Wall clock time and date at job start Tue Mar 31 2020 14:59:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31161 * 1 3 3 Cl 1.73593 * 120.00441 * 2 1 4 4 C 1.50701 * 119.99661 * 180.02562 * 2 1 3 5 5 C 1.52996 * 109.47490 * 6.89921 * 4 2 1 6 6 C 1.53007 * 109.47346 * 246.90038 * 4 2 1 7 7 C 1.50696 * 109.47203 * 126.90147 * 4 2 1 8 8 O 1.21282 * 120.00209 * 125.86235 * 7 4 2 9 9 N 1.34781 * 120.00070 * 305.86327 * 7 4 2 10 10 C 1.46926 * 120.62733 * 355.13504 * 9 7 4 11 11 C 1.53189 * 108.77531 * 126.41522 * 10 9 7 12 12 C 1.53048 * 109.30941 * 54.63443 * 11 10 9 13 13 H 1.09008 * 109.44214 * 178.62342 * 12 11 10 14 14 N 1.46494 * 109.46190 * 58.65893 * 12 11 10 15 15 C 1.36936 * 120.00467 * 84.92704 * 14 12 11 16 16 H 1.08003 * 119.99640 * 0.02562 * 15 14 12 17 17 C 1.38812 * 120.00394 * 179.97438 * 15 14 12 18 18 N 1.31618 * 119.99994 * 180.02562 * 17 15 14 19 19 Si 1.86797 * 119.99713 * 0.02562 * 17 15 14 20 20 H 1.48502 * 109.47151 * 90.00132 * 19 17 15 21 21 H 1.48501 * 109.46968 * 209.99908 * 19 17 15 22 22 H 1.48494 * 109.47363 * 329.99625 * 19 17 15 23 23 C 1.53035 * 109.53655 * 298.63374 * 12 11 10 24 24 H 1.09000 * 109.50114 * 301.38185 * 23 12 11 25 25 C 1.53002 * 109.49441 * 181.31883 * 23 12 11 26 26 C 1.53005 * 109.47052 * 175.00223 * 25 23 12 27 27 C 1.46923 * 120.63315 * 175.16096 * 9 7 4 28 28 H 1.07994 * 120.00450 * 180.02562 * 1 2 3 29 29 H 1.07995 * 119.99375 * 359.97438 * 1 2 3 30 30 H 1.08998 * 109.47720 * 175.15744 * 5 4 2 31 31 H 1.08999 * 109.47209 * 295.15563 * 5 4 2 32 32 H 1.09004 * 109.46763 * 55.15221 * 5 4 2 33 33 H 1.08998 * 109.46420 * 304.93086 * 6 4 2 34 34 H 1.08999 * 109.46809 * 64.92794 * 6 4 2 35 35 H 1.08996 * 109.47046 * 184.93297 * 6 4 2 36 36 H 1.08999 * 109.58691 * 6.62454 * 10 9 7 37 37 H 1.08998 * 109.58343 * 246.20211 * 10 9 7 38 38 H 1.08998 * 109.49520 * 294.68454 * 11 10 9 39 39 H 1.08993 * 109.49925 * 174.58193 * 11 10 9 40 40 H 0.97004 * 119.99550 * 264.93260 * 14 12 11 41 41 H 0.96997 * 119.99645 * 180.02562 * 18 17 15 42 42 H 1.08997 * 109.47451 * 294.99876 * 25 23 12 43 43 H 1.09000 * 109.47429 * 55.00573 * 25 23 12 44 44 H 1.09007 * 109.47174 * 299.99806 * 26 25 23 45 45 H 1.08997 * 109.47425 * 59.99768 * 26 25 23 46 46 H 1.08998 * 109.47032 * 180.02562 * 26 25 23 47 47 H 1.09007 * 109.58848 * 113.79515 * 27 9 7 48 48 H 1.09007 * 109.58614 * 353.37391 * 27 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3116 0.0000 0.0000 3 17 2.1797 1.5033 0.0000 4 6 2.0650 -1.3052 -0.0006 5 6 1.0799 -2.4627 -0.1744 6 6 2.8102 -1.4646 1.3262 7 6 3.0550 -1.3132 -1.1367 8 8 4.2263 -1.5404 -0.9189 9 7 2.6388 -1.0679 -2.3950 10 6 1.2099 -0.8962 -2.6907 11 6 1.0154 0.4312 -3.4302 12 6 1.9206 0.4605 -4.6639 13 1 1.7660 1.3939 -5.2053 14 7 1.5932 -0.6698 -5.5365 15 6 0.5726 -0.5619 -6.4431 16 1 0.0093 0.3568 -6.5151 17 6 0.2628 -1.6327 -7.2702 18 7 -0.7179 -1.5287 -8.1419 19 14 1.2376 -3.2213 -7.1460 20 1 0.5938 -4.1210 -6.1554 21 1 1.2691 -3.8877 -8.4728 22 1 2.6247 -2.9182 -6.7113 23 6 3.3840 0.3606 -4.2275 24 1 3.6216 1.1881 -3.5589 25 6 4.2896 0.4231 -5.4592 26 6 5.7535 0.4487 -5.0151 27 6 3.6053 -0.9676 -3.4970 28 1 -0.5400 -0.9352 0.0004 29 1 -0.5399 0.9353 0.0004 30 1 1.6310 -3.3991 -0.2611 31 1 0.4180 -2.5095 0.6904 32 1 0.4886 -2.3043 -1.0763 33 1 3.4476 -0.5959 1.4915 34 1 2.0897 -1.5466 2.1400 35 1 3.4241 -2.3645 1.2923 36 1 0.6432 -0.8823 -1.7597 37 1 0.8654 -1.7181 -3.3183 38 1 1.2752 1.2576 -2.7687 39 1 -0.0252 0.5259 -3.7402 40 1 2.0994 -1.4948 -5.4719 41 1 -0.9346 -2.2771 -8.7196 42 1 4.1147 -0.4531 -6.0836 43 1 4.0668 1.3254 -6.0286 44 1 5.9285 1.3249 -4.3907 45 1 5.9764 -0.4535 -4.4456 46 1 6.3986 0.4937 -5.8925 47 1 3.4561 -1.7953 -4.1904 48 1 4.6192 -1.0007 -3.0980 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001037861657.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 14:59:06 Heat of formation + Delta-G solvation = -7.110070 kcal Electronic energy + Delta-G solvation = -28623.110109 eV Core-core repulsion = 24932.941746 eV Total energy + Delta-G solvation = -3690.168364 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 328.166 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -40.86289 -38.36210 -37.21428 -35.90850 -34.38881 -33.81598 -31.76461 -31.05134 -29.78947 -28.90383 -27.51193 -25.85849 -23.92603 -23.55435 -22.96771 -20.92285 -20.58389 -18.92195 -18.15546 -17.89056 -17.34898 -16.11143 -15.74007 -15.08004 -15.00645 -14.51214 -14.32922 -14.25670 -13.75475 -13.48074 -13.31016 -13.24448 -12.87700 -12.81606 -12.56283 -12.46956 -12.32202 -12.16906 -12.07954 -11.82762 -11.58328 -11.55643 -11.35120 -11.23320 -11.05003 -10.88740 -10.85500 -10.75829 -10.36120 -10.30466 -10.21534 -9.82129 -9.79564 -9.56544 -9.07051 -8.87386 -8.32488 -7.28703 -5.80373 -3.15092 1.62676 2.05055 2.67884 3.14531 3.32030 3.35263 3.41902 4.21337 4.39870 4.54801 4.66830 4.80075 5.03048 5.13090 5.22095 5.26979 5.34675 5.36400 5.40833 5.48722 5.52651 5.56295 5.59100 5.61143 5.67316 5.68261 5.79436 5.82051 5.91620 5.91802 5.99771 6.04229 6.05749 6.11023 6.22014 6.28854 6.35335 6.46534 6.53811 6.60593 6.68788 6.78538 6.91697 7.60883 7.96602 8.26855 8.38934 9.17473 9.90216 10.10486 11.38164 Molecular weight = 328.17amu Principal moments of inertia in cm(-1) A = 0.013398 B = 0.004974 C = 0.004554 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2089.416797 B = 5627.672106 C = 6147.072935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.057 4.057 3 Cl -0.074 7.074 4 C -0.044 4.044 5 C -0.156 4.156 6 C -0.124 4.124 7 C 0.527 3.473 8 O -0.544 6.544 9 N -0.594 5.594 10 C 0.090 3.910 11 C -0.148 4.148 12 C 0.186 3.814 13 H 0.058 0.942 14 N -0.743 5.743 15 C -0.238 4.238 16 H 0.090 0.910 17 C 0.007 3.993 18 N -0.934 5.934 19 Si 0.877 3.123 20 H -0.286 1.286 21 H -0.291 1.291 22 H -0.278 1.278 23 C -0.105 4.105 24 H 0.071 0.929 25 C -0.111 4.111 26 C -0.154 4.154 27 C 0.118 3.882 28 H 0.132 0.868 29 H 0.118 0.882 30 H 0.072 0.928 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.065 0.935 34 H 0.063 0.937 35 H 0.072 0.928 36 H 0.092 0.908 37 H 0.076 0.924 38 H 0.055 0.945 39 H 0.077 0.923 40 H 0.360 0.640 41 H 0.259 0.741 42 H 0.070 0.930 43 H 0.066 0.934 44 H 0.049 0.951 45 H 0.052 0.948 46 H 0.050 0.950 47 H 0.065 0.935 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.690 2.624 18.142 18.922 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C -0.084 4.084 3 Cl -0.046 7.046 4 C -0.048 4.048 5 C -0.214 4.214 6 C -0.182 4.182 7 C 0.314 3.686 8 O -0.422 6.422 9 N -0.325 5.325 10 C -0.032 4.032 11 C -0.189 4.189 12 C 0.076 3.924 13 H 0.076 0.924 14 N -0.387 5.387 15 C -0.368 4.368 16 H 0.108 0.892 17 C -0.189 4.189 18 N -0.582 5.582 19 Si 0.707 3.293 20 H -0.212 1.212 21 H -0.218 1.218 22 H -0.204 1.204 23 C -0.125 4.125 24 H 0.090 0.910 25 C -0.149 4.149 26 C -0.211 4.211 27 C -0.004 4.004 28 H 0.150 0.850 29 H 0.137 0.863 30 H 0.091 0.909 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.084 0.916 34 H 0.082 0.918 35 H 0.091 0.909 36 H 0.109 0.891 37 H 0.095 0.905 38 H 0.073 0.927 39 H 0.095 0.905 40 H 0.194 0.806 41 H 0.069 0.931 42 H 0.089 0.911 43 H 0.084 0.916 44 H 0.068 0.932 45 H 0.071 0.929 46 H 0.069 0.931 47 H 0.083 0.917 48 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 5.200 2.707 18.076 19.003 hybrid contribution 0.496 -1.045 -0.194 1.173 sum 5.696 1.662 17.882 18.841 Atomic orbital electron populations 1.24216 0.93711 1.04539 0.98890 1.22959 0.93644 0.87238 1.04554 1.98389 1.77997 1.31449 1.96734 1.19969 0.95893 0.92439 0.96480 1.22277 0.98683 0.96718 1.03678 1.21656 0.99833 1.03775 0.92927 1.20090 0.88608 0.76607 0.83320 1.90655 1.18123 1.49637 1.83750 1.48051 1.08459 1.69231 1.06806 1.22346 0.79982 0.99830 1.01022 1.22467 1.02376 0.95620 0.98394 1.20173 0.90021 0.92343 0.89880 0.92358 1.42840 1.40154 1.12683 1.43021 1.19055 1.07086 1.00364 1.10272 0.89195 1.24616 0.98226 0.97606 0.98427 1.69688 1.31562 1.31603 1.25306 0.86683 0.80137 0.85313 0.77138 1.21238 1.21778 1.20409 1.21780 0.96983 0.97030 0.96728 0.91014 1.21436 0.93253 1.03211 0.97025 1.21855 0.96941 1.01450 1.00842 1.21678 0.93192 0.97767 0.87801 0.85020 0.86337 0.90914 0.90686 0.90157 0.91563 0.91783 0.90946 0.89070 0.90535 0.92657 0.90462 0.80643 0.93118 0.91135 0.91566 0.93156 0.92888 0.93077 0.91712 0.89395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.54 11.79 28.97 0.34 -1.20 16 2 C -0.06 -0.61 3.59 -36.07 -0.13 -0.74 16 3 Cl -0.07 -0.89 28.09 -51.86 -1.46 -2.35 16 4 C -0.04 -0.51 0.65 -156.81 -0.10 -0.61 16 5 C -0.16 -1.49 6.89 37.16 0.26 -1.23 16 6 C -0.12 -1.32 7.84 37.16 0.29 -1.03 16 7 C 0.53 7.92 6.06 -10.99 -0.07 7.86 16 8 O -0.54 -9.71 15.32 5.56 0.09 -9.63 16 9 N -0.59 -9.05 2.96 -172.77 -0.51 -9.56 16 10 C 0.09 1.32 4.34 -3.71 -0.02 1.31 16 11 C -0.15 -2.32 5.78 -26.61 -0.15 -2.48 16 12 C 0.19 3.30 2.53 -67.89 -0.17 3.13 16 13 H 0.06 1.10 8.08 -51.92 -0.42 0.68 16 14 N -0.74 -15.97 3.53 -53.38 -0.19 -16.16 16 15 C -0.24 -6.22 10.41 -15.06 -0.16 -6.38 16 16 H 0.09 2.55 8.06 -52.48 -0.42 2.12 16 17 C 0.01 0.19 5.50 -17.43 -0.10 0.10 16 18 N -0.93 -28.31 13.97 55.49 0.78 -27.54 16 19 Si 0.88 21.42 27.74 -169.99 -4.71 16.71 16 20 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 21 H -0.29 -7.33 7.11 56.52 0.40 -6.93 16 22 H -0.28 -6.42 6.52 56.52 0.37 -6.05 16 23 C -0.11 -1.65 2.14 -90.50 -0.19 -1.84 16 24 H 0.07 1.09 8.14 -51.93 -0.42 0.66 16 25 C -0.11 -1.70 5.19 -26.73 -0.14 -1.84 16 26 C -0.15 -2.01 9.67 37.16 0.36 -1.65 16 27 C 0.12 1.90 5.02 -3.72 -0.02 1.88 16 28 H 0.13 0.94 5.73 -52.49 -0.30 0.64 16 29 H 0.12 0.95 8.06 -52.49 -0.42 0.53 16 30 H 0.07 0.72 8.14 -51.93 -0.42 0.29 16 31 H 0.07 0.53 7.48 -51.93 -0.39 0.14 16 32 H 0.08 0.80 4.83 -51.93 -0.25 0.55 16 33 H 0.07 0.77 7.85 -51.93 -0.41 0.36 16 34 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 35 H 0.07 0.81 7.87 -51.93 -0.41 0.40 16 36 H 0.09 1.11 1.70 -51.93 -0.09 1.03 16 37 H 0.08 1.29 7.74 -51.93 -0.40 0.89 16 38 H 0.05 0.80 8.02 -51.93 -0.42 0.38 16 39 H 0.08 1.31 8.14 -51.93 -0.42 0.88 16 40 H 0.36 7.83 3.80 -40.82 -0.16 7.67 16 41 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 42 H 0.07 1.22 7.70 -51.93 -0.40 0.82 16 43 H 0.07 1.02 8.14 -51.93 -0.42 0.59 16 44 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 45 H 0.05 0.70 6.70 -51.93 -0.35 0.35 16 46 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 47 H 0.06 1.13 6.64 -51.93 -0.34 0.78 16 48 H 0.09 1.43 5.76 -51.92 -0.30 1.14 16 LS Contribution 371.05 15.07 5.59 5.59 Total: -1.00 -30.56 371.05 -8.02 -38.57 By element: Atomic # 1 Polarization: 16.70 SS G_CDS: -7.60 Total: 9.09 kcal Atomic # 6 Polarization: -4.74 SS G_CDS: 0.01 Total: -4.73 kcal Atomic # 7 Polarization: -53.33 SS G_CDS: 0.08 Total: -53.26 kcal Atomic # 8 Polarization: -9.71 SS G_CDS: 0.09 Total: -9.63 kcal Atomic # 14 Polarization: 21.42 SS G_CDS: -4.71 Total: 16.71 kcal Atomic # 17 Polarization: -0.89 SS G_CDS: -1.46 Total: -2.35 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -30.56 -8.02 -38.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001037861657.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.462 kcal (2) G-P(sol) polarization free energy of solvation -30.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds