Wall clock time and date at job start Tue Mar 31 2020 15:42:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42907 * 109.47372 * 2 1 4 4 C 1.50693 * 109.47164 * 120.00067 * 2 1 3 5 5 O 1.20827 * 120.00365 * 94.99834 * 4 2 1 6 6 O 1.34233 * 119.99944 * 274.99758 * 4 2 1 7 7 C 1.45206 * 116.99584 * 179.97438 * 6 4 2 8 8 C 1.53006 * 109.46492 * 180.02562 * 7 6 4 9 9 O 1.42893 * 109.47187 * 65.00126 * 8 7 6 10 10 C 1.42902 * 113.99940 * 179.97438 * 9 8 7 11 11 C 1.50698 * 109.47523 * 180.02562 * 10 9 8 12 12 H 1.08006 * 119.99532 * 359.97438 * 11 10 9 13 13 C 1.37875 * 120.00387 * 179.97438 * 11 10 9 14 14 N 1.31517 * 120.00141 * 359.97438 * 13 11 10 15 15 Si 1.86805 * 119.99968 * 179.97438 * 13 11 10 16 16 H 1.48490 * 109.47220 * 59.99969 * 15 13 11 17 17 H 1.48498 * 109.46825 * 180.02562 * 15 13 11 18 18 H 1.48497 * 109.46887 * 299.99837 * 15 13 11 19 19 C 1.50700 * 109.47036 * 240.00097 * 2 1 3 20 20 C 1.38239 * 119.98824 * 330.29825 * 19 2 1 21 21 C 1.38212 * 120.01553 * 180.25745 * 20 19 2 22 22 C 1.38361 * 119.98341 * 359.46433 * 21 20 19 23 23 Cl 1.73597 * 120.00859 * 180.27890 * 22 21 20 24 24 C 1.38346 * 119.97306 * 0.25744 * 22 21 20 25 25 C 1.38210 * 119.98768 * 0.02562 * 24 22 21 26 26 H 1.08995 * 109.47390 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47044 * 300.00366 * 1 2 3 28 28 H 1.09005 * 109.46825 * 59.99839 * 1 2 3 29 29 H 0.96696 * 114.00075 * 180.02562 * 3 2 1 30 30 H 1.08998 * 109.47460 * 299.99826 * 7 6 4 31 31 H 1.08998 * 109.47300 * 60.00612 * 7 6 4 32 32 H 1.09000 * 109.46925 * 185.00029 * 8 7 6 33 33 H 1.08997 * 109.47010 * 304.99606 * 8 7 6 34 34 H 1.09000 * 109.47216 * 299.99789 * 10 9 8 35 35 H 1.08997 * 109.47185 * 59.99651 * 10 9 8 36 36 H 0.96997 * 120.00071 * 180.02562 * 14 13 11 37 37 H 1.08004 * 119.99430 * 359.97438 * 20 19 2 38 38 H 1.08002 * 120.01126 * 179.75014 * 21 20 19 39 39 H 1.08002 * 120.00348 * 180.02562 * 24 22 21 40 40 H 1.08002 * 119.99295 * 179.97438 * 25 24 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.0323 -0.7104 1.2304 5 8 2.3197 -1.8827 1.1762 6 8 2.1606 -0.0407 2.3867 7 6 2.6496 -0.7890 3.5310 8 6 2.7279 0.1345 4.7484 9 8 1.4123 0.5598 5.1090 10 6 1.3729 1.4307 6.2413 11 6 -0.0555 1.8137 6.5311 12 1 -0.8535 1.4307 5.9122 13 6 -0.3437 2.6530 7.5863 14 7 0.6279 3.1190 8.3403 15 14 -2.1143 3.1283 7.9450 16 1 -2.9066 1.9057 8.2324 17 1 -2.1552 4.0332 9.1217 18 1 -2.6885 3.8245 6.7657 19 6 2.0323 -0.7104 -1.2305 20 6 1.2821 -1.7232 -1.7982 21 6 1.7447 -2.3787 -2.9236 22 6 2.9538 -2.0135 -3.4885 23 17 3.5321 -2.8315 -4.9062 24 6 3.7015 -0.9959 -2.9232 25 6 3.2405 -0.3452 -1.7944 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 2.9704 1.4236 -0.0004 30 1 1.9691 -1.6134 3.7439 31 1 3.6411 -1.1841 3.3099 32 1 3.1778 -0.4025 5.5834 33 1 3.3374 1.0049 4.5055 34 1 1.7945 0.9202 7.1072 35 1 1.9543 2.3280 6.0299 36 1 0.4250 3.7092 9.0829 37 1 0.3363 -2.0055 -1.3596 38 1 1.1604 -3.1727 -3.3648 39 1 4.6452 -0.7102 -3.3639 40 1 3.8243 0.4489 -1.3528 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000815502524.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:42:18 Heat of formation + Delta-G solvation = -161.486949 kcal Electronic energy + Delta-G solvation = -25020.265298 eV Core-core repulsion = 21019.443710 eV Total energy + Delta-G solvation = -4000.821588 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 328.096 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -41.17540 -39.63595 -37.64740 -37.01483 -36.61284 -36.09769 -32.83313 -32.77446 -31.42342 -30.29622 -29.48450 -26.98758 -25.33478 -23.27557 -23.10171 -22.39084 -21.82386 -20.48879 -18.92798 -17.87147 -17.06704 -16.68162 -16.40899 -16.31018 -15.96576 -15.35058 -15.03584 -14.75093 -14.44342 -14.16610 -13.99884 -13.90320 -13.83342 -13.20528 -13.01121 -12.74484 -12.48252 -12.38943 -12.19875 -11.94217 -11.89216 -11.79217 -11.45672 -11.21954 -11.10116 -10.96540 -10.84935 -10.77783 -10.45977 -10.18270 -10.03960 -9.46889 -9.15677 -9.07798 -8.88863 -8.22830 -6.12653 -4.14438 0.59593 0.86435 1.70784 1.99932 2.51223 3.22390 3.31790 3.34343 3.38240 3.73762 4.02336 4.24593 4.30871 4.41704 4.50481 4.63713 4.70181 4.84413 5.02450 5.13854 5.17769 5.23842 5.35877 5.39307 5.41535 5.49285 5.69357 5.77077 5.80988 5.86097 5.90015 6.01397 6.02635 6.29150 6.44695 7.03352 7.05580 7.38274 7.68449 7.76790 8.11185 8.50430 8.97389 9.50195 10.98805 Molecular weight = 328.10amu Principal moments of inertia in cm(-1) A = 0.028299 B = 0.002130 C = 0.002068 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 989.213690 B =13143.193602 C =13536.332534 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.193 3.807 3 O -0.523 6.523 4 C 0.435 3.565 5 O -0.500 6.500 6 O -0.325 6.325 7 C 0.071 3.929 8 C 0.062 3.938 9 O -0.390 6.390 10 C 0.195 3.805 11 C -0.515 4.515 12 H 0.066 0.934 13 C 0.056 3.944 14 N -0.899 5.899 15 Si 0.909 3.091 16 H -0.275 1.275 17 H -0.286 1.286 18 H -0.274 1.274 19 C -0.099 4.099 20 C -0.077 4.077 21 C -0.108 4.108 22 C -0.029 4.029 23 Cl -0.070 7.070 24 C -0.108 4.108 25 C -0.093 4.093 26 H 0.081 0.919 27 H 0.088 0.912 28 H 0.086 0.914 29 H 0.381 0.619 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.063 0.937 33 H 0.050 0.950 34 H 0.006 0.994 35 H 0.008 0.992 36 H 0.265 0.735 37 H 0.139 0.861 38 H 0.137 0.863 39 H 0.137 0.863 40 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.456 -9.384 -24.405 26.932 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.151 3.849 3 O -0.330 6.330 4 C 0.276 3.724 5 O -0.389 6.389 6 O -0.240 6.240 7 C -0.003 4.003 8 C -0.015 4.015 9 O -0.310 6.310 10 C 0.121 3.879 11 C -0.553 4.553 12 H 0.084 0.916 13 C -0.145 4.145 14 N -0.538 5.538 15 Si 0.736 3.264 16 H -0.200 1.200 17 H -0.212 1.212 18 H -0.199 1.199 19 C -0.100 4.100 20 C -0.095 4.095 21 C -0.127 4.127 22 C -0.055 4.055 23 Cl -0.041 7.041 24 C -0.126 4.126 25 C -0.111 4.111 26 H 0.100 0.900 27 H 0.107 0.893 28 H 0.105 0.895 29 H 0.230 0.770 30 H 0.096 0.904 31 H 0.096 0.904 32 H 0.081 0.919 33 H 0.069 0.931 34 H 0.024 0.976 35 H 0.025 0.975 36 H 0.074 0.926 37 H 0.157 0.843 38 H 0.155 0.845 39 H 0.155 0.845 40 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 5.837 -9.604 -24.424 26.886 hybrid contribution 0.242 0.000 0.466 0.525 sum 6.079 -9.604 -23.958 26.518 Atomic orbital electron populations 1.21921 0.88746 1.03785 1.05715 1.19750 0.97263 0.81946 0.85983 1.86739 1.27297 1.22548 1.96386 1.24428 0.75365 0.86657 0.85931 1.90676 1.45508 1.17043 1.85626 1.86685 1.76051 1.43251 1.18043 1.23297 0.99308 0.94984 0.82694 1.22305 0.88849 0.97136 0.93249 1.87916 1.23478 1.67916 1.51698 1.20235 0.98163 0.87562 0.81969 1.20997 0.92084 1.28669 1.13573 0.91568 1.24951 0.98216 0.95719 0.95627 1.69949 1.31851 1.33428 1.18549 0.86377 0.83815 0.78433 0.77753 1.20022 1.21153 1.19943 1.20083 0.95734 0.97694 0.96454 1.21038 0.99981 0.94006 0.94505 1.21066 0.94824 1.00508 0.96305 1.21001 0.96177 0.97014 0.91350 1.98379 1.88641 1.78303 1.38821 1.20970 1.00189 0.95280 0.96186 1.20839 0.95052 0.99527 0.95676 0.89999 0.89264 0.89544 0.77004 0.90400 0.90430 0.91912 0.93137 0.97631 0.97457 0.92572 0.84316 0.84470 0.84519 0.84963 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.49 8.12 37.16 0.30 -1.19 16 2 C 0.19 2.20 1.22 -92.93 -0.11 2.08 16 3 O -0.52 -5.83 12.51 -49.12 -0.61 -6.44 16 4 C 0.44 6.18 6.79 36.00 0.24 6.42 16 5 O -0.50 -7.86 15.99 -18.75 -0.30 -8.16 16 6 O -0.33 -5.29 9.94 -45.98 -0.46 -5.75 16 7 C 0.07 1.10 5.85 37.16 0.22 1.31 16 8 C 0.06 1.12 6.33 37.16 0.24 1.35 16 9 O -0.39 -9.37 10.30 -38.80 -0.40 -9.77 16 10 C 0.19 5.30 5.69 36.00 0.20 5.51 16 11 C -0.52 -15.13 9.43 -34.44 -0.32 -15.46 16 12 H 0.07 1.93 7.81 -52.48 -0.41 1.52 16 13 C 0.06 1.62 5.46 -17.82 -0.10 1.52 16 14 N -0.90 -26.71 13.29 55.43 0.74 -25.97 16 15 Si 0.91 21.77 29.54 -169.99 -5.02 16.75 16 16 H -0.27 -6.45 7.11 56.52 0.40 -6.05 16 17 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 18 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 19 C -0.10 -0.99 4.24 -104.62 -0.44 -1.43 16 20 C -0.08 -0.71 9.11 -39.59 -0.36 -1.07 16 21 C -0.11 -0.92 9.83 -39.55 -0.39 -1.31 16 22 C -0.03 -0.25 6.32 -39.50 -0.25 -0.50 16 23 Cl -0.07 -0.57 28.96 -51.86 -1.50 -2.07 16 24 C -0.11 -0.88 9.83 -39.55 -0.39 -1.27 16 25 C -0.09 -0.80 9.32 -39.59 -0.37 -1.17 16 26 H 0.08 0.72 6.51 -51.93 -0.34 0.38 16 27 H 0.09 1.06 8.14 -51.93 -0.42 0.64 16 28 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 29 H 0.38 2.90 7.32 45.56 0.33 3.23 16 30 H 0.08 1.23 8.13 -51.93 -0.42 0.81 16 31 H 0.08 0.99 8.13 -51.93 -0.42 0.57 16 32 H 0.06 1.02 8.14 -51.93 -0.42 0.60 16 33 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 34 H 0.01 0.16 8.14 -51.93 -0.42 -0.26 16 35 H 0.01 0.21 8.14 -51.93 -0.42 -0.21 16 36 H 0.26 7.38 8.31 -40.82 -0.34 7.04 16 37 H 0.14 1.07 6.16 -52.48 -0.32 0.74 16 38 H 0.14 0.90 8.06 -52.49 -0.42 0.48 16 39 H 0.14 0.86 8.06 -52.49 -0.42 0.43 16 40 H 0.13 0.82 6.49 -52.49 -0.34 0.48 16 LS Contribution 363.20 15.07 5.47 5.47 Total: -1.00 -34.24 363.20 -8.06 -42.30 By element: Atomic # 1 Polarization: 3.29 SS G_CDS: -4.44 Total: -1.15 kcal Atomic # 6 Polarization: -3.67 SS G_CDS: -1.53 Total: -5.20 kcal Atomic # 7 Polarization: -26.71 SS G_CDS: 0.74 Total: -25.97 kcal Atomic # 8 Polarization: -28.35 SS G_CDS: -1.77 Total: -30.12 kcal Atomic # 14 Polarization: 21.77 SS G_CDS: -5.02 Total: 16.75 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.50 Total: -2.07 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -34.24 -8.06 -42.30 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000815502524.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.189 kcal (2) G-P(sol) polarization free energy of solvation -34.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -153.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.056 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.298 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.487 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds