Wall clock time and date at job start Tue Mar 31 2020 15:03:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36034 * 116.99784 * 2 1 4 4 C 1.38505 * 120.06525 * 0.27542 * 3 2 1 5 5 C 1.38361 * 120.01484 * 180.29685 * 4 3 2 6 6 Cl 1.73605 * 119.92370 * 179.69612 * 5 4 3 7 7 C 1.38460 * 120.14653 * 359.67958 * 5 4 3 8 8 Cl 1.73598 * 119.93847 * 180.02562 * 7 5 4 9 9 C 1.38315 * 120.11981 * 0.04291 * 7 5 4 10 10 C 1.38711 * 119.97850 * 359.97438 * 9 7 5 11 11 N 1.40027 * 120.06718 * 180.02562 * 10 9 7 12 12 C 1.46501 * 120.00223 * 0.02562 * 11 10 9 13 13 C 1.52997 * 109.47600 * 179.97438 * 12 11 10 14 14 H 1.09004 * 109.46881 * 54.99574 * 13 12 11 15 15 C 1.47201 * 109.47013 * 295.00411 * 13 12 11 16 16 N 5.33968 * 142.00833 * 137.27710 * 2 1 3 17 17 C 1.52997 * 109.47504 * 174.99935 * 13 12 11 18 18 C 1.50701 * 109.47212 * 184.99949 * 17 13 12 19 19 H 1.07998 * 120.00129 * 0.02562 * 18 17 13 20 20 C 1.37880 * 119.99861 * 179.97438 * 18 17 13 21 21 N 1.31510 * 119.99913 * 0.02562 * 20 18 17 22 22 Si 1.86797 * 119.99734 * 180.02562 * 20 18 17 23 23 H 1.48506 * 109.47294 * 60.00559 * 22 20 18 24 24 H 1.48503 * 109.46954 * 180.02562 * 22 20 18 25 25 H 1.48503 * 109.47431 * 300.00157 * 22 20 18 26 26 H 1.08999 * 109.47514 * 300.00484 * 1 2 3 27 27 H 1.09007 * 109.46636 * 60.00145 * 1 2 3 28 28 H 1.08998 * 109.47345 * 179.97438 * 1 2 3 29 29 H 1.07993 * 119.98904 * 359.97438 * 4 3 2 30 30 H 1.07995 * 120.00365 * 179.97438 * 9 7 5 31 31 H 0.97003 * 120.00204 * 180.02562 * 11 10 9 32 32 H 1.09003 * 109.47017 * 60.00099 * 12 11 10 33 33 H 1.08998 * 109.46949 * 300.00286 * 12 11 10 34 34 H 1.09002 * 109.47153 * 64.99951 * 17 13 12 35 35 H 1.09001 * 109.46832 * 305.00142 * 17 13 12 36 36 H 0.97002 * 119.99768 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2121 0.0000 4 6 1.2935 2.3745 0.0058 5 6 1.9226 3.6068 -0.0005 6 17 0.9764 5.0623 -0.0012 7 6 3.3052 3.6817 -0.0057 8 17 4.0889 5.2306 -0.0128 9 6 4.0629 2.5245 -0.0057 10 6 3.4375 1.2865 0.0001 11 7 4.2028 0.1138 0.0007 12 6 5.6656 0.1938 -0.0043 13 6 6.2537 -1.2186 -0.0019 14 1 5.8464 -1.7832 -0.8406 15 6 5.9049 -1.8932 1.2591 16 7 5.6372 -2.4146 2.2300 17 6 7.7759 -1.1376 -0.1329 18 6 8.3444 -2.5280 -0.2539 19 1 7.6859 -3.3839 -0.2394 20 6 9.7053 -2.7074 -0.3843 21 7 10.5071 -1.6652 -0.4025 22 14 10.4098 -4.4308 -0.5351 23 1 9.8438 -5.0936 -1.7375 24 1 11.8873 -4.3522 -0.6621 25 1 10.0587 -5.2169 0.6749 26 1 -0.3634 0.5139 0.8899 27 1 -0.3633 0.5139 -0.8901 28 1 -0.3634 -1.0276 -0.0005 29 1 0.2150 2.3190 0.0098 30 1 5.1412 2.5851 -0.0103 31 1 3.7644 -0.7515 0.0044 32 1 6.0033 0.7290 0.8832 33 1 5.9974 0.7244 -0.8968 34 1 8.1911 -0.6509 0.7497 35 1 8.0339 -0.5609 -1.0211 36 1 11.4646 -1.7915 -0.4939 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000515833677.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:03:21 Heat of formation + Delta-G solvation = -9.101919 kcal Electronic energy + Delta-G solvation = -22131.666716 eV Core-core repulsion = 18474.621860 eV Total energy + Delta-G solvation = -3657.044856 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 328.049 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.58251 -38.14456 -37.54711 -36.57411 -36.35441 -35.00395 -33.67498 -31.92806 -30.39406 -29.33028 -27.46449 -26.55593 -24.07180 -22.58355 -21.87917 -21.77784 -18.66404 -17.67872 -16.95129 -16.78765 -16.37856 -16.04906 -15.66829 -14.94515 -14.66197 -14.51461 -14.22722 -14.16027 -13.72024 -13.21251 -13.06165 -12.93770 -12.46258 -12.18393 -12.17634 -12.02635 -11.91954 -11.68271 -11.47618 -11.20458 -11.17345 -10.97301 -10.90676 -10.81445 -10.66486 -10.42536 -9.88741 -9.73513 -9.37424 -8.77058 -8.53096 -7.35106 -6.17501 -4.21682 0.93164 1.02766 1.79060 2.13351 2.93010 3.26019 3.30674 3.31132 3.33685 3.36141 3.46362 3.53903 4.34213 4.41641 4.59750 4.70986 4.88129 4.89282 5.03959 5.17058 5.20836 5.22113 5.35837 5.39665 5.50407 5.52849 5.81840 5.86940 6.10632 6.18635 6.28796 6.79977 7.21109 7.30013 7.38711 7.61992 7.76159 8.11730 8.27089 8.81975 9.44453 10.93174 Molecular weight = 328.05amu Principal moments of inertia in cm(-1) A = 0.016920 B = 0.002791 C = 0.002465 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1654.408126 B =10029.452506 C =11354.509086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.312 6.312 3 C 0.067 3.933 4 C -0.144 4.144 5 C -0.059 4.059 6 Cl -0.062 7.062 7 C -0.007 4.007 8 Cl -0.053 7.053 9 C -0.156 4.156 10 C 0.225 3.775 11 N -0.731 5.731 12 C 0.125 3.875 13 C -0.002 4.002 14 H 0.109 0.891 15 C 0.236 3.764 16 N -0.464 5.464 17 C 0.035 3.965 18 C -0.531 4.531 19 H 0.057 0.943 20 C 0.065 3.935 21 N -0.889 5.889 22 Si 0.892 3.108 23 H -0.275 1.275 24 H -0.286 1.286 25 H -0.277 1.277 26 H 0.055 0.945 27 H 0.056 0.944 28 H 0.101 0.899 29 H 0.144 0.856 30 H 0.153 0.847 31 H 0.409 0.591 32 H 0.070 0.930 33 H 0.085 0.915 34 H 0.029 0.971 35 H 0.043 0.957 36 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.716 11.695 -2.425 23.052 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.226 6.226 3 C 0.018 3.982 4 C -0.165 4.165 5 C -0.089 4.089 6 Cl -0.034 7.034 7 C -0.036 4.036 8 Cl -0.024 7.024 9 C -0.181 4.181 10 C 0.118 3.882 11 N -0.359 5.359 12 C 0.001 3.999 13 C -0.024 4.024 14 H 0.127 0.873 15 C -0.081 4.081 16 N -0.140 5.140 17 C -0.004 4.004 18 C -0.569 4.569 19 H 0.075 0.925 20 C -0.138 4.138 21 N -0.527 5.527 22 Si 0.720 3.280 23 H -0.200 1.200 24 H -0.211 1.211 25 H -0.202 1.202 26 H 0.074 0.926 27 H 0.075 0.925 28 H 0.119 0.881 29 H 0.161 0.839 30 H 0.170 0.830 31 H 0.245 0.755 32 H 0.088 0.912 33 H 0.103 0.897 34 H 0.047 0.953 35 H 0.061 0.939 36 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -19.632 11.028 -0.972 22.538 hybrid contribution 0.202 -0.716 -0.423 0.855 sum -19.430 10.312 -1.395 22.042 Atomic orbital electron populations 1.23067 0.78070 1.04149 1.01337 1.86051 1.21532 1.25580 1.89428 1.18291 0.90203 0.84779 1.04956 1.20686 1.00313 0.89455 1.06016 1.20034 0.89550 0.87968 1.11358 1.98356 1.72058 1.35769 1.97169 1.20279 0.90339 0.87650 1.05294 1.98380 1.80399 1.26859 1.96770 1.20307 1.00788 0.88027 1.08941 1.17059 0.86997 0.87815 0.96345 1.44903 1.05528 1.05369 1.80144 1.21679 0.78082 0.97308 1.02861 1.19466 1.02384 0.92021 0.88509 0.87301 1.28994 0.91517 0.93035 0.94528 1.80968 1.11022 1.09780 1.12230 1.19156 0.83474 0.98698 0.99080 1.21051 0.92260 0.91963 1.51667 0.92524 1.24938 0.97115 0.96985 0.94776 1.69916 1.04079 1.29413 1.49317 0.86639 0.77979 0.84568 0.78815 1.20002 1.21111 1.20235 0.92614 0.92548 0.88072 0.83874 0.82987 0.75509 0.91168 0.89667 0.95252 0.93905 0.92591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 9.81 101.05 0.99 1.19 16 2 O -0.31 -3.33 9.74 -19.85 -0.19 -3.53 16 3 C 0.07 0.75 6.70 -39.09 -0.26 0.49 16 4 C -0.14 -1.46 8.82 -39.44 -0.35 -1.81 16 5 C -0.06 -0.66 6.32 -39.45 -0.25 -0.91 16 6 Cl -0.06 -0.64 27.94 -51.86 -1.45 -2.09 16 7 C -0.01 -0.08 6.32 -39.47 -0.25 -0.33 16 8 Cl -0.05 -0.60 27.94 -51.86 -1.45 -2.05 16 9 C -0.16 -1.82 9.09 -39.38 -0.36 -2.18 16 10 C 0.22 2.72 6.67 -83.55 -0.56 2.16 16 11 N -0.73 -9.08 5.52 -58.49 -0.32 -9.40 16 12 C 0.13 1.64 4.28 -4.04 -0.02 1.63 16 13 C 0.00 -0.03 2.26 -93.41 -0.21 -0.24 16 14 H 0.11 1.64 8.14 -51.93 -0.42 1.22 16 15 C 0.24 4.49 13.45 -20.82 -0.28 4.21 16 16 N -0.46 -9.74 18.52 42.08 0.78 -8.96 16 17 C 0.03 0.74 4.42 -27.88 -0.12 0.62 16 18 C -0.53 -13.48 8.60 -34.44 -0.30 -13.78 16 19 H 0.06 1.43 7.59 -52.49 -0.40 1.03 16 20 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 21 N -0.89 -24.62 13.29 55.43 0.74 -23.89 16 22 Si 0.89 20.70 29.54 -169.99 -5.02 15.68 16 23 H -0.27 -6.21 7.11 56.52 0.40 -5.81 16 24 H -0.29 -6.57 7.11 56.52 0.40 -6.17 16 25 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 26 H 0.06 0.33 7.65 -51.93 -0.40 -0.07 16 27 H 0.06 0.31 7.68 -51.93 -0.40 -0.08 16 28 H 0.10 0.52 8.14 -51.93 -0.42 0.10 16 29 H 0.14 1.13 6.29 -52.49 -0.33 0.80 16 30 H 0.15 1.65 6.74 -52.49 -0.35 1.30 16 31 H 0.41 5.12 7.58 -40.82 -0.31 4.81 16 32 H 0.07 0.93 7.95 -51.93 -0.41 0.52 16 33 H 0.09 1.00 7.95 -51.93 -0.41 0.59 16 34 H 0.03 0.68 8.14 -51.93 -0.42 0.26 16 35 H 0.04 0.93 8.14 -51.93 -0.42 0.50 16 36 H 0.26 7.00 8.31 -40.82 -0.34 6.66 16 LS Contribution 346.33 15.07 5.22 5.22 Total: -1.00 -29.19 346.33 -7.60 -36.79 By element: Atomic # 1 Polarization: 3.40 SS G_CDS: -3.84 Total: -0.44 kcal Atomic # 6 Polarization: -5.28 SS G_CDS: -2.06 Total: -7.33 kcal Atomic # 7 Polarization: -43.44 SS G_CDS: 1.19 Total: -42.25 kcal Atomic # 8 Polarization: -3.33 SS G_CDS: -0.19 Total: -3.53 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.68 kcal Atomic # 17 Polarization: -1.24 SS G_CDS: -2.90 Total: -4.13 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -29.19 -7.60 -36.79 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000515833677.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.689 kcal (2) G-P(sol) polarization free energy of solvation -29.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -1.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.596 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.791 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.102 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds