Wall clock time and date at job start Tue Mar 31 2020 15:36:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99796 * 2 1 4 4 O 1.20832 * 120.00091 * 0.02562 * 3 2 1 5 5 C 1.50700 * 119.99681 * 180.02562 * 3 2 1 6 6 N 1.46500 * 109.46864 * 180.02562 * 5 3 2 7 7 C 1.36939 * 120.00257 * 264.44116 * 6 5 3 8 8 H 1.07995 * 120.00119 * 202.52354 * 7 6 5 9 9 C 1.38816 * 119.99640 * 22.52718 * 7 6 5 10 10 N 1.31619 * 120.00250 * 7.11067 * 9 7 6 11 11 Si 1.86800 * 119.99836 * 187.11851 * 9 7 6 12 12 H 1.48501 * 109.47276 * 359.97438 * 11 9 7 13 13 H 1.48499 * 109.47105 * 119.99726 * 11 9 7 14 14 H 1.48498 * 109.46798 * 239.99645 * 11 9 7 15 15 C 1.46501 * 119.99994 * 84.44171 * 6 5 3 16 16 C 1.50695 * 109.47344 * 262.03827 * 15 6 5 17 17 C 1.38227 * 119.99343 * 341.54154 * 16 15 6 18 18 C 1.38337 * 119.98794 * 179.97438 * 17 16 15 19 19 Cl 1.73602 * 120.01319 * 179.97438 * 18 17 16 20 20 C 1.38375 * 119.96969 * 359.97438 * 18 17 16 21 21 C 1.38189 * 119.99148 * 0.02562 * 20 18 17 22 22 C 1.38222 * 119.99160 * 161.25840 * 16 15 6 23 23 N 1.48014 * 119.98850 * 0.02562 * 22 16 15 24 24 O 1.21802 * 120.00200 * 185.67987 * 23 22 16 25 25 O 1.21806 * 119.99799 * 5.68243 * 23 22 16 26 26 H 1.09002 * 109.46764 * 299.99388 * 1 2 3 27 27 H 1.08995 * 109.47467 * 59.99991 * 1 2 3 28 28 H 1.09005 * 109.47131 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47025 * 60.00616 * 5 3 2 30 30 H 1.08996 * 109.47673 * 299.99997 * 5 3 2 31 31 H 0.96998 * 119.99713 * 180.02562 * 10 9 7 32 32 H 1.08999 * 109.46910 * 22.04244 * 15 6 5 33 33 H 1.09002 * 109.47041 * 142.03577 * 15 6 5 34 34 H 1.08005 * 120.01095 * 359.95093 * 17 16 15 35 35 H 1.08000 * 120.00236 * 180.02562 * 20 18 17 36 36 H 1.07993 * 119.99481 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2748 -0.0006 6 7 3.9816 2.6797 0.0002 7 6 4.2854 3.3046 -1.1799 8 1 4.9194 4.1789 -1.1804 9 6 3.7785 2.8141 -2.3755 10 7 2.8963 1.8374 -2.3649 11 14 4.3485 3.5403 -3.9994 12 1 5.3361 4.6185 -3.7401 13 1 4.9798 2.4776 -4.8224 14 1 3.1822 4.1024 -4.7268 15 6 4.0720 3.4162 1.2634 16 6 2.8174 4.2267 1.4632 17 6 1.9931 4.5007 0.3880 18 6 0.8411 5.2442 0.5717 19 17 -0.1942 5.5893 -0.7785 20 6 0.5145 5.7128 1.8320 21 6 1.3392 5.4383 2.9062 22 6 2.4880 4.6909 2.7228 23 7 3.3681 4.3924 3.8748 24 8 3.0277 4.7111 5.0000 25 8 4.4329 3.8279 3.6976 26 1 -0.3633 0.5138 0.8901 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3634 -1.0277 -0.0005 29 1 3.9557 0.7810 -0.8909 30 1 3.9565 0.7806 0.8891 31 1 2.5424 1.4945 -3.2004 32 1 4.1846 2.7117 2.0874 33 1 4.9342 4.0824 1.2346 34 1 2.2486 4.1347 -0.5956 35 1 -0.3850 6.2930 1.9761 36 1 1.0846 5.8043 3.8898 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000749156050.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:36:42 Heat of formation + Delta-G solvation = -29.590427 kcal Electronic energy + Delta-G solvation = -27234.005854 eV Core-core repulsion = 23135.363385 eV Total energy + Delta-G solvation = -4098.642469 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 328.070 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.85921 -39.41648 -38.86126 -36.61054 -36.22229 -35.96937 -34.73328 -32.38583 -31.23643 -30.66982 -28.25798 -26.73674 -26.13749 -25.46708 -22.97021 -21.94364 -21.12804 -19.92661 -18.63932 -18.27169 -17.28240 -17.09900 -16.57802 -16.18210 -15.85391 -15.33912 -15.10522 -14.81294 -14.15333 -13.94410 -13.55763 -13.31280 -13.22217 -12.59427 -12.35254 -12.19807 -12.03276 -11.54514 -11.37245 -11.25345 -11.19800 -11.10628 -11.03814 -10.79659 -10.66754 -10.53572 -10.49898 -10.31312 -10.15804 -9.76995 -9.40499 -8.84827 -8.79613 -8.37253 -7.32269 -6.17668 -3.62460 0.22607 1.39734 1.75763 1.80187 2.34784 3.20219 3.29094 3.30151 3.67460 3.69720 3.88688 4.23415 4.71018 4.76191 5.07120 5.12480 5.27570 5.34535 5.60457 5.68726 5.75052 5.92310 5.93759 5.97656 6.11558 6.20290 6.24130 6.37188 6.47546 6.65462 6.87446 6.95280 7.18359 7.45215 7.61306 7.93607 8.05843 8.76640 9.17945 9.40111 9.83861 10.89840 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.010176 B = 0.006211 C = 0.005807 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2750.896766 B = 4506.707197 C = 4820.343412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.045 3.955 2 O -0.378 6.378 3 C 0.469 3.531 4 O -0.510 6.510 5 C 0.187 3.813 6 N -0.568 5.568 7 C -0.266 4.266 8 H 0.083 0.917 9 C 0.011 3.989 10 N -0.902 5.902 11 Si 0.915 3.085 12 H -0.275 1.275 13 H -0.286 1.286 14 H -0.287 1.287 15 C 0.168 3.832 16 C -0.023 4.023 17 C -0.021 4.021 18 C -0.005 4.005 19 Cl -0.060 7.060 20 C -0.126 4.126 21 C -0.073 4.073 22 C -0.056 4.056 23 N 0.040 4.960 24 O -0.190 6.190 25 O -0.162 6.162 26 H 0.044 0.956 27 H 0.053 0.947 28 H 0.080 0.920 29 H 0.125 0.875 30 H 0.051 0.949 31 H 0.263 0.737 32 H 0.089 0.911 33 H 0.083 0.917 34 H 0.195 0.805 35 H 0.141 0.859 36 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.069 2.215 5.178 6.949 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.050 4.050 2 O -0.296 6.296 3 C 0.310 3.690 4 O -0.396 6.396 5 C 0.058 3.942 6 N -0.287 5.287 7 C -0.395 4.395 8 H 0.101 0.899 9 C -0.188 4.188 10 N -0.546 5.546 11 Si 0.744 3.256 12 H -0.200 1.200 13 H -0.212 1.212 14 H -0.214 1.214 15 C 0.041 3.959 16 C -0.028 4.028 17 C -0.040 4.040 18 C -0.032 4.032 19 Cl -0.031 7.031 20 C -0.146 4.146 21 C -0.092 4.092 22 C -0.141 4.141 23 N 0.553 4.447 24 O -0.399 6.399 25 O -0.376 6.376 26 H 0.063 0.937 27 H 0.072 0.928 28 H 0.099 0.901 29 H 0.143 0.857 30 H 0.069 0.931 31 H 0.073 0.927 32 H 0.106 0.894 33 H 0.101 0.899 34 H 0.212 0.788 35 H 0.159 0.841 36 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.844 2.614 4.376 7.032 hybrid contribution -0.442 0.389 -0.805 0.998 sum -5.286 3.003 3.571 7.051 Atomic orbital electron populations 1.22850 0.79613 1.01401 1.01184 1.86535 1.21036 1.36471 1.85525 1.25435 0.93586 0.80231 0.69707 1.90415 1.66883 1.35792 1.46523 1.20404 0.85383 0.86220 1.02173 1.44116 1.75154 1.06887 1.02553 1.19388 1.24708 1.12136 0.83219 0.89915 1.25029 0.96619 0.98428 0.98772 1.69643 1.30047 1.28253 1.26657 0.86018 0.78091 0.78628 0.82895 1.19979 1.21198 1.21404 1.20609 0.91205 0.94354 0.89708 1.21332 0.99929 0.92858 0.88662 1.21795 0.89284 0.89950 1.02979 1.21344 0.93791 0.99255 0.88795 1.98366 1.66192 1.93477 1.45047 1.20836 1.00752 1.02682 0.90290 1.20606 0.91814 0.96512 1.00284 1.21094 0.95890 1.10679 0.86449 1.43624 1.00889 0.97959 1.02243 1.94471 1.78987 1.56738 1.09719 1.94481 1.10641 1.40870 1.91637 0.93740 0.92799 0.90111 0.85738 0.93082 0.92664 0.89366 0.89933 0.78773 0.84106 0.83505 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.74 10.56 101.05 1.07 1.81 16 2 O -0.38 -7.64 10.57 -39.25 -0.41 -8.05 16 3 C 0.47 10.25 6.03 36.01 0.22 10.47 16 4 O -0.51 -11.79 11.09 -18.75 -0.21 -12.00 16 5 C 0.19 3.94 5.51 -5.19 -0.03 3.91 16 6 N -0.57 -12.20 1.76 -175.98 -0.31 -12.51 16 7 C -0.27 -6.15 7.57 -15.06 -0.11 -6.26 16 8 H 0.08 1.90 7.84 -52.49 -0.41 1.49 16 9 C 0.01 0.25 4.96 -17.43 -0.09 0.17 16 10 N -0.90 -22.23 8.68 55.49 0.48 -21.75 16 11 Si 0.91 19.62 29.56 -169.99 -5.02 14.60 16 12 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 13 H -0.29 -6.21 7.11 56.52 0.40 -5.81 16 14 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 15 C 0.17 3.25 4.57 -5.20 -0.02 3.23 16 16 C -0.02 -0.44 5.37 -104.63 -0.56 -1.00 16 17 C -0.02 -0.43 5.91 -39.55 -0.23 -0.66 16 18 C 0.00 -0.08 6.32 -39.49 -0.25 -0.33 16 19 Cl -0.06 -1.01 28.96 -51.86 -1.50 -2.51 16 20 C -0.13 -1.88 9.83 -39.55 -0.39 -2.27 16 21 C -0.07 -1.11 9.56 -39.59 -0.38 -1.49 16 22 C -0.06 -1.00 6.83 -79.94 -0.55 -1.55 16 23 N 0.04 0.72 4.45 33.96 0.15 0.87 16 24 O -0.19 -3.39 18.46 -29.46 -0.54 -3.93 16 25 O -0.16 -2.97 15.42 -29.46 -0.45 -3.42 16 26 H 0.04 0.72 8.13 -51.93 -0.42 0.30 16 27 H 0.05 0.95 8.13 -51.93 -0.42 0.53 16 28 H 0.08 1.06 8.14 -51.93 -0.42 0.64 16 29 H 0.13 2.82 6.37 -51.93 -0.33 2.49 16 30 H 0.05 0.95 7.94 -51.93 -0.41 0.54 16 31 H 0.26 6.51 8.31 -40.82 -0.34 6.17 16 32 H 0.09 1.66 5.90 -51.93 -0.31 1.36 16 33 H 0.08 1.55 8.06 -51.93 -0.42 1.13 16 34 H 0.20 4.56 4.55 -52.48 -0.24 4.32 16 35 H 0.14 1.66 8.06 -52.49 -0.42 1.23 16 36 H 0.15 1.89 7.62 -52.49 -0.40 1.49 16 LS Contribution 322.37 15.07 4.86 4.86 Total: -1.00 -25.72 322.37 -7.64 -33.36 By element: Atomic # 1 Polarization: 7.82 SS G_CDS: -3.34 Total: 4.47 kcal Atomic # 6 Polarization: 7.35 SS G_CDS: -1.33 Total: 6.02 kcal Atomic # 7 Polarization: -33.72 SS G_CDS: 0.32 Total: -33.40 kcal Atomic # 8 Polarization: -25.79 SS G_CDS: -1.62 Total: -27.41 kcal Atomic # 14 Polarization: 19.62 SS G_CDS: -5.02 Total: 14.60 kcal Atomic # 17 Polarization: -1.01 SS G_CDS: -1.50 Total: -2.51 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -25.72 -7.64 -33.36 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000749156050.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.773 kcal (2) G-P(sol) polarization free energy of solvation -25.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.590 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds