -9.60522 -9.43457 -8.91153 -8.74527 -7.39864 -6.13563 -3.48206 -0.09812 0.85043 1.39304 1.45065 1.82517 3.20161 3.22910 3.30085 3.31676 3.66398 3.87076 4.22338 4.27321 4.58994 4.85135 4.92493 4.98693 5.12954 5.16958 5.41021 5.57331 5.70135 5.75384 5.78735 5.85926 5.96433 6.12157 6.19353 6.28944 6.40923 6.52022 6.53959 6.93932 7.42354 7.57882 7.78523 7.91453 8.75246 9.16239 9.44236 9.83408 10.96055 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.012422 B = 0.004321 C = 0.003497 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2253.557702 B = 6477.698036 C = 8004.818361 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.042 3.958 2 O -0.379 6.379 3 C 0.466 3.534 4 O -0.512 6.512 5 C 0.180 3.820 6 N -0.559 5.559 7 C -0.262 4.262 8 H 0.084 0.916 9 C 0.005 3.995 10 N -0.902 5.902 11 Si 0.912 3.088 12 H -0.277 1.277 13 H -0.290 1.290 14 H -0.286 1.286 15 C 0.178 3.822 16 C -0.073 4.073 17 C -0.037 4.037 18 C -0.113 4.113 19 C 0.002 3.998 20 Cl -0.024 7.024 21 C -0.043 4.043 22 N 0.031 4.969 23 O -0.168 6.168 24 O -0.149 6.149 25 C -0.039 4.039 26 H 0.083 0.917 27 H 0.053 0.947 28 H 0.047 0.953 29 H 0.050 0.950 30 H 0.129 0.871 31 H 0.260 0.740 32 H 0.060 0.940 33 H 0.075 0.925 34 H 0.151 0.849 35 H 0.151 0.849 36 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.722 2.036 -8.556 10.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 O -0.296 6.296 3 C 0.307 3.693 4 O -0.398 6.398 5 C 0.052 3.948 6 N -0.276 5.276 7 C -0.390 4.390 8 H 0.102 0.898 9 C -0.193 4.193 10 N -0.546 5.546 11 Si 0.741 3.259 12 H -0.202 1.202 13 H -0.217 1.217 14 H -0.213 1.213 15 C 0.050 3.950 16 C -0.077 4.077 17 C -0.056 4.056 18 C -0.133 4.133 19 C -0.026 4.026 20 Cl 0.005 6.995 21 C -0.127 4.127 22 N 0.550 4.450 23 O -0.381 6.381 24 O -0.367 6.367 25 C -0.059 4.059 26 H 0.101 0.899 27 H 0.072 0.928 28 H 0.065 0.935 29 H 0.068 0.932 30 H 0.146 0.854 31 H 0.071 0.929 32 H 0.078 0.922 33 H 0.093 0.907 34 H 0.168 0.832 35 H 0.169 0.831 36 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 5.384 2.782 -7.990 10.028 hybrid contribution 0.223 -0.065 0.822 0.855 sum 5.607 2.716 -7.168 9.497 Atomic orbital electron populations 1.22897 0.79513 1.01605 1.01310 1.86548 1.21179 1.36394 1.85472 1.25486 0.93487 0.80240 0.70093 1.90475 1.66841 1.36539 1.45901 1.20612 0.85465 0.86381 1.02390 1.43954 1.74555 1.07522 1.01602 1.19308 1.33461 1.03628 0.82587 0.89812 1.24830 0.97302 0.99092 0.98097 1.69881 1.29339 1.29268 1.26148 0.86083 0.79131 0.77980 0.82696 1.20186 1.21681 1.21267 1.19861 0.88025 0.98404 0.88685 1.21407 1.01083 0.92225 0.93000 1.21559 0.90948 0.98257 0.94883 1.21167 0.98467 0.96895 0.96733 1.20665 0.87439 0.96084 0.98446 1.98435 1.19962 1.97059 1.83997 1.20867 0.96662 0.92656 1.02562 1.43493 1.00472 1.01212 0.99844 1.94541 1.42081 1.37855 1.63613 1.94579 1.07680 1.79827 1.54638 1.21017 0.93424 0.97768 0.93695 0.89888 0.92825 0.93463 0.93212 0.85351 0.92903 0.92206 0.90715 0.83178 0.83143 0.82706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 38. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.70 10.56 101.05 1.07 1.77 16 2 O -0.38 -7.83 10.56 -39.25 -0.41 -8.25 16 3 C 0.47 10.64 6.31 36.00 0.23 10.87 16 4 O -0.51 -13.06 16.13 -18.75 -0.30 -13.37 16 5 C 0.18 3.88 5.49 -5.19 -0.03 3.85 16 6 N -0.56 -11.87 2.01 -175.98 -0.35 -12.22 16 7 C -0.26 -6.16 9.71 -15.06 -0.15 -6.31 16 8 H 0.08 1.87 7.91 -52.49 -0.42 1.45 16 9 C 0.01 0.13 4.96 -17.43 -0.09 0.04 16 10 N -0.90 -23.72 9.25 55.49 0.51 -23.20 16 11 Si 0.91 19.94 29.60 -169.99 -5.03 14.91 16 12 H -0.28 -5.83 7.11 56.52 0.40 -5.43 16 13 H -0.29 -6.59 7.11 56.52 0.40 -6.19 16 14 H -0.29 -6.35 7.11 56.52 0.40 -5.94 16 15 C 0.18 3.00 5.78 -5.19 -0.03 2.97 16 16 C -0.07 -1.04 5.46 -104.62 -0.57 -1.61 16 17 C -0.04 -0.46 9.70 -39.59 -0.38 -0.85 16 18 C -0.11 -1.29 9.83 -39.55 -0.39 -1.68 16 19 C 0.00 0.03 6.32 -39.50 -0.25 -0.22 16 20 Cl -0.02 -0.30 25.94 -51.86 -1.35 -1.65 16 21 C -0.04 -0.64 6.85 -79.92 -0.55 -1.19 16 22 N 0.03 0.51 4.45 33.98 0.15 0.66 16 23 O -0.17 -2.82 18.45 -29.46 -0.54 -3.36 16 24 O -0.15 -2.43 16.02 -29.46 -0.47 -2.90 16 25 C -0.04 -0.56 9.21 -39.59 -0.36 -0.93 16 26 H 0.08 1.08 8.14 -51.93 -0.42 0.66 16 27 H 0.05 0.96 8.13 -51.93 -0.42 0.54 16 28 H 0.05 0.75 8.13 -51.93 -0.42 0.32 16 29 H 0.05 0.92 8.11 -51.93 -0.42 0.50 16 30 H 0.13 3.05 5.99 -51.92 -0.31 2.74 16 31 H 0.26 6.77 8.31 -40.82 -0.34 6.43 16 32 H 0.06 0.98 8.02 -51.93 -0.42 0.57 16 33 H 0.07 1.22 7.98 -51.93 -0.41 0.81 16 34 H 0.15 1.64 8.06 -52.49 -0.42 1.22 16 35 H 0.15 1.30 8.06 -52.49 -0.42 0.87 16 36 H 0.16 2.14 7.61 -52.48 -0.40 1.74 16 LS Contribution 338.40 15.07 5.10 5.10 Total: -1.00 -29.46 338.40 -7.83 -37.29 By element: Atomic # 1 Polarization: 3.92 SS G_CDS: -3.63 Total: 0.29 kcal Atomic # 6 Polarization: 8.21 SS G_CDS: -1.50 Total: 6.71 kcal Atomic # 7 Polarization: -35.08 SS G_CDS: 0.31 Total: -34.77 kcal Atomic # 8 Polarization: -26.15 SS G_CDS: -1.73 Total: -27.88 kcal Atomic # 14 Polarization: 19.94 SS G_CDS: -5.03 Total: 14.91 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -1.35 Total: -1.65 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -29.46 -7.83 -37.29 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000153981187.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.073 kcal (2) G-P(sol) polarization free energy of solvation -29.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.830 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.294 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds