Wall clock time and date at job start Tue Mar 31 2020 16:13:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36001 * 117.00304 * 2 1 4 4 C 1.38131 * 119.98828 * 359.97438 * 3 2 1 5 5 C 1.39813 * 119.86542 * 179.97438 * 4 3 2 6 6 C 1.47416 * 120.07899 * 179.97438 * 5 4 3 7 7 O 1.21545 * 119.99730 * 0.02562 * 6 5 4 8 8 O 1.34767 * 119.99951 * 180.02562 * 6 5 4 9 9 C 1.34864 * 117.00009 * 180.02562 * 8 6 5 10 10 H 1.08007 * 119.99903 * 359.97438 * 9 8 6 11 11 C 1.38789 * 120.00130 * 180.02562 * 9 8 6 12 12 N 1.31426 * 120.00309 * 359.97438 * 11 9 8 13 13 Si 1.86808 * 120.00101 * 180.02562 * 11 9 8 14 14 H 1.48497 * 109.47279 * 59.99700 * 13 11 9 15 15 H 1.48499 * 109.47180 * 180.02562 * 13 11 9 16 16 H 1.48500 * 109.46629 * 299.99727 * 13 11 9 17 17 C 1.39811 * 119.84499 * 0.02562 * 5 4 3 18 18 C 1.37851 * 119.98068 * 359.97438 * 17 5 4 19 19 Cl 1.73599 * 119.93199 * 179.97438 * 18 17 5 20 20 C 1.38963 * 120.13706 * 359.72986 * 18 17 5 21 21 O 1.35814 * 119.92413 * 180.29560 * 20 18 17 22 22 C 1.42904 * 116.99616 * 270.25243 * 21 20 18 23 23 C 1.53001 * 109.46579 * 180.02562 * 22 21 20 24 24 C 1.53005 * 109.47011 * 174.99688 * 23 22 21 25 25 C 1.52994 * 109.47284 * 294.99651 * 23 22 21 26 26 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46938 * 59.99841 * 1 2 3 28 28 H 1.09004 * 109.46926 * 299.99962 * 1 2 3 29 29 H 1.08007 * 120.07016 * 359.97438 * 4 3 2 30 30 H 0.96993 * 120.00339 * 179.97438 * 12 11 9 31 31 H 1.08002 * 120.00577 * 179.97438 * 17 5 4 32 32 H 1.08998 * 109.46966 * 299.99700 * 22 21 20 33 33 H 1.08996 * 109.47731 * 60.00209 * 22 21 20 34 34 H 1.09001 * 109.47610 * 55.00375 * 23 22 21 35 35 H 1.09010 * 109.46948 * 59.99859 * 24 23 22 36 36 H 1.08997 * 109.47319 * 179.97438 * 24 23 22 37 37 H 1.08999 * 109.47440 * 300.00583 * 24 23 22 38 38 H 1.08999 * 109.47398 * 300.00083 * 25 23 22 39 39 H 1.09002 * 109.47112 * 60.00359 * 25 23 22 40 40 H 1.09003 * 109.46981 * 180.02562 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 1.2940 2.3701 -0.0005 5 6 1.9315 3.6144 0.0000 6 6 1.1331 4.8536 -0.0011 7 8 -0.0809 4.7943 -0.0021 8 8 1.7492 6.0522 -0.0011 9 6 0.9604 7.1461 -0.0017 10 1 -0.1142 7.0371 -0.0025 11 6 1.5294 8.4120 -0.0022 12 7 2.8370 8.5448 -0.0017 13 14 0.4368 9.9272 -0.0022 14 1 -0.4201 9.9196 1.2105 15 1 1.2829 11.1476 -0.0035 16 1 -0.4209 9.9189 -1.2145 17 6 3.3281 3.6808 0.0005 18 6 4.0728 2.5207 0.0011 19 17 5.8067 2.6046 0.0011 20 6 3.4384 1.2844 0.0067 21 8 4.1763 0.1442 0.0133 22 6 4.5348 -0.4038 -1.2569 23 6 5.3575 -1.6769 -1.0490 24 6 5.6354 -2.3315 -2.4038 25 6 6.6832 -1.3227 -0.3723 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 0.2154 2.3147 -0.0014 30 1 3.2346 9.4295 -0.0025 31 1 3.8232 4.6406 0.0006 32 1 3.6312 -0.6430 -1.8174 33 1 5.1254 0.3241 -1.8131 34 1 4.8013 -2.3701 -0.4180 35 1 6.1917 -1.6383 -3.0349 36 1 6.2218 -3.2382 -2.2558 37 1 4.6909 -2.5837 -2.8860 38 1 7.2395 -0.6297 -1.0034 39 1 6.4853 -0.8565 0.5928 40 1 7.2695 -2.2297 -0.2247 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000057651752.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:13:19 Heat of formation + Delta-G solvation = -144.771756 kcal Electronic energy + Delta-G solvation = -25576.574050 eV Core-core repulsion = 21576.477287 eV Total energy + Delta-G solvation = -4000.096763 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 328.096 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -40.56863 -39.06320 -38.44016 -37.17581 -36.13112 -35.39103 -34.99504 -32.32723 -30.24255 -30.04890 -27.46916 -27.30098 -26.58045 -25.45607 -23.28340 -22.26428 -20.56552 -20.42503 -18.46642 -17.95896 -17.51876 -16.81608 -16.09532 -16.04097 -15.54234 -15.10500 -15.02034 -14.68353 -14.62266 -14.47169 -14.21700 -13.63009 -13.45772 -13.23692 -12.73006 -12.57623 -12.42127 -12.31800 -11.85687 -11.80553 -11.76458 -11.47418 -11.36944 -11.24258 -11.13542 -10.95028 -10.80047 -10.69465 -10.54689 -10.41420 -9.99145 -9.86253 -9.24985 -8.72453 -8.59042 -8.16249 -6.58126 -4.19648 0.74481 1.30815 2.09838 2.92325 3.11158 3.15388 3.15919 3.25925 3.61085 3.79056 4.09250 4.33505 4.67879 4.73406 4.90225 5.00800 5.03081 5.06830 5.14849 5.21201 5.31716 5.34615 5.38453 5.43620 5.46365 5.51885 5.56645 5.67252 5.70704 5.78764 5.89104 6.13273 6.17356 6.22882 6.31259 6.54937 6.77657 7.05780 7.24159 7.56379 7.78371 8.54982 8.89427 9.66909 10.58535 Molecular weight = 328.10amu Principal moments of inertia in cm(-1) A = 0.017506 B = 0.003245 C = 0.002818 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1599.027502 B = 8625.698083 C = 9932.379809 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.304 6.304 3 C 0.111 3.889 4 C -0.147 4.147 5 C -0.037 4.037 6 C 0.426 3.574 7 O -0.551 6.551 8 O -0.197 6.197 9 C -0.373 4.373 10 H 0.100 0.900 11 C 0.043 3.957 12 N -0.851 5.851 13 Si 0.948 3.052 14 H -0.268 1.268 15 H -0.277 1.277 16 H -0.268 1.268 17 C -0.089 4.089 18 C -0.027 4.027 19 Cl -0.049 7.049 20 C 0.081 3.919 21 O -0.311 6.311 22 C 0.069 3.931 23 C -0.092 4.092 24 C -0.145 4.145 25 C -0.145 4.145 26 H 0.101 0.899 27 H 0.058 0.942 28 H 0.060 0.940 29 H 0.150 0.850 30 H 0.274 0.726 31 H 0.159 0.841 32 H 0.053 0.947 33 H 0.054 0.946 34 H 0.079 0.921 35 H 0.057 0.943 36 H 0.061 0.939 37 H 0.056 0.944 38 H 0.053 0.947 39 H 0.065 0.935 40 H 0.052 0.948 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.397 -18.161 -2.586 18.864 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.217 6.217 3 C 0.065 3.935 4 C -0.167 4.167 5 C -0.039 4.039 6 C 0.275 3.725 7 O -0.451 6.451 8 O -0.103 6.103 9 C -0.448 4.448 10 H 0.117 0.883 11 C -0.163 4.163 12 N -0.486 5.486 13 Si 0.772 3.228 14 H -0.193 1.193 15 H -0.202 1.202 16 H -0.193 1.193 17 C -0.108 4.108 18 C -0.055 4.055 19 Cl -0.020 7.020 20 C 0.035 3.965 21 O -0.228 6.228 22 C -0.005 4.005 23 C -0.110 4.110 24 C -0.203 4.203 25 C -0.202 4.202 26 H 0.119 0.881 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.168 0.832 30 H 0.084 0.916 31 H 0.177 0.823 32 H 0.071 0.929 33 H 0.072 0.928 34 H 0.098 0.902 35 H 0.076 0.924 36 H 0.080 0.920 37 H 0.075 0.925 38 H 0.072 0.928 39 H 0.084 0.916 40 H 0.071 0.929 Dipole moment (debyes) X Y Z Total from point charges 4.589 -18.258 -2.439 18.983 hybrid contribution -0.671 1.036 -0.174 1.247 sum 3.918 -17.222 -2.613 17.854 Atomic orbital electron populations 1.23147 0.78139 1.03911 1.02065 1.86128 1.21396 1.25408 1.88778 1.18865 0.90653 0.84958 0.99050 1.21290 1.01307 0.90009 1.04066 1.19113 0.92261 0.91910 1.00609 1.20390 0.86307 0.84645 0.81167 1.90640 1.14798 1.87672 1.51980 1.83892 1.39789 1.12692 1.73947 1.21327 0.91223 0.81016 1.51271 0.88265 1.25433 0.96573 0.98413 0.95914 1.69965 1.09604 1.24900 1.44155 0.85674 0.78916 0.78705 0.79547 1.19254 1.20176 1.19278 1.21387 0.92676 0.98271 0.98492 1.20854 0.85671 0.93171 1.05785 1.98360 1.08294 1.98556 1.96790 1.17593 0.86420 0.85521 1.06937 1.86041 1.70082 1.37484 1.29163 1.22868 0.98156 0.94990 0.84535 1.21071 0.96693 0.95571 0.97671 1.21781 1.01774 1.00600 0.96107 1.21794 0.95900 1.01064 1.01437 0.88109 0.92306 0.92177 0.83216 0.91574 0.82341 0.92858 0.92762 0.90217 0.92431 0.91977 0.92491 0.92817 0.91639 0.92935 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.23 9.81 101.05 0.99 1.22 16 2 O -0.30 -4.24 10.27 -34.43 -0.35 -4.60 16 3 C 0.11 1.76 6.69 -39.20 -0.26 1.50 16 4 C -0.15 -2.56 8.58 -39.03 -0.33 -2.89 16 5 C -0.04 -0.75 5.87 -104.98 -0.62 -1.37 16 6 C 0.43 10.63 7.83 34.47 0.27 10.90 16 7 O -0.55 -14.63 15.59 -19.30 -0.30 -14.93 16 8 O -0.20 -5.50 8.98 -21.76 -0.20 -5.70 16 9 C -0.37 -10.67 9.65 30.94 0.30 -10.37 16 10 H 0.10 2.84 6.86 -52.48 -0.36 2.48 16 11 C 0.04 1.16 5.50 -17.52 -0.10 1.06 16 12 N -0.85 -23.91 13.67 55.49 0.76 -23.15 16 13 Si 0.95 20.49 29.55 -169.99 -5.02 15.46 16 14 H -0.27 -5.67 7.11 56.52 0.40 -5.26 16 15 H -0.28 -5.74 7.11 56.52 0.40 -5.33 16 16 H -0.27 -5.66 7.11 56.52 0.40 -5.26 16 17 C -0.09 -1.67 9.38 -39.13 -0.37 -2.04 16 18 C -0.03 -0.46 6.32 -39.45 -0.25 -0.71 16 19 Cl -0.05 -0.73 28.48 -51.86 -1.48 -2.21 16 20 C 0.08 1.30 5.74 -38.89 -0.22 1.08 16 21 O -0.31 -4.55 8.81 -33.84 -0.30 -4.85 16 22 C 0.07 0.82 5.44 37.16 0.20 1.02 16 23 C -0.09 -0.88 3.16 -90.62 -0.29 -1.17 16 24 C -0.15 -1.11 9.19 37.16 0.34 -0.77 16 25 C -0.14 -1.38 9.09 37.15 0.34 -1.04 16 26 H 0.10 0.75 8.14 -51.93 -0.42 0.33 16 27 H 0.06 0.58 7.66 -51.93 -0.40 0.18 16 28 H 0.06 0.61 7.66 -51.93 -0.40 0.21 16 29 H 0.15 2.46 5.87 -52.48 -0.31 2.15 16 30 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 31 H 0.16 3.14 7.60 -52.49 -0.40 2.74 16 32 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 33 H 0.05 0.65 8.14 -51.93 -0.42 0.22 16 34 H 0.08 0.79 8.14 -51.93 -0.42 0.36 16 35 H 0.06 0.43 8.14 -51.92 -0.42 0.01 16 36 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 37 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 38 H 0.05 0.51 8.14 -51.93 -0.42 0.08 16 39 H 0.06 0.72 7.82 -51.93 -0.41 0.31 16 40 H 0.05 0.42 8.14 -51.93 -0.42 0.00 16 LS Contribution 363.97 15.07 5.48 5.48 Total: -1.00 -31.33 363.97 -6.61 -37.94 By element: Atomic # 1 Polarization: 5.33 SS G_CDS: -5.21 Total: 0.12 kcal Atomic # 6 Polarization: -3.58 SS G_CDS: 0.01 Total: -3.58 kcal Atomic # 7 Polarization: -23.91 SS G_CDS: 0.76 Total: -23.15 kcal Atomic # 8 Polarization: -28.93 SS G_CDS: -1.15 Total: -30.08 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.02 Total: 15.46 kcal Atomic # 17 Polarization: -0.73 SS G_CDS: -1.48 Total: -2.21 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -31.33 -6.61 -37.94 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000057651752.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -106.833 kcal (2) G-P(sol) polarization free energy of solvation -31.332 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.164 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds