Wall clock time and date at job start Tue Mar 31 2020 16:40:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53010 * 1 3 3 C 1.52996 * 109.47318 * 2 1 4 4 O 1.42895 * 109.47382 * 179.97438 * 3 2 1 5 5 C 1.35814 * 117.00305 * 179.97438 * 4 3 2 6 6 C 1.38954 * 119.92728 * 270.02198 * 5 4 3 7 7 Cl 1.73596 * 119.93363 * 359.97438 * 6 5 4 8 8 C 1.37853 * 120.13534 * 179.71781 * 6 5 4 9 9 C 1.39811 * 119.97736 * 0.49660 * 8 6 5 10 10 C 1.47423 * 120.07225 * 179.78920 * 9 8 6 11 11 O 1.21535 * 120.00031 * 179.72053 * 10 9 8 12 12 O 1.34774 * 119.99887 * 359.71683 * 10 9 8 13 13 C 1.34864 * 116.99760 * 180.02562 * 12 10 9 14 14 H 1.07995 * 119.99976 * 359.72995 * 13 12 10 15 15 C 1.38795 * 120.00137 * 179.97438 * 13 12 10 16 16 N 1.31424 * 119.99607 * 0.02562 * 15 13 12 17 17 Si 1.86800 * 120.00283 * 179.97438 * 15 13 12 18 18 H 1.48503 * 109.46819 * 60.00429 * 17 15 13 19 19 H 1.48494 * 109.47291 * 180.02562 * 17 15 13 20 20 H 1.48492 * 109.47256 * 300.00583 * 17 15 13 21 21 C 1.39801 * 119.85092 * 359.50757 * 9 8 6 22 22 C 1.38137 * 119.86441 * 0.25246 * 21 9 8 23 23 O 1.36001 * 119.99092 * 179.97438 * 22 21 9 24 24 C 1.42900 * 116.99964 * 0.02562 * 23 22 21 25 25 C 1.52999 * 109.47024 * 179.97438 * 24 23 22 26 26 H 1.08993 * 109.47221 * 180.02562 * 1 2 3 27 27 H 1.08999 * 109.46828 * 300.00383 * 1 2 3 28 28 H 1.08999 * 109.46660 * 60.00418 * 1 2 3 29 29 H 1.08991 * 109.46965 * 239.99325 * 2 1 3 30 30 H 1.08999 * 109.46660 * 119.99581 * 2 1 3 31 31 H 1.08996 * 109.47630 * 59.99265 * 3 2 1 32 32 H 1.09004 * 109.46887 * 299.99903 * 3 2 1 33 33 H 1.08002 * 120.01216 * 180.25818 * 8 6 5 34 34 H 0.97005 * 119.99852 * 179.97438 * 16 15 13 35 35 H 1.08003 * 120.07055 * 180.23719 * 21 9 8 36 36 H 1.08996 * 109.47230 * 299.99902 * 24 23 22 37 37 H 1.09001 * 109.47406 * 59.99917 * 24 23 22 38 38 H 1.09004 * 109.47229 * 299.99959 * 25 24 23 39 39 H 1.09001 * 109.47206 * 60.00218 * 25 24 23 40 40 H 1.09010 * 109.47223 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 8 3.4691 1.4425 0.0006 5 6 4.0857 2.6525 0.0001 6 6 4.4006 3.2697 -1.2044 7 17 4.0055 2.4922 -2.7053 8 6 5.0212 4.5006 -1.2098 9 6 5.3443 5.1254 -0.0016 10 6 6.0123 6.4397 -0.0050 11 8 6.2880 6.9839 1.0461 12 8 6.3172 7.0375 -1.1738 13 6 6.9279 8.2380 -1.1063 14 1 7.1468 8.6793 -0.1452 15 6 7.2706 8.9088 -2.2721 16 7 6.9995 8.3743 -3.4417 17 14 8.1158 10.5721 -2.1787 18 1 9.4041 10.4325 -1.4532 19 1 8.3726 11.0747 -3.5522 20 1 7.2424 11.5313 -1.4563 21 6 5.0273 4.5038 1.2099 22 6 4.4009 3.2726 1.2080 23 8 4.0917 2.6654 2.3850 24 6 4.4434 3.3581 3.5843 25 6 4.0194 2.5264 4.7966 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3632 0.5138 -0.8900 29 1 1.8934 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 1.6768 1.9564 0.8899 32 1 1.6768 1.9563 -0.8900 33 1 5.2613 4.9804 -2.1472 34 1 7.2386 8.8432 -4.2564 35 1 5.2718 4.9851 2.1453 36 1 5.5216 3.5153 3.6103 37 1 3.9349 4.3219 3.6097 38 1 2.9411 2.3696 4.7704 39 1 4.5276 1.5624 4.7715 40 1 4.2881 3.0546 5.7115 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000058028402.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:40:08 Heat of formation + Delta-G solvation = -146.553567 kcal Electronic energy + Delta-G solvation = -25471.966167 eV Core-core repulsion = 21471.792139 eV Total energy + Delta-G solvation = -4000.174028 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 328.096 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.57628 -39.05421 -38.42945 -37.08236 -36.15574 -35.18364 -33.94997 -32.33576 -31.93988 -30.15732 -29.44786 -26.61526 -25.58247 -24.21541 -23.14530 -21.74837 -21.67069 -20.52095 -18.52952 -17.93285 -17.49139 -16.84293 -16.27097 -16.09018 -15.46828 -15.38415 -15.05943 -14.65938 -14.60166 -14.44634 -13.96818 -13.49147 -13.40695 -13.02374 -12.81131 -12.71668 -12.55353 -12.37492 -12.17122 -11.82444 -11.75179 -11.46638 -11.40952 -11.24751 -11.17340 -11.03815 -10.83740 -10.71589 -10.54485 -10.38982 -9.98855 -9.85945 -9.24670 -8.72168 -8.58884 -8.14861 -6.57858 -4.19320 0.74763 1.31421 2.09244 2.92474 3.11269 3.15227 3.15677 3.17238 3.61221 3.79250 4.09705 4.33673 4.78990 4.81715 4.81950 4.86575 4.98035 5.03403 5.08675 5.16287 5.19387 5.31923 5.36047 5.39538 5.47037 5.53326 5.58187 5.64645 5.65700 5.77797 5.88149 5.95368 6.04380 6.18855 6.32322 6.56086 6.78036 7.08909 7.24505 7.57069 7.78683 8.55321 8.89705 9.67256 10.58805 Molecular weight = 328.10amu Principal moments of inertia in cm(-1) A = 0.014033 B = 0.003442 C = 0.002845 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1994.801098 B = 8133.620171 C = 9839.711284 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.120 4.120 3 C 0.065 3.935 4 O -0.314 6.314 5 C 0.080 3.920 6 C -0.027 4.027 7 Cl -0.050 7.050 8 C -0.089 4.089 9 C -0.037 4.037 10 C 0.426 3.574 11 O -0.551 6.551 12 O -0.197 6.197 13 C -0.373 4.373 14 H 0.100 0.900 15 C 0.043 3.957 16 N -0.851 5.851 17 Si 0.948 3.052 18 H -0.268 1.268 19 H -0.277 1.277 20 H -0.268 1.268 21 C -0.148 4.148 22 C 0.114 3.886 23 O -0.302 6.302 24 C 0.048 3.952 25 C -0.148 4.148 26 H 0.061 0.939 27 H 0.056 0.944 28 H 0.057 0.943 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.053 0.947 32 H 0.053 0.947 33 H 0.159 0.841 34 H 0.274 0.726 35 H 0.150 0.850 36 H 0.066 0.934 37 H 0.065 0.935 38 H 0.064 0.936 39 H 0.066 0.934 40 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.040 -13.912 7.740 18.822 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.158 4.158 3 C -0.010 4.010 4 O -0.231 6.231 5 C 0.034 3.966 6 C -0.054 4.054 7 Cl -0.021 7.021 8 C -0.109 4.109 9 C -0.038 4.038 10 C 0.275 3.725 11 O -0.451 6.451 12 O -0.103 6.103 13 C -0.448 4.448 14 H 0.117 0.883 15 C -0.163 4.163 16 N -0.486 5.486 17 Si 0.772 3.228 18 H -0.193 1.193 19 H -0.202 1.202 20 H -0.193 1.193 21 C -0.167 4.167 22 C 0.068 3.932 23 O -0.216 6.216 24 C -0.028 4.028 25 C -0.205 4.205 26 H 0.080 0.920 27 H 0.075 0.925 28 H 0.076 0.924 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.071 0.929 32 H 0.072 0.928 33 H 0.177 0.823 34 H 0.084 0.916 35 H 0.167 0.833 36 H 0.085 0.915 37 H 0.083 0.917 38 H 0.083 0.917 39 H 0.085 0.915 40 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -9.997 -14.146 7.641 18.932 hybrid contribution 0.412 1.161 -0.092 1.236 sum -9.585 -12.985 7.548 17.817 Atomic orbital electron populations 1.21687 0.94659 1.02141 1.02137 1.21430 0.95595 0.95273 1.03453 1.22823 0.79219 0.98168 1.00775 1.86038 1.19628 1.23399 1.93986 1.17582 1.02302 0.88297 0.88383 1.20845 1.03633 0.94428 0.86538 1.98360 1.92589 1.80639 1.30464 1.21383 0.97082 0.92434 0.99965 1.19114 0.98730 0.93615 0.92390 1.20389 0.82429 0.85974 0.83705 1.90637 1.55593 1.65832 1.33002 1.83894 1.63280 1.32758 1.30394 1.21326 1.36072 0.92255 0.95188 0.88266 1.25434 0.96969 0.99983 0.93957 1.69970 1.42654 1.38412 0.97585 0.85671 0.79607 0.79727 0.77825 1.19254 1.20179 1.19283 1.21285 1.01536 0.94340 0.99577 1.18811 0.97537 0.91289 0.85542 1.86125 1.77774 1.46046 1.11670 1.22891 1.00711 0.96208 0.82944 1.21748 1.02603 1.00813 0.95374 0.92005 0.92515 0.92437 0.90986 0.90997 0.92850 0.92834 0.82323 0.91580 0.83266 0.91531 0.91660 0.91664 0.91522 0.90320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.12 9.91 37.16 0.37 -0.75 16 2 C -0.12 -1.15 6.30 -26.73 -0.17 -1.31 16 3 C 0.06 0.78 6.06 37.16 0.23 1.00 16 4 O -0.31 -4.71 9.27 -33.85 -0.31 -5.03 16 5 C 0.08 1.31 5.74 -38.89 -0.22 1.08 16 6 C -0.03 -0.46 6.32 -39.46 -0.25 -0.71 16 7 Cl -0.05 -0.75 28.48 -51.86 -1.48 -2.23 16 8 C -0.09 -1.69 9.38 -39.13 -0.37 -2.05 16 9 C -0.04 -0.74 5.87 -104.98 -0.62 -1.36 16 10 C 0.43 10.66 7.83 34.47 0.27 10.93 16 11 O -0.55 -14.66 15.58 -19.29 -0.30 -14.96 16 12 O -0.20 -5.52 8.98 -21.78 -0.20 -5.71 16 13 C -0.37 -10.69 9.65 30.94 0.30 -10.39 16 14 H 0.10 2.84 6.86 -52.49 -0.36 2.48 16 15 C 0.04 1.16 5.49 -17.52 -0.10 1.06 16 16 N -0.85 -23.94 13.67 55.49 0.76 -23.18 16 17 Si 0.95 20.52 29.55 -169.99 -5.02 15.49 16 18 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 19 H -0.28 -5.74 7.11 56.52 0.40 -5.34 16 20 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 21 C -0.15 -2.60 8.58 -39.03 -0.33 -2.93 16 22 C 0.11 1.84 6.69 -39.19 -0.26 1.58 16 23 O -0.30 -4.32 9.91 -34.43 -0.34 -4.66 16 24 C 0.05 0.53 5.46 37.16 0.20 0.74 16 25 C -0.15 -1.24 10.28 37.16 0.38 -0.86 16 26 H 0.06 0.39 8.14 -51.93 -0.42 -0.03 16 27 H 0.06 0.41 8.14 -51.93 -0.42 -0.02 16 28 H 0.06 0.42 8.14 -51.93 -0.42 0.00 16 29 H 0.07 0.69 8.14 -51.93 -0.42 0.27 16 30 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 31 H 0.05 0.63 8.14 -51.93 -0.42 0.21 16 32 H 0.05 0.64 8.14 -51.93 -0.42 0.21 16 33 H 0.16 3.16 7.60 -52.49 -0.40 2.76 16 34 H 0.27 7.06 8.31 -40.82 -0.34 6.73 16 35 H 0.15 2.49 5.87 -52.48 -0.31 2.18 16 36 H 0.07 0.74 7.66 -51.93 -0.40 0.34 16 37 H 0.07 0.70 7.66 -51.93 -0.40 0.31 16 38 H 0.06 0.52 8.14 -51.93 -0.42 0.10 16 39 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 40 H 0.08 0.51 8.14 -51.92 -0.42 0.09 16 LS Contribution 365.71 15.07 5.51 5.51 Total: -1.00 -31.41 365.71 -7.18 -38.59 By element: Atomic # 1 Polarization: 5.37 SS G_CDS: -5.22 Total: 0.15 kcal Atomic # 6 Polarization: -3.41 SS G_CDS: -0.57 Total: -3.98 kcal Atomic # 7 Polarization: -23.94 SS G_CDS: 0.76 Total: -23.18 kcal Atomic # 8 Polarization: -29.21 SS G_CDS: -1.15 Total: -30.36 kcal Atomic # 14 Polarization: 20.52 SS G_CDS: -5.02 Total: 15.49 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -1.48 Total: -2.23 kcal Total LS contribution 5.51 Total: 5.51 kcal Total: -31.41 -7.18 -38.59 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000058028402.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.961 kcal (2) G-P(sol) polarization free energy of solvation -31.414 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -139.376 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.592 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.554 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds