Wall clock time and date at job start Tue Mar 31 2020 15:22:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.43203 * 179.97438 * 2 1 4 4 C 1.39842 * 120.08182 * 12.33359 * 3 2 1 5 5 C 1.37609 * 119.93045 * 180.02562 * 4 3 2 6 6 C 1.39230 * 120.11281 * 0.02562 * 5 4 3 7 7 N 1.39185 * 119.91706 * 179.97438 * 6 5 4 8 8 C 1.46496 * 120.00214 * 179.97438 * 7 6 5 9 9 C 1.50701 * 109.47294 * 180.02562 * 8 7 6 10 10 C 1.38300 * 119.92722 * 269.72913 * 9 8 7 11 11 C 1.38106 * 120.06640 * 179.72130 * 10 9 8 12 12 C 1.38884 * 119.92848 * 0.57325 * 11 10 9 13 13 O 1.35747 * 120.06732 * 179.68192 * 12 11 10 14 14 C 1.34830 * 117.00034 * 174.48794 * 13 12 11 15 15 H 1.08007 * 119.99782 * 5.04841 * 14 13 12 16 16 C 1.38652 * 120.00117 * 185.05708 * 14 13 12 17 17 N 1.31551 * 120.00200 * 359.97438 * 16 14 13 18 18 Si 1.86804 * 120.00066 * 179.97438 * 16 14 13 19 19 H 1.48500 * 109.46857 * 59.99586 * 18 16 14 20 20 H 1.48494 * 109.47321 * 179.97438 * 18 16 14 21 21 H 1.48503 * 109.47107 * 300.00309 * 18 16 14 22 22 C 1.38882 * 119.86331 * 359.69851 * 12 11 10 23 23 C 1.38099 * 119.92971 * 0.02562 * 22 12 11 24 24 C 1.39095 * 120.16760 * 0.25649 * 6 5 4 25 25 C 1.37825 * 120.06618 * 359.44584 * 24 6 5 26 26 Cl 1.73603 * 120.05790 * 180.27469 * 25 24 6 27 27 H 1.07992 * 120.03665 * 359.97438 * 4 3 2 28 28 H 1.08002 * 119.94287 * 179.97438 * 5 4 3 29 29 H 0.97007 * 119.99625 * 0.02562 * 7 6 5 30 30 H 1.08996 * 109.47094 * 300.00144 * 8 7 6 31 31 H 1.09001 * 109.47027 * 60.00120 * 8 7 6 32 32 H 1.08003 * 119.96820 * 359.97438 * 10 9 8 33 33 H 1.07997 * 120.03885 * 180.27264 * 11 10 9 34 34 H 0.97001 * 120.00383 * 180.02562 * 17 16 14 35 35 H 1.07991 * 120.03668 * 179.97438 * 22 12 11 36 36 H 1.07998 * 119.96642 * 179.97438 * 23 22 12 37 37 H 1.08006 * 119.96622 * 179.70051 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2695 -1.1812 -0.2585 5 6 4.6456 -1.1771 -0.2572 6 6 5.3404 0.0014 0.0015 7 7 6.7322 0.0007 0.0024 8 6 7.4652 1.2397 0.2738 9 6 8.9467 0.9701 0.2152 10 6 9.6257 0.5959 1.3604 11 6 10.9824 0.3425 1.3089 12 6 11.6669 0.4755 0.1078 13 8 13.0016 0.2334 0.0553 14 6 13.5828 0.2692 -1.1608 15 1 13.0070 0.5630 -2.0261 16 6 14.9196 -0.0713 -1.3006 17 7 15.6210 -0.4288 -0.2467 18 14 15.7246 -0.0224 -2.9856 19 1 15.6465 1.3564 -3.5316 20 1 17.1484 -0.4270 -2.8659 21 1 15.0189 -0.9570 -3.8987 22 6 10.9832 0.8570 -1.0393 23 6 9.6256 1.1034 -0.9824 24 6 4.6471 1.1781 0.2650 25 6 3.2689 1.1835 0.2594 26 17 2.4039 2.6539 0.5812 27 1 2.7319 -2.0963 -0.4581 28 1 5.1875 -2.0898 -0.4564 29 1 7.2169 -0.8201 -0.1776 30 1 7.2027 1.9883 -0.4737 31 1 7.2015 1.6081 1.2652 32 1 9.0938 0.4976 2.2952 33 1 11.5113 0.0460 2.2025 34 1 16.5563 -0.6667 -0.3444 35 1 11.5128 0.9617 -1.9746 36 1 9.0934 1.4004 -1.8740 37 1 5.1894 2.0894 0.4700 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037253264.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:22:51 Heat of formation + Delta-G solvation = 44.556245 kcal Electronic energy + Delta-G solvation = -22645.262126 eV Core-core repulsion = 18992.976912 eV Total energy + Delta-G solvation = -3652.285214 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 328.072 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.09549 -39.24323 -37.52339 -36.82705 -36.61111 -35.16475 -32.51824 -31.32364 -31.08797 -30.37747 -28.89448 -26.03435 -25.00428 -23.36328 -22.63281 -22.16974 -20.66291 -19.27642 -18.18989 -17.87144 -17.15002 -16.45955 -15.28367 -15.14159 -14.94671 -14.65412 -14.56758 -14.30439 -14.18180 -13.98268 -13.82994 -13.74271 -13.41912 -12.91382 -12.88874 -12.88231 -12.53267 -12.44578 -11.93633 -11.72988 -11.68679 -11.44746 -11.28981 -10.98903 -10.91490 -10.81654 -10.57209 -10.23254 -9.52095 -9.25798 -8.99390 -8.40282 -7.77503 -7.44976 -6.60823 -4.20069 0.57701 0.89805 1.67946 1.93825 2.02222 2.52870 2.75498 3.03202 3.03971 3.07883 3.29755 3.56291 3.75961 3.83643 4.37961 4.42081 4.74742 4.88124 4.93381 4.96538 5.07529 5.12326 5.19526 5.31506 5.51077 5.53840 5.62633 5.66012 5.80281 5.89668 6.01549 6.18012 6.22459 6.48028 6.68682 6.84359 6.93673 7.02713 7.14563 7.25512 7.35462 7.43157 7.60395 7.83210 8.84084 9.50842 10.56232 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.029186 B = 0.001905 C = 0.001880 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 959.145761 B =14698.251423 C =14891.620517 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.428 5.428 2 C 0.264 3.736 3 C -0.104 4.104 4 C -0.006 4.006 5 C -0.201 4.201 6 C 0.267 3.733 7 N -0.718 5.718 8 C 0.175 3.825 9 C -0.220 4.220 10 C -0.052 4.052 11 C -0.196 4.196 12 C 0.161 3.839 13 O -0.171 6.171 14 C -0.395 4.395 15 H 0.094 0.906 16 C 0.041 3.959 17 N -0.857 5.857 18 Si 0.943 3.057 19 H -0.269 1.269 20 H -0.277 1.277 21 H -0.269 1.269 22 C -0.238 4.238 23 C -0.049 4.049 24 C -0.200 4.200 25 C 0.063 3.937 26 Cl -0.058 7.058 27 H 0.139 0.861 28 H 0.137 0.863 29 H 0.409 0.591 30 H 0.066 0.934 31 H 0.066 0.934 32 H 0.113 0.887 33 H 0.118 0.882 34 H 0.273 0.727 35 H 0.128 0.872 36 H 0.108 0.892 37 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.151 0.889 -0.150 18.173 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.104 5.104 2 C -0.051 4.051 3 C -0.111 4.111 4 C -0.027 4.027 5 C -0.224 4.224 6 C 0.156 3.844 7 N -0.342 5.342 8 C 0.053 3.947 9 C -0.222 4.222 10 C -0.071 4.071 11 C -0.215 4.215 12 C 0.106 3.894 13 O -0.073 6.073 14 C -0.471 4.471 15 H 0.111 0.889 16 C -0.164 4.164 17 N -0.491 5.491 18 Si 0.767 3.233 19 H -0.194 1.194 20 H -0.202 1.202 21 H -0.194 1.194 22 C -0.257 4.257 23 C -0.067 4.067 24 C -0.224 4.224 25 C 0.032 3.968 26 Cl -0.029 7.029 27 H 0.157 0.843 28 H 0.155 0.845 29 H 0.245 0.755 30 H 0.084 0.916 31 H 0.084 0.916 32 H 0.131 0.869 33 H 0.137 0.863 34 H 0.083 0.917 35 H 0.146 0.854 36 H 0.126 0.874 37 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -19.381 1.099 0.155 19.413 hybrid contribution 1.097 -0.087 -0.920 1.434 sum -18.284 1.012 -0.764 18.328 Atomic orbital electron populations 1.81214 1.11955 1.07214 1.10026 1.25438 0.92397 0.93856 0.93384 1.15518 0.84537 0.94127 1.16869 1.20800 0.93361 0.95790 0.92761 1.20631 0.93743 0.97637 1.10339 1.17949 0.84546 0.92832 0.89100 1.45370 1.01743 1.13085 1.74031 1.20172 0.88598 0.85512 1.00468 1.19077 0.93477 1.14902 0.94699 1.20522 0.93229 0.96555 0.96823 1.20227 0.93970 1.10521 0.96826 1.19454 0.84904 0.91635 0.93382 1.83977 1.15139 1.75714 1.32460 1.21317 0.94290 1.47757 0.83727 0.88907 1.25333 0.95500 0.95923 0.99661 1.70018 1.09089 1.40678 1.29300 0.85755 0.78401 0.79198 0.79973 1.19378 1.20153 1.19378 1.21160 0.94797 1.10301 0.99468 1.20633 0.93688 0.96335 0.96088 1.20386 0.91413 0.98920 1.11695 1.20581 0.91860 0.86411 0.97909 1.98405 1.76613 1.34427 1.93447 0.84348 0.84485 0.75510 0.91617 0.91564 0.86936 0.86347 0.91717 0.85395 0.87375 0.83939 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -5.56 18.54 41.84 0.78 -4.78 16 2 C 0.26 2.89 14.38 -22.47 -0.32 2.56 16 3 C -0.10 -0.94 5.75 -106.74 -0.61 -1.55 16 4 C -0.01 -0.04 9.75 -39.21 -0.38 -0.42 16 5 C -0.20 -1.41 9.87 -39.44 -0.39 -1.80 16 6 C 0.27 2.21 6.65 -83.84 -0.56 1.65 16 7 N -0.72 -6.29 5.70 -59.81 -0.34 -6.63 16 8 C 0.17 1.72 5.02 -5.20 -0.03 1.70 16 9 C -0.22 -2.97 5.25 -104.57 -0.55 -3.51 16 10 C -0.05 -0.78 9.69 -39.61 -0.38 -1.16 16 11 C -0.20 -3.66 9.99 -39.39 -0.39 -4.05 16 12 C 0.16 3.53 6.65 -39.10 -0.26 3.27 16 13 O -0.17 -4.54 9.76 0.06 0.00 -4.54 16 14 C -0.40 -10.33 9.49 30.89 0.29 -10.04 16 15 H 0.09 2.22 5.20 -52.48 -0.27 1.95 16 16 C 0.04 1.07 5.49 -17.52 -0.10 0.98 16 17 N -0.86 -23.89 13.67 55.48 0.76 -23.13 16 18 Si 0.94 19.32 29.55 -169.99 -5.02 14.30 16 19 H -0.27 -5.34 7.11 56.52 0.40 -4.94 16 20 H -0.28 -5.57 7.11 56.52 0.40 -5.17 16 21 H -0.27 -5.33 7.11 56.52 0.40 -4.93 16 22 C -0.24 -4.57 9.17 -39.39 -0.36 -4.93 16 23 C -0.05 -0.74 9.69 -39.61 -0.38 -1.13 16 24 C -0.20 -1.71 9.06 -39.41 -0.36 -2.06 16 25 C 0.06 0.57 6.34 -39.10 -0.25 0.33 16 26 Cl -0.06 -0.56 28.02 -51.86 -1.45 -2.01 16 27 H 0.14 0.69 8.06 -52.49 -0.42 0.26 16 28 H 0.14 0.73 8.06 -52.49 -0.42 0.31 16 29 H 0.41 3.51 8.47 -40.82 -0.35 3.16 16 30 H 0.07 0.61 7.89 -51.93 -0.41 0.20 16 31 H 0.07 0.60 7.86 -51.93 -0.41 0.19 16 32 H 0.11 1.37 8.06 -52.48 -0.42 0.95 16 33 H 0.12 2.16 8.06 -52.49 -0.42 1.74 16 34 H 0.27 6.98 8.31 -40.82 -0.34 6.65 16 35 H 0.13 2.50 5.64 -52.49 -0.30 2.20 16 36 H 0.11 1.40 8.06 -52.49 -0.42 0.98 16 37 H 0.14 1.11 6.69 -52.48 -0.35 0.76 16 LS Contribution 349.15 15.07 5.26 5.26 Total: -1.00 -29.02 349.15 -8.39 -37.40 By element: Atomic # 1 Polarization: 7.64 SS G_CDS: -3.33 Total: 4.31 kcal Atomic # 6 Polarization: -15.15 SS G_CDS: -5.03 Total: -20.18 kcal Atomic # 7 Polarization: -35.73 SS G_CDS: 1.19 Total: -34.54 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: 0.00 Total: -4.54 kcal Atomic # 14 Polarization: 19.32 SS G_CDS: -5.02 Total: 14.30 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.45 Total: -2.01 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -29.02 -8.39 -37.40 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037253264.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.961 kcal (2) G-P(sol) polarization free energy of solvation -29.019 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.942 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.405 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.556 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds