Wall clock time and date at job start Tue Mar 31 2020 14:54:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31005 * 1 3 3 C 1.50701 * 120.00449 * 2 1 4 4 N 1.46497 * 109.46905 * 123.80523 * 3 2 1 5 5 C 1.46503 * 119.99658 * 85.28043 * 4 3 2 6 6 C 1.50705 * 109.47351 * 89.99705 * 5 4 3 7 7 H 1.08002 * 119.99696 * 359.97438 * 6 5 4 8 8 C 1.37874 * 120.00005 * 179.97438 * 6 5 4 9 9 N 1.31518 * 120.00123 * 0.02562 * 8 6 5 10 10 Si 1.86800 * 119.99748 * 179.97438 * 8 6 5 11 11 H 1.48507 * 109.46931 * 90.00472 * 10 8 6 12 12 H 1.48500 * 109.46970 * 210.00010 * 10 8 6 13 13 H 1.48492 * 109.47416 * 330.00398 * 10 8 6 14 14 C 1.34773 * 120.00651 * 265.27548 * 4 3 2 15 15 O 1.21564 * 119.99548 * 4.63123 * 14 4 3 16 16 C 1.47779 * 120.00561 * 184.63225 * 14 4 3 17 17 C 1.40086 * 120.53783 * 301.55566 * 16 14 4 18 18 C 1.38358 * 118.29356 * 179.97438 * 17 16 14 19 19 Cl 1.73598 * 120.36255 * 179.97438 * 18 17 16 20 20 C 1.38672 * 119.27005 * 359.97438 * 18 17 16 21 21 Cl 1.73593 * 119.48655 * 180.02562 * 20 18 17 22 22 N 1.32031 * 121.02798 * 0.02562 * 20 18 17 23 23 C 1.31690 * 121.87460 * 359.72423 * 22 20 18 24 24 C 1.50700 * 119.69649 * 180.28856 * 23 22 20 25 25 H 1.08007 * 119.99489 * 5.02969 * 1 2 3 26 26 H 1.07996 * 120.00398 * 185.03402 * 1 2 3 27 27 H 1.08004 * 119.99709 * 180.02562 * 2 1 3 28 28 H 1.08996 * 109.46550 * 3.80977 * 3 2 1 29 29 H 1.08996 * 109.47183 * 243.81096 * 3 2 1 30 30 H 1.08999 * 109.47194 * 209.99658 * 5 4 3 31 31 H 1.09001 * 109.47504 * 329.99623 * 5 4 3 32 32 H 0.96995 * 120.00028 * 179.97438 * 9 8 6 33 33 H 1.08002 * 120.84917 * 359.94654 * 17 16 14 34 34 H 1.09000 * 109.47289 * 274.55881 * 24 23 22 35 35 H 1.09007 * 109.46771 * 34.55871 * 24 23 22 36 36 H 1.09002 * 109.47096 * 154.55326 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0637 1.3050 0.0000 4 7 2.9733 1.3436 1.1477 5 6 4.3055 0.7425 1.0469 6 6 5.2867 1.7753 0.5550 7 1 4.9514 2.7788 0.3387 8 6 6.6125 1.4389 0.3812 9 7 7.0207 0.2166 0.6441 10 14 7.8285 2.7188 -0.2291 11 1 8.4193 3.4331 0.9311 12 1 8.9070 2.0492 -0.9996 13 1 7.1260 3.6916 -1.1039 14 6 2.5847 1.9320 2.2962 15 8 1.4510 2.3560 2.4086 16 6 3.5368 2.0620 3.4190 17 6 4.1356 0.9263 3.9795 18 6 5.0205 1.1017 5.0286 19 17 5.7926 -0.2684 5.7636 20 6 5.2836 2.3839 5.4864 21 17 6.3933 2.6105 6.8019 22 7 4.7033 3.4351 4.9374 23 6 3.8584 3.3181 3.9340 24 6 3.2291 4.5519 3.3401 25 1 -0.5400 0.9318 -0.0820 26 1 -0.5400 -0.9316 0.0821 27 1 1.8500 -0.9354 -0.0004 28 1 1.3573 2.1323 0.0683 29 1 2.6381 1.3929 -0.9221 30 1 4.6173 0.3833 2.0276 31 1 4.2755 -0.0925 0.3469 32 1 7.9533 -0.0201 0.5215 33 1 3.9120 -0.0608 3.6026 34 1 2.3413 4.8189 3.9134 35 1 3.9431 5.3749 3.3716 36 1 2.9478 4.3543 2.3057 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000848119968.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:54:15 Heat of formation + Delta-G solvation = 9.454873 kcal Electronic energy + Delta-G solvation = -23710.641425 eV Core-core repulsion = 20054.401252 eV Total energy + Delta-G solvation = -3656.240173 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 328.049 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -40.66776 -38.85355 -36.67810 -36.50465 -35.66983 -33.78602 -32.75373 -32.35474 -31.86391 -27.81482 -27.54624 -25.99674 -24.18166 -22.93181 -22.36797 -20.03494 -19.04856 -17.38073 -17.11094 -16.59905 -16.40395 -16.02481 -14.96814 -14.86864 -14.57292 -14.33169 -13.86449 -13.74136 -13.21998 -13.04589 -12.88040 -12.50616 -12.40622 -12.04887 -11.93097 -11.75592 -11.42624 -11.40060 -11.21740 -11.14819 -10.90188 -10.86839 -10.82929 -10.32644 -10.00261 -9.86617 -9.56291 -9.36931 -9.08052 -8.62208 -8.55231 -7.96767 -6.27872 -4.35043 0.73876 1.10811 1.75593 2.06126 2.44284 2.98351 3.18269 3.26008 3.27984 3.49786 3.86925 4.25433 4.39698 4.67704 4.77910 4.99292 5.07030 5.20592 5.30917 5.44351 5.59873 5.76363 5.81126 5.84055 6.00929 6.06588 6.09568 6.19804 6.43223 6.48072 6.82829 6.96378 7.00577 7.27745 7.64659 7.67731 7.91341 8.03595 8.56546 8.73781 9.32769 10.78912 Molecular weight = 328.05amu Principal moments of inertia in cm(-1) A = 0.009189 B = 0.006015 C = 0.004764 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3046.528249 B = 4653.992400 C = 5875.715312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.185 4.185 2 C -0.162 4.162 3 C 0.144 3.856 4 N -0.579 5.579 5 C 0.226 3.774 6 C -0.540 4.540 7 H 0.061 0.939 8 C 0.070 3.930 9 N -0.885 5.885 10 Si 0.892 3.108 11 H -0.278 1.278 12 H -0.283 1.283 13 H -0.272 1.272 14 C 0.567 3.433 15 O -0.552 6.552 16 C -0.132 4.132 17 C -0.007 4.007 18 C -0.081 4.081 19 Cl -0.037 7.037 20 C 0.198 3.802 21 Cl -0.019 7.019 22 N -0.468 5.468 23 C 0.195 3.805 24 C -0.100 4.100 25 H 0.096 0.904 26 H 0.093 0.907 27 H 0.109 0.891 28 H 0.081 0.919 29 H 0.089 0.911 30 H 0.043 0.957 31 H 0.042 0.958 32 H 0.267 0.733 33 H 0.159 0.841 34 H 0.087 0.913 35 H 0.081 0.919 36 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.628 0.577 5.798 8.101 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C -0.181 4.181 3 C 0.021 3.979 4 N -0.308 5.308 5 C 0.107 3.893 6 C -0.578 4.578 7 H 0.079 0.921 8 C -0.134 4.134 9 N -0.522 5.522 10 Si 0.719 3.281 11 H -0.204 1.204 12 H -0.209 1.209 13 H -0.196 1.196 14 C 0.353 3.647 15 O -0.432 6.432 16 C -0.137 4.137 17 C -0.033 4.033 18 C -0.112 4.112 19 Cl -0.008 7.008 20 C 0.032 3.968 21 Cl 0.009 6.991 22 N -0.180 5.180 23 C 0.056 3.944 24 C -0.157 4.157 25 H 0.114 0.886 26 H 0.111 0.889 27 H 0.127 0.873 28 H 0.099 0.901 29 H 0.107 0.893 30 H 0.060 0.940 31 H 0.060 0.940 32 H 0.076 0.924 33 H 0.177 0.823 34 H 0.105 0.895 35 H 0.100 0.900 36 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -5.659 1.388 6.320 8.596 hybrid contribution 1.144 -0.519 -0.525 1.361 sum -4.515 0.869 5.794 7.397 Atomic orbital electron populations 1.23764 0.95825 1.01540 1.01105 1.23366 0.96130 0.99300 0.99322 1.20446 0.92644 0.95201 0.89593 1.48185 1.17337 1.54609 1.10698 1.19753 0.76373 0.94292 0.98874 1.21384 0.92967 0.97392 1.46101 0.92062 1.24892 0.98174 0.95453 0.94919 1.69893 1.16948 1.17936 1.47461 0.86579 0.80867 0.81531 0.79144 1.20364 1.20904 1.19639 1.17761 0.86141 0.78321 0.82507 1.90736 1.19462 1.50806 1.82190 1.20717 1.00228 0.93829 0.98935 1.21539 0.90857 1.00190 0.90718 1.21317 1.01589 0.88549 0.99701 1.98378 1.79678 1.41459 1.81311 1.21460 0.94373 0.88135 0.92785 1.98399 1.59012 1.97605 1.44039 1.66931 1.09330 1.31197 1.10509 1.21139 0.90001 0.94336 0.88893 1.20769 1.00502 0.93286 1.01183 0.88598 0.88852 0.87345 0.90059 0.89315 0.93972 0.94004 0.92371 0.82331 0.89471 0.89981 0.89929 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.44 14.31 29.01 0.42 -2.03 16 2 C -0.16 -2.43 9.84 -36.03 -0.35 -2.78 16 3 C 0.14 2.42 5.87 -5.19 -0.03 2.39 16 4 N -0.58 -11.22 2.44 -177.57 -0.43 -11.66 16 5 C 0.23 4.98 4.94 -5.19 -0.03 4.96 16 6 C -0.54 -13.33 9.38 -34.44 -0.32 -13.66 16 7 H 0.06 1.54 7.81 -52.49 -0.41 1.13 16 8 C 0.07 1.78 5.46 -17.82 -0.10 1.69 16 9 N -0.88 -23.46 13.29 55.43 0.74 -22.72 16 10 Si 0.89 20.30 29.54 -169.99 -5.02 15.27 16 11 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 12 H -0.28 -6.41 7.11 56.52 0.40 -6.01 16 13 H -0.27 -6.09 7.11 56.52 0.40 -5.69 16 14 C 0.57 11.02 5.91 -12.36 -0.07 10.94 16 15 O -0.55 -11.23 15.87 5.31 0.08 -11.15 16 16 C -0.13 -2.48 5.02 -104.83 -0.53 -3.01 16 17 C -0.01 -0.12 7.62 -38.84 -0.30 -0.41 16 18 C -0.08 -1.41 6.34 -39.38 -0.25 -1.66 16 19 Cl -0.04 -0.57 27.97 -51.86 -1.45 -2.02 16 20 C 0.20 3.48 7.28 -17.31 -0.13 3.35 16 21 Cl -0.02 -0.29 28.10 -51.86 -1.46 -1.75 16 22 N -0.47 -8.51 10.24 -6.25 -0.06 -8.57 16 23 C 0.19 3.53 6.82 -82.18 -0.56 2.97 16 24 C -0.10 -1.55 9.53 36.01 0.34 -1.21 16 25 H 0.10 1.23 7.85 -52.48 -0.41 0.82 16 26 H 0.09 1.07 8.06 -52.49 -0.42 0.65 16 27 H 0.11 1.61 8.06 -52.48 -0.42 1.18 16 28 H 0.08 1.34 7.01 -51.93 -0.36 0.98 16 29 H 0.09 1.47 8.11 -51.93 -0.42 1.05 16 30 H 0.04 0.95 4.25 -51.93 -0.22 0.73 16 31 H 0.04 0.96 8.07 -51.93 -0.42 0.55 16 32 H 0.27 6.81 8.31 -40.82 -0.34 6.48 16 33 H 0.16 2.66 7.13 -52.49 -0.37 2.28 16 34 H 0.09 1.20 8.14 -51.93 -0.42 0.78 16 35 H 0.08 1.15 8.14 -51.93 -0.42 0.73 16 36 H 0.08 1.35 6.71 -51.93 -0.35 1.00 16 LS Contribution 344.73 15.07 5.20 5.20 Total: -1.00 -27.12 344.73 -8.11 -35.23 By element: Atomic # 1 Polarization: 4.42 SS G_CDS: -3.80 Total: 0.63 kcal Atomic # 6 Polarization: 3.45 SS G_CDS: -1.90 Total: 1.54 kcal Atomic # 7 Polarization: -43.19 SS G_CDS: 0.24 Total: -42.95 kcal Atomic # 8 Polarization: -11.23 SS G_CDS: 0.08 Total: -11.15 kcal Atomic # 14 Polarization: 20.30 SS G_CDS: -5.02 Total: 15.27 kcal Atomic # 17 Polarization: -0.86 SS G_CDS: -2.91 Total: -3.77 kcal Total LS contribution 5.20 Total: 5.20 kcal Total: -27.12 -8.11 -35.23 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000848119968.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 44.687 kcal (2) G-P(sol) polarization free energy of solvation -27.123 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 17.564 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.109 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.233 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.455 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds