Wall clock time and date at job start Tue Mar 31 2020 14:47:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53004 * 115.54868 * 2 1 4 4 O 1.45200 * 109.47236 * 34.41631 * 3 2 1 5 5 C 1.34760 * 116.99887 * 179.97438 * 4 3 2 6 6 O 1.21506 * 120.00106 * 0.02562 * 5 4 3 7 7 C 1.47400 * 119.99765 * 180.02562 * 5 4 3 8 8 C 1.39732 * 120.20500 * 0.02562 * 7 5 4 9 9 C 1.37796 * 119.91349 * 180.02562 * 8 7 5 10 10 C 1.38586 * 120.33498 * 0.02562 * 9 8 7 11 11 C 1.38026 * 120.41462 * 0.02562 * 10 9 8 12 12 C 1.38837 * 120.07425 * 359.97438 * 11 10 9 13 13 O 1.35501 * 120.16286 * 179.97438 * 12 11 10 14 14 C 1.34810 * 117.00239 * 354.40382 * 13 12 11 15 15 H 1.07998 * 120.00110 * 5.05580 * 14 13 12 16 16 C 1.38706 * 119.99988 * 185.06739 * 14 13 12 17 17 N 1.31513 * 120.00130 * 359.97438 * 16 14 13 18 18 Si 1.86799 * 119.99868 * 179.97438 * 16 14 13 19 19 H 1.48498 * 109.47457 * 59.99776 * 18 16 14 20 20 H 1.48500 * 109.46998 * 179.97438 * 18 16 14 21 21 H 1.48495 * 109.46954 * 299.99521 * 18 16 14 22 22 C 1.52991 * 117.49727 * 145.66956 * 2 1 3 23 23 C 1.52997 * 117.49923 * 214.33241 * 2 1 3 24 24 F 1.39901 * 117.49997 * 359.97438 * 23 2 1 25 25 Cl 1.80300 * 117.50004 * 144.99807 * 23 2 1 26 26 H 1.08998 * 109.47191 * 85.57878 * 1 2 3 27 27 H 1.08991 * 109.47455 * 205.58348 * 1 2 3 28 28 H 1.08999 * 109.47389 * 325.58703 * 1 2 3 29 29 H 1.09005 * 109.47317 * 274.41463 * 3 2 1 30 30 H 1.09000 * 109.47190 * 154.41566 * 3 2 1 31 31 H 1.07997 * 120.03853 * 0.02562 * 8 7 5 32 32 H 1.08003 * 119.83389 * 179.71968 * 9 8 7 33 33 H 1.07998 * 119.79680 * 179.97438 * 10 9 8 34 34 H 1.07997 * 119.96416 * 179.97438 * 11 10 9 35 35 H 0.97005 * 120.00189 * 180.02562 * 17 16 14 36 36 H 1.09005 * 117.50074 * 215.00410 * 22 2 1 37 37 H 1.08996 * 117.50331 * 0.02562 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1899 1.3804 0.0000 4 8 1.3797 2.3042 0.7737 5 6 1.8248 3.5722 0.8739 6 8 2.8612 3.8971 0.3293 7 6 1.0543 4.5650 1.6443 8 6 -0.1378 4.1958 2.2728 9 6 -0.8536 5.1289 2.9910 10 6 -0.3976 6.4335 3.0933 11 6 0.7776 6.8134 2.4771 12 6 1.5124 5.8872 1.7492 13 8 2.6661 6.2582 1.1431 14 6 2.9872 7.5668 1.1869 15 1 2.3795 8.2531 1.7580 16 6 4.0978 8.0319 0.4983 17 7 4.8379 7.1962 -0.1969 18 14 4.5422 9.8452 0.5585 19 1 4.7987 10.2457 1.9652 20 1 5.7624 10.0830 -0.2537 21 1 3.4191 10.6485 0.0121 22 6 2.2364 -1.1207 0.7653 23 6 2.2364 -1.1207 -0.7654 24 9 1.4340 -2.0673 -1.4113 25 17 3.7829 -0.7136 -1.5983 26 1 -0.3633 0.0792 -1.0246 27 1 -0.3634 -0.9268 0.4437 28 1 -0.3634 0.8478 0.5808 29 1 2.2752 1.7424 -1.0247 30 1 3.1828 1.3085 0.4438 31 1 -0.4977 3.1805 2.1957 32 1 -1.7772 4.8432 3.4725 33 1 -0.9657 7.1579 3.6581 34 1 1.1260 7.8321 2.5613 35 1 5.6148 7.5213 -0.6782 36 1 3.1713 -0.8746 1.2689 37 1 1.6112 -1.8582 1.2685 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000821865500.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:47:47 Heat of formation + Delta-G solvation = -106.951000 kcal Electronic energy + Delta-G solvation = -25147.675624 eV Core-core repulsion = 21025.758587 eV Total energy + Delta-G solvation = -4121.917037 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 328.071 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -48.20552 -39.98486 -38.93448 -37.92025 -36.46578 -36.15631 -35.27918 -32.45110 -30.80370 -29.06505 -28.94314 -27.23961 -25.48994 -23.44222 -22.72115 -21.64945 -20.32865 -19.73115 -18.12028 -17.68240 -17.38675 -16.57961 -16.02783 -15.90048 -15.58158 -15.37982 -14.71355 -14.41613 -14.23515 -14.01190 -13.82782 -13.52328 -13.47429 -12.93574 -12.74302 -12.56890 -12.45446 -12.30431 -11.94218 -11.78940 -11.65709 -11.40098 -11.30216 -11.15652 -10.95174 -10.84911 -10.68217 -10.53559 -10.10483 -9.95112 -9.79782 -9.30845 -8.96339 -8.37736 -7.42830 -6.54623 -4.14684 1.24857 1.55009 2.26185 2.64494 3.06681 3.07068 3.08932 3.11552 3.39862 3.72333 3.85927 3.97337 4.18801 4.50363 4.59327 4.97022 5.02196 5.09192 5.21665 5.37980 5.41132 5.43716 5.52098 5.56297 5.63400 5.69536 5.76627 6.00381 6.07547 6.09971 6.51588 6.59469 6.83287 6.92592 7.04715 7.18242 7.25303 7.60839 7.83376 8.64349 8.85201 9.53537 10.58791 Molecular weight = 328.07amu Principal moments of inertia in cm(-1) A = 0.013943 B = 0.003407 C = 0.002787 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2007.735502 B = 8215.929319 C =10043.392579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.101 4.101 3 C 0.104 3.896 4 O -0.361 6.361 5 C 0.498 3.502 6 O -0.473 6.473 7 C -0.216 4.216 8 C -0.015 4.015 9 C -0.235 4.235 10 C -0.043 4.043 11 C -0.238 4.238 12 C 0.191 3.809 13 O -0.124 6.124 14 C -0.404 4.404 15 H 0.096 0.904 16 C 0.046 3.954 17 N -0.831 5.831 18 Si 0.943 3.057 19 H -0.268 1.268 20 H -0.276 1.276 21 H -0.268 1.268 22 C -0.150 4.150 23 C 0.102 3.898 24 F -0.145 7.145 25 Cl -0.102 7.102 26 H 0.069 0.931 27 H 0.064 0.936 28 H 0.091 0.909 29 H 0.082 0.918 30 H 0.079 0.921 31 H 0.124 0.876 32 H 0.112 0.888 33 H 0.112 0.888 34 H 0.134 0.866 35 H 0.274 0.726 36 H 0.126 0.874 37 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.918 -12.829 2.719 15.319 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.102 4.102 3 C 0.030 3.970 4 O -0.280 6.280 5 C 0.344 3.656 6 O -0.359 6.359 7 C -0.219 4.219 8 C -0.034 4.034 9 C -0.254 4.254 10 C -0.062 4.062 11 C -0.257 4.257 12 C 0.131 3.869 13 O -0.022 6.022 14 C -0.479 4.479 15 H 0.113 0.887 16 C -0.163 4.163 17 N -0.462 5.462 18 Si 0.766 3.234 19 H -0.193 1.193 20 H -0.201 1.201 21 H -0.192 1.192 22 C -0.188 4.188 23 C 0.058 3.942 24 F -0.126 7.126 25 Cl -0.076 7.076 26 H 0.087 0.913 27 H 0.083 0.917 28 H 0.109 0.891 29 H 0.100 0.900 30 H 0.097 0.903 31 H 0.142 0.858 32 H 0.130 0.870 33 H 0.130 0.870 34 H 0.152 0.848 35 H 0.084 0.916 36 H 0.144 0.856 37 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -7.023 -12.866 2.123 14.811 hybrid contribution 0.388 0.702 -0.251 0.840 sum -6.635 -12.164 1.872 13.982 Atomic orbital electron populations 1.21352 0.89097 1.03693 1.03429 1.22550 0.97772 0.90756 0.99157 1.22212 0.93041 0.84707 0.97074 1.86451 1.52168 1.21244 1.68114 1.21107 0.84532 0.80283 0.79719 1.91019 1.22810 1.78750 1.43346 1.17980 1.00307 0.90908 1.12719 1.20938 0.91498 0.98675 0.92251 1.20534 1.02559 0.94117 1.08173 1.20971 0.94363 0.95608 0.95237 1.21114 0.98365 1.00822 1.05440 1.19224 0.86028 0.91269 0.90392 1.84136 1.29601 1.27329 1.61104 1.21493 1.12529 0.81316 1.32609 0.88654 1.25417 0.95237 1.00486 0.95129 1.70102 1.14675 1.35048 1.26334 0.85762 0.78574 0.80078 0.78941 1.19260 1.20078 1.19246 1.24498 1.04232 1.00408 0.89657 1.23846 0.85407 0.94532 0.90380 1.92928 1.71994 1.64726 1.82905 1.98800 1.33423 1.93443 1.81906 0.91253 0.91712 0.89067 0.90023 0.90280 0.85810 0.86981 0.86956 0.84826 0.91610 0.85579 0.85801 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -1.20 9.39 37.16 0.35 -0.85 16 2 C -0.10 -1.15 2.59 -154.51 -0.40 -1.55 16 3 C 0.10 1.56 4.65 37.16 0.17 1.73 16 4 O -0.36 -6.20 8.04 -40.65 -0.33 -6.53 16 5 C 0.50 10.90 7.89 34.46 0.27 11.17 16 6 O -0.47 -12.46 14.96 -26.59 -0.40 -12.86 16 7 C -0.22 -4.65 5.89 -104.82 -0.62 -5.27 16 8 C -0.02 -0.26 9.61 -39.19 -0.38 -0.64 16 9 C -0.23 -3.74 10.02 -39.61 -0.40 -4.14 16 10 C -0.04 -0.73 10.03 -39.53 -0.40 -1.13 16 11 C -0.24 -4.92 9.16 -39.44 -0.36 -5.28 16 12 C 0.19 4.59 6.66 -38.57 -0.26 4.33 16 13 O -0.12 -3.54 7.84 -20.99 -0.16 -3.71 16 14 C -0.40 -11.08 9.49 30.91 0.29 -10.79 16 15 H 0.10 2.35 5.21 -52.49 -0.27 2.08 16 16 C 0.05 1.24 5.49 -17.51 -0.10 1.14 16 17 N -0.83 -24.39 13.67 55.48 0.76 -23.63 16 18 Si 0.94 19.92 29.55 -169.99 -5.02 14.90 16 19 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 20 H -0.28 -5.72 7.11 56.52 0.40 -5.32 16 21 H -0.27 -5.45 7.11 56.52 0.40 -5.05 16 22 C -0.15 -1.37 9.65 -26.70 -0.26 -1.63 16 23 C 0.10 1.14 4.33 -26.69 -0.12 1.03 16 24 F -0.15 -1.70 17.14 2.25 0.04 -1.66 16 25 Cl -0.10 -1.28 28.43 -51.86 -1.47 -2.75 16 26 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 27 H 0.06 0.53 7.90 -51.93 -0.41 0.12 16 28 H 0.09 0.97 6.87 -51.93 -0.36 0.62 16 29 H 0.08 1.31 8.14 -51.93 -0.42 0.89 16 30 H 0.08 1.20 7.89 -51.93 -0.41 0.79 16 31 H 0.12 1.77 7.61 -52.49 -0.40 1.37 16 32 H 0.11 1.43 8.06 -52.48 -0.42 1.01 16 33 H 0.11 1.52 8.06 -52.49 -0.42 1.10 16 34 H 0.13 2.70 5.64 -52.49 -0.30 2.40 16 35 H 0.27 7.35 8.31 -40.82 -0.34 7.01 16 36 H 0.13 1.07 8.05 -51.93 -0.42 0.65 16 37 H 0.12 0.87 8.05 -51.93 -0.42 0.45 16 LS Contribution 343.72 15.07 5.18 5.18 Total: -1.00 -32.17 343.72 -7.40 -39.58 By element: Atomic # 1 Polarization: 7.16 SS G_CDS: -3.81 Total: 3.35 kcal Atomic # 6 Polarization: -9.67 SS G_CDS: -2.19 Total: -11.86 kcal Atomic # 7 Polarization: -24.39 SS G_CDS: 0.76 Total: -23.63 kcal Atomic # 8 Polarization: -22.21 SS G_CDS: -0.89 Total: -23.09 kcal Atomic # 9 Polarization: -1.70 SS G_CDS: 0.04 Total: -1.66 kcal Atomic # 14 Polarization: 19.92 SS G_CDS: -5.02 Total: 14.90 kcal Atomic # 17 Polarization: -1.28 SS G_CDS: -1.47 Total: -2.75 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -32.17 -7.40 -39.58 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000821865500.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.376 kcal (2) G-P(sol) polarization free energy of solvation -32.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.405 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.575 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.951 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds