Wall clock time and date at job start Tue Mar 31 2020 15:23:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.43196 * 179.97438 * 2 1 4 4 C 1.39742 * 120.20211 * 89.75808 * 3 2 1 5 5 C 1.37895 * 119.90789 * 179.97438 * 4 3 2 6 6 Cl 1.73597 * 119.83921 * 179.97438 * 5 4 3 7 7 C 1.38659 * 120.31724 * 359.97438 * 5 4 3 8 8 C 1.38027 * 120.40970 * 359.72190 * 7 5 4 9 9 C 1.38865 * 120.08318 * 0.55468 * 8 7 5 10 10 N 1.39091 * 120.15670 * 179.71687 * 9 8 7 11 11 C 1.46494 * 120.00009 * 359.73555 * 10 9 8 12 12 C 1.50701 * 109.47135 * 179.97438 * 11 10 9 13 13 C 1.38302 * 119.93101 * 89.99303 * 12 11 10 14 14 C 1.38105 * 120.06695 * 180.02562 * 13 12 11 15 15 C 1.38871 * 119.93200 * 359.97438 * 14 13 12 16 16 O 1.35753 * 120.07178 * 180.02562 * 15 14 13 17 17 C 1.34831 * 116.99766 * 354.46580 * 16 15 14 18 18 H 1.08005 * 119.99910 * 5.05947 * 17 16 15 19 19 C 1.38653 * 120.00325 * 185.05796 * 17 16 15 20 20 N 1.31555 * 119.99726 * 359.97438 * 19 17 16 21 21 Si 1.86799 * 120.00359 * 180.02562 * 19 17 16 22 22 H 1.48494 * 109.47164 * 89.99653 * 21 19 17 23 23 H 1.48499 * 109.47014 * 210.00195 * 21 19 17 24 24 H 1.48506 * 109.46904 * 329.99621 * 21 19 17 25 25 C 1.38880 * 119.86456 * 0.27348 * 15 14 13 26 26 C 1.38102 * 119.92774 * 359.49328 * 25 15 14 27 27 H 1.08000 * 120.04526 * 359.95157 * 4 3 2 28 28 H 1.08002 * 119.79658 * 180.02562 * 7 5 4 29 29 H 1.08001 * 119.95296 * 180.27858 * 8 7 5 30 30 H 0.97005 * 119.99606 * 179.72473 * 10 9 8 31 31 H 1.08992 * 109.47463 * 59.99244 * 11 10 9 32 32 H 1.09000 * 109.46792 * 299.99125 * 11 10 9 33 33 H 1.08001 * 119.96675 * 0.02562 * 13 12 11 34 34 H 1.07996 * 120.03107 * 179.97438 * 14 13 12 35 35 H 0.97003 * 120.00171 * 179.97438 * 20 19 17 36 36 H 1.08001 * 120.03810 * 179.72208 * 25 15 14 37 37 H 1.07994 * 119.96815 * 180.22560 * 26 25 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2709 -0.0041 -1.2077 5 6 4.6499 -0.0030 -1.2006 6 17 5.5214 -0.0096 -2.7020 7 6 5.3437 0.0035 -0.0001 8 6 4.6626 0.0146 1.2004 9 6 3.2740 0.0077 1.2129 10 7 2.5861 0.0129 2.4219 11 6 3.3266 0.0198 3.6859 12 6 2.3545 0.0251 4.8375 13 6 1.9100 -1.1710 5.3708 14 6 1.0188 -1.1694 6.4258 15 6 0.5694 0.0348 6.9514 16 8 -0.3063 0.0397 7.9888 17 6 -0.7890 -1.1543 8.3878 18 1 -0.4151 -2.0643 7.9421 19 6 -1.7655 -1.2141 9.3704 20 7 -2.2205 -0.1057 9.9137 21 14 -2.4338 -2.8683 9.9238 22 1 -1.6170 -3.3793 11.0537 23 1 -3.8434 -2.7106 10.3635 24 1 -2.3725 -3.8300 8.7938 25 6 1.0136 1.2342 6.4103 26 6 1.9085 1.2261 5.3586 27 1 2.7350 -0.0091 -2.1453 28 1 6.4237 0.0048 -0.0044 29 1 5.2104 0.0241 2.1311 30 1 1.6161 0.0122 2.4279 31 1 3.9528 0.9105 3.7353 32 1 3.9543 -0.8694 3.7440 33 1 2.2602 -2.1072 4.9618 34 1 0.6718 -2.1038 6.8415 35 1 -2.9039 -0.1474 10.6009 36 1 0.6624 2.1724 6.8140 37 1 2.2572 2.1584 4.9397 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000729182182.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:23:00 Heat of formation + Delta-G solvation = 44.161149 kcal Electronic energy + Delta-G solvation = -22908.192381 eV Core-core repulsion = 19255.890035 eV Total energy + Delta-G solvation = -3652.302346 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 328.072 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -40.18915 -39.21591 -37.34535 -36.86352 -36.35311 -35.25336 -32.49067 -31.77765 -30.88045 -30.35254 -28.51365 -25.93410 -24.94003 -24.25583 -22.16386 -22.03912 -20.71471 -19.30273 -18.15930 -17.58275 -17.11703 -16.58316 -15.63547 -15.19166 -14.89057 -14.63990 -14.55673 -14.51779 -14.03446 -13.80455 -13.67013 -13.39494 -13.33487 -13.16048 -13.12906 -12.87782 -12.49754 -12.32965 -11.86154 -11.84677 -11.63077 -11.41271 -11.16221 -10.98144 -10.89889 -10.78253 -10.53606 -10.14433 -9.49562 -9.40893 -8.97697 -8.38088 -7.73604 -7.43116 -6.58793 -4.17793 0.50823 1.02792 1.87702 1.95903 2.04487 2.55877 2.70593 3.03773 3.06019 3.11024 3.26782 3.57438 3.72233 3.85670 4.38450 4.41979 4.64994 4.86447 4.93738 4.95807 5.08955 5.11954 5.19497 5.41308 5.47949 5.54022 5.62003 5.66497 5.70867 5.88597 6.03522 6.18365 6.24128 6.49832 6.70471 6.85088 6.90067 7.04172 7.16103 7.27562 7.31769 7.40481 7.62401 7.85462 8.86232 9.53010 10.58402 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.025301 B = 0.002062 C = 0.002012 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1106.393331 B =13576.286696 C =13913.049618 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.417 5.417 2 C 0.254 3.746 3 C -0.110 4.110 4 C -0.009 4.009 5 C -0.107 4.107 6 Cl -0.075 7.075 7 C -0.028 4.028 8 C -0.190 4.190 9 C 0.277 3.723 10 N -0.720 5.720 11 C 0.177 3.823 12 C -0.223 4.223 13 C -0.048 4.048 14 C -0.238 4.238 15 C 0.162 3.838 16 O -0.171 6.171 17 C -0.394 4.394 18 H 0.094 0.906 19 C 0.041 3.959 20 N -0.857 5.857 21 Si 0.943 3.057 22 H -0.272 1.272 23 H -0.276 1.276 24 H -0.267 1.267 25 C -0.196 4.196 26 C -0.052 4.052 27 H 0.139 0.861 28 H 0.138 0.862 29 H 0.142 0.858 30 H 0.405 0.595 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.108 0.892 34 H 0.129 0.871 35 H 0.272 0.728 36 H 0.119 0.881 37 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.169 -0.421 -18.384 24.486 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.093 5.093 2 C -0.060 4.060 3 C -0.120 4.120 4 C -0.031 4.031 5 C -0.136 4.136 6 Cl -0.047 7.047 7 C -0.048 4.048 8 C -0.213 4.213 9 C 0.164 3.836 10 N -0.343 5.343 11 C 0.055 3.945 12 C -0.224 4.224 13 C -0.067 4.067 14 C -0.257 4.257 15 C 0.107 3.893 16 O -0.073 6.073 17 C -0.470 4.470 18 H 0.111 0.889 19 C -0.165 4.165 20 N -0.491 5.491 21 Si 0.767 3.233 22 H -0.197 1.197 23 H -0.201 1.201 24 H -0.191 1.191 25 C -0.215 4.215 26 C -0.071 4.071 27 H 0.157 0.843 28 H 0.156 0.844 29 H 0.160 0.840 30 H 0.241 0.759 31 H 0.087 0.913 32 H 0.086 0.914 33 H 0.126 0.874 34 H 0.146 0.854 35 H 0.082 0.918 36 H 0.137 0.863 37 H 0.131 0.869 Dipole moment (debyes) X Y Z Total from point charges 14.294 -0.168 -17.923 22.925 hybrid contribution -0.256 -0.872 0.195 0.929 sum 14.038 -1.040 -17.728 22.637 Atomic orbital electron populations 1.81324 1.11801 1.09997 1.06219 1.25426 0.92355 0.93624 0.94605 1.15264 0.84384 1.19605 0.92716 1.20718 0.92024 0.93540 0.96829 1.20285 0.91651 1.14297 0.87343 1.98360 1.76362 1.97499 1.32450 1.20986 1.00458 0.93394 0.89947 1.20579 0.91212 1.10666 0.98870 1.17899 0.91650 0.89089 0.85008 1.45458 1.09371 1.76735 1.02748 1.20194 0.92945 1.01348 0.80049 1.19087 1.07303 0.93794 1.02230 1.20634 0.95027 0.96390 0.94668 1.21161 1.04304 0.98524 1.01708 1.19448 0.89474 0.93319 0.87082 1.83978 1.50213 1.33271 1.39804 1.21369 1.21066 0.83026 1.21569 0.88866 1.25341 0.95715 0.99477 0.95933 1.70033 1.27146 1.27021 1.24879 0.85681 0.78465 0.79861 0.79281 1.19716 1.20109 1.19104 1.20225 1.04082 0.96408 1.00787 1.20520 0.95256 0.96498 0.94846 0.84346 0.84419 0.83990 0.75862 0.91316 0.91356 0.87363 0.85354 0.91779 0.86305 0.86927 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.42 -6.13 18.54 41.84 0.78 -5.36 16 2 C 0.25 3.09 14.09 -22.47 -0.32 2.77 16 3 C -0.11 -1.07 5.76 -106.62 -0.61 -1.68 16 4 C -0.01 -0.08 9.53 -39.15 -0.37 -0.45 16 5 C -0.11 -0.82 6.31 -39.55 -0.25 -1.07 16 6 Cl -0.08 -0.56 28.94 -51.86 -1.50 -2.06 16 7 C -0.03 -0.18 9.81 -39.50 -0.39 -0.57 16 8 C -0.19 -1.40 9.29 -39.43 -0.37 -1.77 16 9 C 0.28 2.59 6.66 -83.54 -0.56 2.03 16 10 N -0.72 -7.67 5.63 -59.59 -0.34 -8.01 16 11 C 0.18 1.85 5.03 -5.20 -0.03 1.82 16 12 C -0.22 -3.24 5.25 -104.57 -0.55 -3.79 16 13 C -0.05 -0.79 9.69 -39.61 -0.38 -1.18 16 14 C -0.24 -4.82 9.17 -39.40 -0.36 -5.18 16 15 C 0.16 3.71 6.65 -39.11 -0.26 3.45 16 16 O -0.17 -4.69 9.76 0.04 0.00 -4.69 16 17 C -0.39 -10.65 9.49 30.89 0.29 -10.36 16 18 H 0.09 2.32 5.20 -52.48 -0.27 2.04 16 19 C 0.04 1.09 5.49 -17.52 -0.10 0.99 16 20 N -0.86 -24.47 13.67 55.48 0.76 -23.71 16 21 Si 0.94 19.95 29.55 -169.99 -5.02 14.92 16 22 H -0.27 -5.58 7.11 56.52 0.40 -5.18 16 23 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 24 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 25 C -0.20 -3.86 9.99 -39.39 -0.39 -4.25 16 26 C -0.05 -0.83 9.69 -39.61 -0.38 -1.22 16 27 H 0.14 0.95 8.06 -52.49 -0.42 0.53 16 28 H 0.14 0.64 8.06 -52.49 -0.42 0.22 16 29 H 0.14 0.83 6.72 -52.49 -0.35 0.48 16 30 H 0.41 5.00 7.32 -40.82 -0.30 4.70 16 31 H 0.07 0.62 7.87 -51.93 -0.41 0.21 16 32 H 0.07 0.63 7.90 -51.93 -0.41 0.22 16 33 H 0.11 1.51 8.06 -52.49 -0.42 1.08 16 34 H 0.13 2.63 5.64 -52.49 -0.30 2.34 16 35 H 0.27 7.12 8.31 -40.82 -0.34 6.78 16 36 H 0.12 2.29 8.06 -52.49 -0.42 1.86 16 37 H 0.11 1.48 8.06 -52.49 -0.42 1.06 16 LS Contribution 348.56 15.07 5.25 5.25 Total: -1.00 -29.75 348.56 -8.38 -38.13 By element: Atomic # 1 Polarization: 9.26 SS G_CDS: -3.29 Total: 5.97 kcal Atomic # 6 Polarization: -15.43 SS G_CDS: -5.02 Total: -20.45 kcal Atomic # 7 Polarization: -38.27 SS G_CDS: 1.20 Total: -37.08 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: 0.00 Total: -4.69 kcal Atomic # 14 Polarization: 19.95 SS G_CDS: -5.02 Total: 14.92 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.50 Total: -2.06 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -29.75 -8.38 -38.13 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000729182182.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 82.296 kcal (2) G-P(sol) polarization free energy of solvation -29.749 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.134 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.161 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds