Wall clock time and date at job start Tue Mar 31 2020 15:34:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35858 * 116.99994 * 2 1 4 4 C 1.39092 * 119.88027 * 89.99977 * 3 2 1 5 5 F 1.35109 * 119.94374 * 359.97438 * 4 3 2 6 6 C 1.38108 * 120.11979 * 180.02562 * 4 3 2 7 7 F 1.35100 * 120.05965 * 179.97438 * 6 4 3 8 8 C 1.40091 * 119.87746 * 359.97438 * 6 4 3 9 9 C 1.47450 * 120.11689 * 180.02562 * 8 6 4 10 10 N 1.33100 * 120.56200 * 304.79107 * 9 8 6 11 11 C 1.31887 * 120.02852 * 180.02562 * 10 9 8 12 12 C 1.39025 * 121.23666 * 359.97438 * 11 10 9 13 13 N 1.31522 * 121.15251 * 0.02562 * 12 11 10 14 14 C 1.34092 * 119.86938 * 0.02562 * 13 12 11 15 15 C 1.40672 * 120.59245 * 180.02562 * 14 13 12 16 16 H 1.07993 * 120.00339 * 171.86329 * 15 14 13 17 17 C 1.40139 * 119.99516 * 351.86557 * 15 14 13 18 18 N 1.30718 * 120.00033 * 359.97438 * 17 15 14 19 19 Si 1.86796 * 119.99955 * 179.97438 * 17 15 14 20 20 H 1.48501 * 109.47148 * 60.00302 * 19 17 15 21 21 H 1.48498 * 109.46987 * 179.97438 * 19 17 15 22 22 H 1.48500 * 109.47386 * 300.00153 * 19 17 15 23 23 C 1.40095 * 119.76506 * 0.28109 * 8 6 4 24 24 F 1.35095 * 120.06297 * 179.70234 * 23 8 6 25 25 C 1.38112 * 119.87557 * 359.46356 * 23 8 6 26 26 F 1.35099 * 119.93779 * 180.27690 * 25 23 8 27 27 H 1.09000 * 109.47261 * 59.99783 * 1 2 3 28 28 H 1.08996 * 109.46835 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47098 * 299.99680 * 1 2 3 30 30 H 1.08001 * 119.38318 * 180.02562 * 11 10 9 31 31 H 1.08000 * 119.42485 * 179.74094 * 12 11 10 32 32 H 0.96998 * 119.99670 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0458 1.2105 0.0000 4 6 2.3604 1.8279 1.2060 5 9 2.0516 1.2230 2.3740 6 6 2.9869 3.0587 1.2118 7 9 3.2914 3.6575 2.3839 8 6 3.3060 3.6850 0.0000 9 6 3.9754 4.9988 0.0000 10 7 3.4440 6.0291 0.6540 11 6 4.0515 7.1997 0.6465 12 6 5.2484 7.3866 -0.0355 13 7 5.8154 6.4014 -0.6973 14 6 5.2362 5.1923 -0.7207 15 6 5.8295 4.1277 -1.4232 16 1 5.4291 3.1291 -1.3296 17 6 6.9404 4.3631 -2.2445 18 7 7.4248 5.5718 -2.3581 19 14 7.7289 2.9494 -3.1768 20 1 6.7294 2.3408 -4.0910 21 1 8.8777 3.4582 -3.9683 22 1 8.2059 1.9256 -2.2127 23 6 2.9820 3.0611 -1.2118 24 9 3.2816 3.6625 -2.3839 25 6 2.3603 1.8279 -1.2060 26 9 2.0524 1.2226 -2.3739 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 3.6113 8.0286 1.1810 31 1 5.7186 8.3588 -0.0256 32 1 8.1935 5.7347 -2.9269 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001242730673.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:34:44 Heat of formation + Delta-G solvation = -140.306540 kcal Electronic energy + Delta-G solvation = -28237.908282 eV Core-core repulsion = 23471.580606 eV Total energy + Delta-G solvation = -4766.327676 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 328.058 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -49.29604 -49.22032 -48.28715 -48.21380 -39.49946 -38.85576 -36.96872 -34.40740 -32.55675 -31.32232 -29.65434 -29.05907 -27.18117 -26.22902 -23.87260 -22.91459 -22.10955 -21.43859 -18.57387 -18.47319 -18.00278 -17.85355 -16.87822 -16.44534 -16.30833 -16.18422 -15.62179 -15.50343 -15.31512 -15.24997 -15.02515 -14.64923 -14.52271 -14.43931 -14.34101 -13.97394 -13.12443 -13.07183 -12.92506 -12.62080 -12.09158 -11.93253 -11.76469 -11.53311 -11.49421 -11.04575 -10.90507 -10.56892 -10.30009 -10.10172 -9.84766 -9.42236 -8.77155 -8.42919 -7.87571 -7.64456 -6.85082 -5.02489 0.58559 0.78139 2.14398 2.69814 2.87529 2.90343 2.97041 3.07605 3.24770 3.63527 3.73609 4.00256 4.20809 4.36462 4.62348 4.63563 5.12510 5.12754 5.13599 5.37642 5.42467 5.43240 5.53818 5.77278 5.79295 6.06008 6.14948 6.25099 6.46848 6.61775 6.68118 6.82061 7.17125 7.37617 7.67511 8.03534 8.31468 8.93108 9.52852 9.75958 Molecular weight = 328.06amu Principal moments of inertia in cm(-1) A = 0.012383 B = 0.006001 C = 0.004648 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2260.660390 B = 4664.710696 C = 6022.822434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.311 6.311 3 C 0.055 3.945 4 C 0.065 3.935 5 F -0.116 7.116 6 C 0.105 3.895 7 F -0.105 7.105 8 C 0.023 3.977 9 C -0.071 4.071 10 N -0.389 5.389 11 C -0.118 4.118 12 C 0.106 3.894 13 N -0.452 5.452 14 C 0.230 3.770 15 C -0.370 4.370 16 H 0.090 0.910 17 C 0.063 3.937 18 N -0.689 5.689 19 Si 0.912 3.088 20 H -0.255 1.255 21 H -0.270 1.270 22 H -0.257 1.257 23 C 0.110 3.890 24 F -0.095 7.095 25 C 0.066 3.934 26 F -0.114 7.114 27 H 0.052 0.948 28 H 0.101 0.899 29 H 0.052 0.948 30 H 0.132 0.868 31 H 0.134 0.866 32 H 0.286 0.714 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.063 -6.503 1.050 9.658 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.227 6.227 3 C 0.009 3.991 4 C 0.044 3.956 5 F -0.094 7.094 6 C 0.083 3.917 7 F -0.083 7.083 8 C 0.019 3.981 9 C -0.217 4.217 10 N -0.101 5.101 11 C -0.281 4.281 12 C -0.067 4.067 13 N -0.168 5.168 14 C 0.106 3.894 15 C -0.398 4.398 16 H 0.108 0.892 17 C -0.167 4.167 18 N -0.307 5.307 19 Si 0.734 3.266 20 H -0.179 1.179 21 H -0.194 1.194 22 H -0.181 1.181 23 C 0.088 3.912 24 F -0.073 7.073 25 C 0.045 3.955 26 F -0.092 7.092 27 H 0.071 0.929 28 H 0.119 0.881 29 H 0.070 0.930 30 H 0.150 0.850 31 H 0.152 0.848 32 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -6.760 -6.537 0.903 9.447 hybrid contribution 0.201 -0.255 -0.334 0.466 sum -6.559 -6.792 0.569 9.460 Atomic orbital electron populations 1.23174 0.78252 1.03853 1.01274 1.86118 1.20553 1.22140 1.93919 1.17745 1.03420 0.89111 0.88870 1.17363 1.04687 0.91772 0.81770 1.91522 1.91024 1.82454 1.44408 1.17152 1.01679 0.90315 0.82562 1.91564 1.90574 1.82656 1.43524 1.18041 0.96477 0.94985 0.88590 1.20365 0.98441 0.91133 1.11717 1.67678 1.31168 0.99170 1.12048 1.22429 0.99205 0.95467 1.11001 1.23506 0.92789 0.98518 0.91894 1.69577 1.30116 0.99001 1.18074 1.20176 0.87781 0.91614 0.89850 1.19670 1.07945 0.94945 1.17286 0.89166 1.26241 0.96488 0.97292 0.96679 1.70013 1.15778 1.21036 1.23858 0.86247 0.79381 0.80886 0.80117 1.17915 1.19410 1.18073 1.17183 1.00474 0.90784 0.82771 1.91633 1.90273 1.82256 1.43108 1.17377 1.04769 0.91578 0.81805 1.91527 1.91011 1.82338 1.44346 0.92926 0.88106 0.92964 0.85008 0.84818 0.90248 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.30 11.13 101.05 1.12 1.42 16 2 O -0.31 -4.59 10.12 -19.29 -0.20 -4.79 16 3 C 0.06 0.90 5.74 -38.95 -0.22 0.68 16 4 C 0.07 1.12 7.30 -39.31 -0.29 0.83 16 5 F -0.12 -1.90 17.01 2.25 0.04 -1.86 16 6 C 0.10 2.03 7.28 -38.93 -0.28 1.75 16 7 F -0.11 -2.15 16.58 2.25 0.04 -2.11 16 8 C 0.02 0.48 5.02 -104.75 -0.53 -0.04 16 9 C -0.07 -1.71 5.90 -80.24 -0.47 -2.18 16 10 N -0.39 -9.24 10.25 -7.88 -0.08 -9.32 16 11 C -0.12 -2.57 11.17 -17.24 -0.19 -2.77 16 12 C 0.11 2.37 11.17 -17.39 -0.19 2.18 16 13 N -0.45 -11.58 8.12 -9.55 -0.08 -11.66 16 14 C 0.23 5.89 6.45 -82.63 -0.53 5.36 16 15 C -0.37 -9.08 7.33 -37.95 -0.28 -9.36 16 16 H 0.09 2.10 5.99 -52.49 -0.31 1.78 16 17 C 0.06 1.46 5.50 -17.31 -0.10 1.36 16 18 N -0.69 -16.54 11.54 55.56 0.64 -15.90 16 19 Si 0.91 17.12 29.56 -169.99 -5.02 12.09 16 20 H -0.26 -4.78 7.11 56.52 0.40 -4.38 16 21 H -0.27 -4.84 7.11 56.52 0.40 -4.44 16 22 H -0.26 -4.76 7.11 56.52 0.40 -4.36 16 23 C 0.11 2.17 5.89 -38.93 -0.23 1.94 16 24 F -0.09 -2.02 15.00 2.25 0.03 -1.99 16 25 C 0.07 1.14 7.30 -39.31 -0.29 0.86 16 26 F -0.11 -1.91 17.01 2.25 0.04 -1.87 16 27 H 0.05 0.52 8.14 -51.93 -0.42 0.10 16 28 H 0.10 0.78 8.14 -51.93 -0.42 0.36 16 29 H 0.05 0.51 8.14 -51.93 -0.42 0.09 16 30 H 0.13 2.44 8.06 -52.49 -0.42 2.01 16 31 H 0.13 2.50 8.06 -52.49 -0.42 2.07 16 32 H 0.29 6.13 8.29 -40.82 -0.34 5.79 16 LS Contribution 308.50 15.07 4.65 4.65 Total: -1.00 -27.72 308.50 -3.98 -31.71 By element: Atomic # 1 Polarization: 0.60 SS G_CDS: -1.56 Total: -0.96 kcal Atomic # 6 Polarization: 4.50 SS G_CDS: -2.48 Total: 2.02 kcal Atomic # 7 Polarization: -37.36 SS G_CDS: 0.48 Total: -36.88 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -0.20 Total: -4.79 kcal Atomic # 9 Polarization: -7.99 SS G_CDS: 0.15 Total: -7.84 kcal Atomic # 14 Polarization: 17.12 SS G_CDS: -5.02 Total: 12.09 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -27.72 -3.98 -31.71 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001242730673.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.601 kcal (2) G-P(sol) polarization free energy of solvation -27.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -136.325 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.981 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.706 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.307 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds