Wall clock time and date at job start Tue Mar 31 2020 14:54:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 N 1.31693 * 119.69949 * 2 1 4 4 C 1.32028 * 121.87409 * 180.27168 * 3 2 1 5 5 Cl 1.73600 * 119.48392 * 179.72566 * 4 3 2 6 6 C 1.38663 * 121.02826 * 359.74643 * 4 3 2 7 7 Cl 1.73606 * 120.36600 * 180.02562 * 6 4 3 8 8 C 1.38364 * 119.27296 * 359.97438 * 6 4 3 9 9 C 1.39513 * 119.69266 * 179.73427 * 2 1 3 10 10 C 1.47795 * 120.53689 * 359.97438 * 9 2 1 11 11 O 1.21556 * 119.99923 * 1.89375 * 10 9 2 12 12 N 1.34774 * 119.99944 * 181.89835 * 10 9 2 13 13 C 1.46504 * 120.00031 * 185.04722 * 12 10 9 14 14 C 1.52998 * 109.46873 * 184.98569 * 13 12 10 15 15 C 1.50692 * 115.55466 * 54.31217 * 14 13 12 16 16 H 1.08000 * 120.00048 * 215.37619 * 15 14 13 17 17 C 1.37879 * 119.99815 * 35.09670 * 15 14 13 18 18 N 1.31515 * 120.00379 * 356.48050 * 17 15 14 19 19 Si 1.86803 * 119.99858 * 176.47824 * 17 15 14 20 20 H 1.48496 * 109.47112 * 359.97438 * 19 17 15 21 21 H 1.48495 * 109.47072 * 120.00130 * 19 17 15 22 22 H 1.48497 * 109.47191 * 240.00087 * 19 17 15 23 23 C 1.53004 * 117.49652 * 199.98175 * 14 13 12 24 24 C 1.52999 * 117.49714 * 268.63547 * 14 13 12 25 25 H 1.08999 * 109.47349 * 262.68828 * 1 2 3 26 26 H 1.09004 * 109.46508 * 22.67902 * 1 2 3 27 27 H 1.08996 * 109.47466 * 142.68189 * 1 2 3 28 28 H 1.08000 * 120.85625 * 180.02562 * 8 6 4 29 29 H 0.97001 * 119.99883 * 5.03291 * 12 10 9 30 30 H 1.09001 * 109.47247 * 64.97879 * 13 12 10 31 31 H 1.09002 * 109.46667 * 304.98124 * 13 12 10 32 32 H 0.96996 * 119.99694 * 184.99991 * 18 17 15 33 33 H 1.09000 * 117.49889 * 215.00230 * 23 14 13 34 34 H 1.09011 * 117.49857 * 0.02562 * 23 14 13 35 35 H 1.09003 * 117.50196 * 359.97438 * 24 14 13 36 36 H 1.09000 * 117.49773 * 144.97352 * 24 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1595 1.1439 0.0000 4 6 3.4788 1.1940 -0.0053 5 17 4.2753 2.7366 -0.0122 6 6 4.2381 0.0338 -0.0059 7 17 5.9721 0.1197 -0.0123 8 6 3.5988 -1.1932 -0.0003 9 6 2.1981 -1.2119 0.0056 10 6 1.4643 -2.4948 0.0121 11 8 0.2492 -2.5001 -0.0222 12 7 2.1423 -3.6587 0.0562 13 6 1.4223 -4.9303 -0.0488 14 6 2.4011 -6.0888 0.1530 15 6 3.2121 -6.0409 1.4222 16 1 4.2326 -6.3945 1.4246 17 6 2.6532 -5.5403 2.5789 18 7 1.4368 -5.0409 2.5589 19 14 3.6239 -5.5714 4.1746 20 1 4.9562 -6.1806 3.9318 21 1 3.7973 -4.1843 4.6757 22 1 2.8897 -6.3745 5.1851 23 6 1.9828 -7.4658 -0.3665 24 6 3.0718 -6.6720 -1.0924 25 1 -0.3634 -0.1308 1.0193 26 1 -0.3632 0.9483 -0.3963 27 1 -0.3634 -0.8172 -0.6230 28 1 4.1650 -2.1129 -0.0002 29 1 3.1070 -3.6545 0.1572 30 1 0.9649 -5.0086 -1.0352 31 1 0.6465 -4.9728 0.7157 32 1 1.0709 -4.6232 3.3542 33 1 2.2941 -8.3370 0.2098 34 1 1.0103 -7.5462 -0.8524 35 1 2.8153 -6.2307 -2.0555 36 1 4.0998 -7.0206 -0.9938 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000404676878.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:54:12 Heat of formation + Delta-G solvation = 14.051402 kcal Electronic energy + Delta-G solvation = -23277.384613 eV Core-core repulsion = 19621.343761 eV Total energy + Delta-G solvation = -3656.040852 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 328.049 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.82570 -38.68992 -37.04724 -36.81961 -36.68297 -33.84353 -32.58338 -32.26132 -32.18080 -27.96118 -26.17650 -25.51460 -24.28479 -22.47367 -21.36711 -20.16686 -19.40390 -17.82726 -17.44218 -16.83639 -16.04146 -15.43647 -15.29030 -14.89983 -14.59880 -14.17358 -13.89491 -13.71612 -13.18318 -12.99062 -12.89251 -12.71946 -12.20370 -12.08646 -11.82465 -11.64979 -11.57162 -11.45569 -11.16394 -11.14445 -10.80133 -10.60281 -10.35521 -10.12502 -9.94379 -9.80650 -9.18721 -9.03103 -8.96032 -8.88437 -8.39374 -8.03764 -6.10070 -4.30109 0.32615 0.74935 1.44793 1.74779 2.92316 3.14285 3.25843 3.27296 3.68422 3.83670 4.14718 4.21636 4.44639 4.50233 4.74517 4.86289 5.14463 5.37090 5.49509 5.59925 5.84121 5.87740 5.92758 5.99825 6.19302 6.40570 6.49514 6.51389 6.58852 6.79382 6.96599 7.16193 7.38097 7.40720 7.50127 7.85920 8.19189 8.30395 8.71339 8.87985 9.34333 10.79202 Molecular weight = 328.05amu Principal moments of inertia in cm(-1) A = 0.013028 B = 0.004173 C = 0.003823 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2148.779422 B = 6708.315015 C = 7322.379977 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.113 4.113 2 C 0.206 3.794 3 N -0.471 5.471 4 C 0.201 3.799 5 Cl -0.014 7.014 6 C -0.093 4.093 7 Cl -0.034 7.034 8 C -0.020 4.020 9 C -0.157 4.157 10 C 0.553 3.447 11 O -0.538 6.538 12 N -0.668 5.668 13 C 0.163 3.837 14 C 0.034 3.966 15 C -0.498 4.498 16 H 0.062 0.938 17 C 0.075 3.925 18 N -0.866 5.866 19 Si 0.891 3.109 20 H -0.272 1.272 21 H -0.283 1.283 22 H -0.282 1.282 23 C -0.197 4.197 24 C -0.212 4.212 25 H 0.088 0.912 26 H 0.069 0.931 27 H 0.119 0.881 28 H 0.162 0.838 29 H 0.396 0.604 30 H 0.023 0.977 31 H 0.123 0.877 32 H 0.263 0.737 33 H 0.080 0.920 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.280 10.549 -5.528 12.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.169 4.169 2 C 0.067 3.933 3 N -0.183 5.183 4 C 0.035 3.965 5 Cl 0.015 6.985 6 C -0.123 4.123 7 Cl -0.006 7.006 8 C -0.047 4.047 9 C -0.163 4.163 10 C 0.337 3.663 11 O -0.418 6.418 12 N -0.314 5.314 13 C 0.041 3.959 14 C 0.033 3.967 15 C -0.535 4.535 16 H 0.080 0.920 17 C -0.130 4.130 18 N -0.502 5.502 19 Si 0.718 3.282 20 H -0.197 1.197 21 H -0.209 1.209 22 H -0.208 1.208 23 C -0.235 4.235 24 C -0.250 4.250 25 H 0.107 0.893 26 H 0.088 0.912 27 H 0.137 0.863 28 H 0.180 0.820 29 H 0.231 0.769 30 H 0.041 0.959 31 H 0.140 0.860 32 H 0.074 0.926 33 H 0.098 0.902 34 H 0.086 0.914 35 H 0.087 0.913 36 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 3.011 11.443 -5.415 13.013 hybrid contribution 1.927 -0.630 1.024 2.271 sum 4.938 10.813 -4.391 12.672 Atomic orbital electron populations 1.21219 0.86099 1.04467 1.05163 1.21578 0.97984 0.85170 0.88529 1.67121 1.06490 1.29768 1.14894 1.21648 0.89756 0.87063 0.98055 1.98420 1.76874 1.27133 1.96060 1.21453 0.87182 0.93776 1.09904 1.98397 1.06794 1.98558 1.96811 1.21837 0.93736 0.97212 0.91896 1.21228 0.93131 0.96835 1.05135 1.17520 0.87112 0.82906 0.78724 1.90654 1.12807 1.86664 1.51724 1.45587 1.10966 1.05507 1.69376 1.21189 0.96039 0.79771 0.98949 1.19240 0.95914 0.89787 0.91767 1.20545 0.98258 1.42986 0.91740 0.91980 1.24993 0.94667 0.94567 0.98758 1.69833 1.14452 1.36842 1.29095 0.86548 0.80163 0.77899 0.83577 1.19664 1.20914 1.20755 1.22942 0.96945 0.98465 1.05183 1.22972 0.96966 1.08140 0.96891 0.89341 0.91188 0.86348 0.82013 0.76874 0.95908 0.86003 0.92607 0.90156 0.91386 0.91303 0.90554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.59 8.96 36.01 0.32 -1.27 16 2 C 0.21 3.18 6.82 -82.18 -0.56 2.62 16 3 N -0.47 -7.11 10.24 -6.25 -0.06 -7.18 16 4 C 0.20 2.83 7.28 -17.31 -0.13 2.70 16 5 Cl -0.01 -0.16 28.10 -51.86 -1.46 -1.62 16 6 C -0.09 -1.26 6.34 -39.38 -0.25 -1.51 16 7 Cl -0.03 -0.41 27.97 -51.86 -1.45 -1.86 16 8 C -0.02 -0.28 9.44 -38.84 -0.37 -0.65 16 9 C -0.16 -2.52 5.89 -104.82 -0.62 -3.14 16 10 C 0.55 10.40 7.74 -12.35 -0.10 10.31 16 11 O -0.54 -11.19 13.24 5.32 0.07 -11.12 16 12 N -0.67 -12.94 4.98 -61.26 -0.31 -13.24 16 13 C 0.16 3.52 4.62 -4.04 -0.02 3.50 16 14 C 0.03 0.73 2.04 -155.66 -0.32 0.42 16 15 C -0.50 -11.88 8.44 -34.44 -0.29 -12.17 16 16 H 0.06 1.50 7.82 -52.49 -0.41 1.09 16 17 C 0.07 1.82 5.30 -17.82 -0.09 1.72 16 18 N -0.87 -21.86 10.12 55.43 0.56 -21.30 16 19 Si 0.89 19.44 29.54 -169.99 -5.02 14.42 16 20 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 21 H -0.28 -6.22 7.11 56.52 0.40 -5.82 16 22 H -0.28 -6.29 7.11 56.52 0.40 -5.88 16 23 C -0.20 -4.02 9.96 -26.70 -0.27 -4.28 16 24 C -0.21 -4.08 9.92 -26.70 -0.26 -4.35 16 25 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 26 H 0.07 0.85 8.14 -51.93 -0.42 0.43 16 27 H 0.12 1.82 5.68 -51.93 -0.29 1.53 16 28 H 0.16 2.05 6.55 -52.49 -0.34 1.71 16 29 H 0.40 7.20 6.25 -40.82 -0.26 6.95 16 30 H 0.02 0.48 8.09 -51.93 -0.42 0.06 16 31 H 0.12 3.04 5.88 -51.93 -0.31 2.74 16 32 H 0.26 6.58 8.32 -40.82 -0.34 6.24 16 33 H 0.08 1.66 8.14 -51.93 -0.42 1.23 16 34 H 0.07 1.31 8.14 -51.92 -0.42 0.88 16 35 H 0.07 1.22 8.14 -51.93 -0.42 0.80 16 36 H 0.08 1.44 8.14 -51.93 -0.42 1.01 16 LS Contribution 335.70 15.07 5.06 5.06 Total: -1.00 -25.41 335.70 -9.25 -34.67 By element: Atomic # 1 Polarization: 11.99 SS G_CDS: -3.70 Total: 8.29 kcal Atomic # 6 Polarization: -3.17 SS G_CDS: -2.94 Total: -6.12 kcal Atomic # 7 Polarization: -41.91 SS G_CDS: 0.19 Total: -41.72 kcal Atomic # 8 Polarization: -11.19 SS G_CDS: 0.07 Total: -11.12 kcal Atomic # 14 Polarization: 19.44 SS G_CDS: -5.02 Total: 14.42 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -2.91 Total: -3.48 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -25.41 -9.25 -34.67 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000404676878.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.718 kcal (2) G-P(sol) polarization free energy of solvation -25.413 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.305 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.667 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.051 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds