Wall clock time and date at job start Tue Mar 31 2020 14:47:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.53001 * 115.54717 * 2 1 4 4 O 1.45197 * 109.47158 * 325.58128 * 3 2 1 5 5 C 1.34756 * 116.99947 * 180.02562 * 4 3 2 6 6 O 1.21514 * 119.99952 * 359.97438 * 5 4 3 7 7 C 1.47395 * 120.00263 * 180.02562 * 5 4 3 8 8 C 1.39737 * 120.20257 * 359.97438 * 7 5 4 9 9 C 1.37804 * 119.91453 * 179.70312 * 8 7 5 10 10 C 1.38586 * 120.32973 * 0.28447 * 9 8 7 11 11 C 1.38023 * 120.41681 * 0.02562 * 10 9 8 12 12 C 1.38827 * 120.07847 * 359.97438 * 11 10 9 13 13 O 1.35502 * 120.16737 * 179.97438 * 12 11 10 14 14 C 1.34813 * 116.99882 * 354.40400 * 13 12 11 15 15 H 1.07998 * 119.99842 * 5.05969 * 14 13 12 16 16 C 1.38704 * 119.99776 * 185.06699 * 14 13 12 17 17 N 1.31512 * 120.00288 * 359.97438 * 16 14 13 18 18 Si 1.86804 * 119.99981 * 179.97438 * 16 14 13 19 19 H 1.48503 * 109.46841 * 59.99774 * 18 16 14 20 20 H 1.48491 * 109.47126 * 179.97438 * 18 16 14 21 21 H 1.48498 * 109.46980 * 300.00295 * 18 16 14 22 22 C 1.52998 * 117.49907 * 145.66764 * 2 1 3 23 23 C 1.52996 * 117.49778 * 214.32686 * 2 1 3 24 24 F 1.39906 * 117.49516 * 144.99701 * 23 2 1 25 25 Cl 1.80295 * 117.50184 * 359.97438 * 23 2 1 26 26 H 1.08996 * 109.47247 * 34.42101 * 1 2 3 27 27 H 1.09004 * 109.46986 * 154.41686 * 1 2 3 28 28 H 1.09004 * 109.46995 * 274.41463 * 1 2 3 29 29 H 1.08997 * 109.46703 * 205.58207 * 3 2 1 30 30 H 1.08998 * 109.46825 * 85.58030 * 3 2 1 31 31 H 1.08001 * 120.03767 * 359.97438 * 8 7 5 32 32 H 1.07996 * 119.83293 * 180.25577 * 9 8 7 33 33 H 1.08007 * 119.79109 * 180.02562 * 10 9 8 34 34 H 1.08001 * 119.95707 * 179.97438 * 11 10 9 35 35 H 0.96999 * 120.00316 * 180.02562 * 17 16 14 36 36 H 1.08996 * 117.49762 * 215.00336 * 22 2 1 37 37 H 1.08999 * 117.50010 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.1899 1.3804 0.0000 4 8 1.3798 2.3041 -0.7738 5 6 1.8248 3.5721 -0.8740 6 8 2.8612 3.8971 -0.3293 7 6 1.0538 4.5651 -1.6434 8 6 -0.1389 4.1962 -2.2711 9 6 -0.8582 5.1309 -2.9838 10 6 -0.4017 6.4354 -3.0867 11 6 0.7778 6.8131 -2.4776 12 6 1.5161 5.8854 -1.7553 13 8 2.6746 6.2541 -1.1570 14 6 3.1158 7.5053 -1.3963 15 1 2.5115 8.1899 -1.9730 16 6 4.3459 7.9133 -0.9021 17 7 5.0816 7.0797 -0.1996 18 14 4.9577 9.6468 -1.2343 19 1 3.9990 10.6276 -0.6649 20 1 6.2885 9.8317 -0.6021 21 1 5.0713 9.8592 -2.6996 22 6 2.2365 -1.1207 0.7654 23 6 2.2365 -1.1208 -0.7653 24 9 3.4364 -0.8049 -1.4116 25 17 1.2023 -2.3408 -1.5975 26 1 -0.3633 0.8477 -0.5809 27 1 -0.3633 -0.9269 -0.4438 28 1 -0.3633 0.0791 1.0247 29 1 3.1828 1.3084 -0.4437 30 1 2.2751 1.7423 1.0246 31 1 -0.4988 3.1808 -2.1940 32 1 -1.7819 4.8454 -3.4649 33 1 -0.9726 7.1610 -3.6472 34 1 1.1269 7.8316 -2.5630 35 1 5.9417 7.3651 0.1463 36 1 3.1713 -0.8746 1.2689 37 1 1.6113 -1.8582 1.2686 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000821865498.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:47:41 Heat of formation + Delta-G solvation = -106.111780 kcal Electronic energy + Delta-G solvation = -25253.055480 eV Core-core repulsion = 21131.174835 eV Total energy + Delta-G solvation = -4121.880645 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 328.071 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.13633 -39.95781 -38.90455 -37.96190 -36.45574 -36.18050 -35.27617 -32.44244 -30.79511 -29.04171 -28.88568 -27.26415 -25.48143 -23.40117 -22.73480 -21.64300 -20.31082 -19.70157 -18.10726 -17.64290 -17.35190 -16.56216 -16.50523 -15.75871 -15.49677 -15.17188 -14.69215 -14.45112 -14.16008 -13.81419 -13.79207 -13.54911 -13.45308 -13.18008 -12.70977 -12.67117 -12.49286 -12.35107 -11.83985 -11.78353 -11.57658 -11.39056 -11.17507 -11.10678 -10.94149 -10.83209 -10.62796 -10.52886 -10.33015 -9.82619 -9.79382 -9.30472 -8.95530 -8.36186 -7.41493 -6.53894 -4.13869 1.23306 1.56353 2.27756 2.75618 3.07111 3.08150 3.09516 3.11933 3.40824 3.51367 3.86614 4.08103 4.24943 4.51706 4.62194 4.98107 5.05928 5.10519 5.15527 5.30551 5.40905 5.45113 5.53982 5.59076 5.63260 5.73452 5.77161 6.02016 6.09274 6.14818 6.53186 6.60936 6.84599 6.93807 7.06049 7.19544 7.26370 7.62308 7.84300 8.65162 8.86057 9.54611 10.59661 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.016037 B = 0.003234 C = 0.002825 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1745.564739 B = 8657.034746 C = 9909.589263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.125 4.125 2 C -0.100 4.100 3 C 0.099 3.901 4 O -0.360 6.360 5 C 0.499 3.501 6 O -0.475 6.475 7 C -0.216 4.216 8 C -0.015 4.015 9 C -0.234 4.234 10 C -0.043 4.043 11 C -0.239 4.239 12 C 0.191 3.809 13 O -0.125 6.125 14 C -0.404 4.404 15 H 0.096 0.904 16 C 0.046 3.954 17 N -0.832 5.832 18 Si 0.943 3.057 19 H -0.268 1.268 20 H -0.276 1.276 21 H -0.268 1.268 22 C -0.148 4.148 23 C 0.102 3.898 24 F -0.143 7.143 25 Cl -0.107 7.107 26 H 0.086 0.914 27 H 0.071 0.929 28 H 0.072 0.928 29 H 0.079 0.921 30 H 0.085 0.915 31 H 0.124 0.876 32 H 0.112 0.888 33 H 0.113 0.887 34 H 0.134 0.866 35 H 0.274 0.726 36 H 0.124 0.876 37 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.143 -13.348 0.176 16.180 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.182 4.182 2 C -0.102 4.102 3 C 0.024 3.976 4 O -0.279 6.279 5 C 0.344 3.656 6 O -0.362 6.362 7 C -0.219 4.219 8 C -0.033 4.033 9 C -0.253 4.253 10 C -0.062 4.062 11 C -0.258 4.258 12 C 0.132 3.868 13 O -0.022 6.022 14 C -0.479 4.479 15 H 0.113 0.887 16 C -0.163 4.163 17 N -0.463 5.463 18 Si 0.767 3.233 19 H -0.193 1.193 20 H -0.201 1.201 21 H -0.192 1.192 22 C -0.186 4.186 23 C 0.058 3.942 24 F -0.123 7.123 25 Cl -0.081 7.081 26 H 0.104 0.896 27 H 0.090 0.910 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.103 0.897 31 H 0.142 0.858 32 H 0.130 0.870 33 H 0.131 0.869 34 H 0.152 0.848 35 H 0.084 0.916 36 H 0.142 0.858 37 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -8.390 -13.470 0.579 15.880 hybrid contribution 0.607 0.747 -0.360 1.027 sum -7.783 -12.723 0.219 14.917 Atomic orbital electron populations 1.21475 0.88970 1.04344 1.03396 1.22604 0.98194 0.90240 0.99117 1.22205 0.93595 0.84795 0.96956 1.86472 1.51982 1.21232 1.68175 1.21108 0.84444 0.80303 0.79701 1.91011 1.22743 1.78897 1.43505 1.17984 1.00593 0.90444 1.12892 1.20953 0.91510 0.98671 0.92197 1.20539 1.02532 0.94105 1.08160 1.20973 0.94290 0.95658 0.95234 1.21108 0.98002 1.00696 1.05964 1.19222 0.87329 0.90901 0.89397 1.84138 1.30149 1.31756 1.56204 1.21494 1.03433 0.86721 1.36286 0.88657 1.25416 0.94944 1.00161 0.95755 1.70100 1.11290 1.35065 1.29803 0.85760 0.78470 0.79983 0.79127 1.19264 1.20083 1.19247 1.24360 1.04294 0.99775 0.90158 1.23954 0.83362 0.97095 0.89794 1.92955 1.44342 1.92252 1.82794 1.98752 1.68506 1.58780 1.82018 0.89556 0.90984 0.90905 0.90327 0.89679 0.85793 0.86955 0.86939 0.84818 0.91636 0.85815 0.85279 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.23 9.64 37.16 0.36 -0.88 16 2 C -0.10 -1.14 2.59 -154.51 -0.40 -1.54 16 3 C 0.10 1.49 5.57 37.16 0.21 1.70 16 4 O -0.36 -6.42 8.04 -40.65 -0.33 -6.74 16 5 C 0.50 11.16 7.89 34.46 0.27 11.43 16 6 O -0.48 -12.67 14.96 -26.59 -0.40 -13.07 16 7 C -0.22 -4.76 5.89 -104.82 -0.62 -5.37 16 8 C -0.01 -0.27 9.61 -39.18 -0.38 -0.64 16 9 C -0.23 -3.84 10.02 -39.61 -0.40 -4.23 16 10 C -0.04 -0.74 10.03 -39.53 -0.40 -1.14 16 11 C -0.24 -5.00 9.16 -39.44 -0.36 -5.36 16 12 C 0.19 4.67 6.66 -38.58 -0.26 4.42 16 13 O -0.12 -3.60 7.84 -21.00 -0.16 -3.76 16 14 C -0.40 -11.17 9.49 30.90 0.29 -10.87 16 15 H 0.10 2.37 5.21 -52.49 -0.27 2.10 16 16 C 0.05 1.24 5.49 -17.52 -0.10 1.14 16 17 N -0.83 -24.51 13.67 55.48 0.76 -23.75 16 18 Si 0.94 20.03 29.55 -169.99 -5.02 15.01 16 19 H -0.27 -5.47 7.11 56.52 0.40 -5.06 16 20 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 21 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 22 C -0.15 -1.27 9.80 -26.70 -0.26 -1.53 16 23 C 0.10 1.17 4.33 -26.70 -0.12 1.06 16 24 F -0.14 -2.03 16.50 2.25 0.04 -1.99 16 25 Cl -0.11 -1.14 27.40 -51.86 -1.42 -2.56 16 26 H 0.09 0.97 6.87 -51.93 -0.36 0.61 16 27 H 0.07 0.64 6.12 -51.93 -0.32 0.32 16 28 H 0.07 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.08 1.29 7.10 -51.93 -0.37 0.92 16 30 H 0.09 1.24 8.14 -51.93 -0.42 0.82 16 31 H 0.12 1.87 7.61 -52.49 -0.40 1.47 16 32 H 0.11 1.48 8.06 -52.49 -0.42 1.06 16 33 H 0.11 1.56 8.06 -52.48 -0.42 1.13 16 34 H 0.13 2.73 5.64 -52.49 -0.30 2.43 16 35 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 36 H 0.12 0.95 8.14 -51.93 -0.42 0.53 16 37 H 0.13 0.80 8.14 -51.93 -0.42 0.37 16 LS Contribution 340.98 15.07 5.14 5.14 Total: -1.00 -32.84 340.98 -7.23 -40.07 By element: Atomic # 1 Polarization: 7.17 SS G_CDS: -3.68 Total: 3.48 kcal Atomic # 6 Polarization: -9.67 SS G_CDS: -2.15 Total: -11.81 kcal Atomic # 7 Polarization: -24.51 SS G_CDS: 0.76 Total: -23.75 kcal Atomic # 8 Polarization: -22.68 SS G_CDS: -0.89 Total: -23.57 kcal Atomic # 9 Polarization: -2.03 SS G_CDS: 0.04 Total: -1.99 kcal Atomic # 14 Polarization: 20.03 SS G_CDS: -5.02 Total: 15.01 kcal Atomic # 17 Polarization: -1.14 SS G_CDS: -1.42 Total: -2.56 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -32.84 -7.23 -40.07 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000821865498.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.045 kcal (2) G-P(sol) polarization free energy of solvation -32.837 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.882 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.067 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds