Wall clock time and date at job start Tue Mar 31 2020 15:37:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 H 1.09007 * 109.46443 * 2 1 4 4 C 1.50702 * 109.47188 * 119.99623 * 2 1 3 5 5 H 1.07993 * 119.99500 * 120.00262 * 4 2 1 6 6 C 1.37874 * 120.00275 * 300.00427 * 4 2 1 7 7 N 1.31507 * 120.00053 * 179.97438 * 6 4 2 8 8 Si 1.86800 * 119.99846 * 359.97438 * 6 4 2 9 9 H 1.48503 * 109.47495 * 89.99983 * 8 6 4 10 10 H 1.48502 * 109.47190 * 209.99976 * 8 6 4 11 11 H 1.48497 * 109.47204 * 329.99866 * 8 6 4 12 12 N 1.46495 * 109.47246 * 240.00361 * 2 1 3 13 13 C 1.34770 * 120.00402 * 84.99850 * 12 2 1 14 14 O 1.21283 * 120.00084 * 359.97438 * 13 12 2 15 15 C 1.50701 * 119.99982 * 180.02562 * 13 12 2 16 16 H 1.08995 * 109.51726 * 55.10133 * 15 13 12 17 17 C 1.53297 * 109.50972 * 294.99257 * 15 13 12 18 18 N 1.47150 * 108.41463 * 187.75636 * 17 15 13 19 19 C 1.34777 * 120.98603 * 230.54242 * 18 17 15 20 20 O 1.21511 * 119.99528 * 0.02562 * 19 18 17 21 21 O 1.34633 * 120.00504 * 180.02562 * 19 18 17 22 22 C 1.45198 * 116.99962 * 179.97438 * 21 19 18 23 23 C 1.53002 * 109.47113 * 60.00463 * 22 21 19 24 24 C 1.53007 * 109.46824 * 180.02562 * 22 21 19 25 25 C 1.53002 * 109.47450 * 300.00119 * 22 21 19 26 26 C 1.47227 * 117.98768 * 50.52570 * 18 17 15 27 27 C 1.53299 * 108.40126 * 309.48190 * 26 18 17 28 28 O 1.42959 * 109.22435 * 52.30769 * 27 26 18 29 29 H 1.09006 * 109.46908 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47688 * 299.99833 * 1 2 3 31 31 H 1.08999 * 109.47525 * 60.00216 * 1 2 3 32 32 H 0.97002 * 119.99830 * 179.97438 * 7 6 4 33 33 H 0.97008 * 119.99715 * 264.99395 * 12 2 1 34 34 H 1.09002 * 109.68431 * 307.50251 * 17 15 13 35 35 H 1.08999 * 109.67914 * 68.01837 * 17 15 13 36 36 H 1.08998 * 109.47047 * 59.99583 * 23 22 21 37 37 H 1.09000 * 109.47147 * 179.97438 * 23 22 21 38 38 H 1.08995 * 109.46929 * 299.99921 * 23 22 21 39 39 H 1.08998 * 109.47308 * 60.00056 * 24 22 21 40 40 H 1.09000 * 109.47085 * 180.02562 * 24 22 21 41 41 H 1.09005 * 109.47156 * 299.99852 * 24 22 21 42 42 H 1.08995 * 109.46838 * 59.99928 * 25 22 21 43 43 H 1.09000 * 109.47153 * 180.02562 * 25 22 21 44 44 H 1.08998 * 109.47040 * 300.00162 * 25 22 21 45 45 H 1.09000 * 109.67268 * 189.75452 * 26 18 17 46 46 H 1.09002 * 109.70663 * 69.23167 * 26 18 17 47 47 H 1.08996 * 109.51416 * 292.37699 * 27 26 18 48 48 H 1.09006 * 109.50766 * 172.23087 * 27 26 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8932 1.0278 0.0000 4 6 2.0324 -0.7103 1.2305 5 1 2.6533 -1.5883 1.1314 6 6 1.6993 -0.2393 2.4828 7 7 2.1372 -0.8595 3.5565 8 14 0.6258 1.2798 2.6541 9 1 -0.8021 0.8745 2.6992 10 1 0.9771 1.9954 3.9070 11 1 0.8491 2.1773 1.4923 12 7 2.0184 -0.6905 -1.1962 13 6 2.1471 -0.0182 -2.3571 14 8 1.8582 1.1585 -2.4117 15 6 2.6489 -0.7288 -3.5877 16 1 2.0269 -1.6022 -3.7829 17 6 4.0997 -1.1722 -3.3670 18 7 4.6252 -1.6928 -4.6390 19 6 5.2351 -2.8932 -4.6984 20 8 5.3572 -3.5630 -3.6920 21 8 5.7091 -3.3502 -5.8727 22 6 6.3548 -4.6507 -5.8618 23 6 5.3610 -5.7094 -5.3797 24 6 6.8253 -4.9983 -7.2756 25 6 7.5589 -4.6144 -4.9186 26 6 4.4642 -0.8629 -5.8444 27 6 2.9957 -0.4345 -5.9444 28 8 2.5931 0.1583 -4.7074 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3634 0.5138 -0.8900 32 1 1.9032 -0.5279 4.4375 33 1 2.2491 -1.6317 -1.1526 34 1 4.6986 -0.3209 -3.0432 35 1 4.1331 -1.9542 -2.6085 36 1 4.5031 -5.7352 -6.0517 37 1 5.8455 -6.6857 -5.3719 38 1 5.0261 -5.4615 -4.3725 39 1 7.5334 -4.2440 -7.6187 40 1 7.3096 -5.9748 -7.2675 41 1 5.9677 -5.0241 -7.9479 42 1 7.2241 -4.3665 -3.9114 43 1 8.0438 -5.5906 -4.9107 44 1 8.2669 -3.8602 -5.2620 45 1 4.7390 -1.4406 -6.7270 46 1 5.0999 0.0195 -5.7708 47 1 2.3751 -1.3069 -6.1491 48 1 2.8822 0.2910 -6.7499 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000371979191.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:37:58 Heat of formation + Delta-G solvation = -147.461202 kcal Electronic energy + Delta-G solvation = -29572.502919 eV Core-core repulsion = 25435.539308 eV Total energy + Delta-G solvation = -4136.963610 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 328.188 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.18079 -39.91812 -38.42454 -37.16007 -35.25357 -34.89074 -34.05721 -32.62122 -31.80945 -29.83073 -28.06952 -27.70216 -27.62575 -25.34333 -25.03042 -23.44104 -21.79763 -20.97202 -19.70656 -19.56410 -18.40437 -17.41451 -17.04937 -16.58851 -16.48238 -16.08445 -15.64534 -15.52332 -15.25178 -14.83317 -14.73475 -14.45433 -13.89400 -13.87299 -13.82238 -13.48700 -12.97621 -12.84547 -12.71872 -12.49949 -12.46317 -12.20304 -12.17661 -12.04656 -11.88477 -11.74581 -11.68435 -11.56196 -11.25489 -11.03613 -10.81230 -10.63216 -10.38279 -10.18991 -10.17965 -9.70915 -9.24294 -9.21394 -8.85441 -8.76263 -8.22399 -6.20326 -4.23364 1.78383 2.61232 3.06360 3.12754 3.24242 3.36389 3.40896 3.47734 4.17895 4.32135 4.42113 4.46236 4.47330 4.61730 4.65193 4.81412 4.86049 4.99705 5.11622 5.14329 5.17404 5.24097 5.25419 5.34878 5.40632 5.44383 5.48349 5.51497 5.59296 5.68638 5.69464 5.96742 6.04967 6.12668 6.20943 6.29882 6.36130 6.54414 6.80901 6.87352 7.07309 7.17752 7.23634 7.48860 8.09941 8.10834 8.47276 8.74190 8.84822 9.39718 10.91720 Molecular weight = 328.19amu Principal moments of inertia in cm(-1) A = 0.017116 B = 0.002994 C = 0.002650 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1635.514459 B = 9348.630321 C =10562.764055 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.238 3.762 3 H 0.050 0.950 4 C -0.536 4.536 5 H 0.082 0.918 6 C 0.079 3.921 7 N -0.891 5.891 8 Si 0.885 3.115 9 H -0.276 1.276 10 H -0.294 1.294 11 H -0.261 1.261 12 N -0.696 5.696 13 C 0.513 3.487 14 O -0.528 6.528 15 C 0.061 3.939 16 H 0.087 0.913 17 C 0.105 3.895 18 N -0.599 5.599 19 C 0.655 3.345 20 O -0.559 6.559 21 O -0.363 6.363 22 C 0.135 3.865 23 C -0.184 4.184 24 C -0.140 4.140 25 C -0.184 4.184 26 C 0.076 3.924 27 C 0.046 3.954 28 O -0.347 6.347 29 H 0.054 0.946 30 H 0.048 0.952 31 H 0.036 0.964 32 H 0.267 0.733 33 H 0.397 0.603 34 H 0.089 0.911 35 H 0.115 0.885 36 H 0.059 0.941 37 H 0.070 0.930 38 H 0.089 0.911 39 H 0.066 0.934 40 H 0.080 0.920 41 H 0.066 0.934 42 H 0.089 0.911 43 H 0.070 0.930 44 H 0.059 0.941 45 H 0.102 0.898 46 H 0.082 0.918 47 H 0.057 0.943 48 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.556 -7.622 -23.807 26.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.135 3.865 3 H 0.068 0.932 4 C -0.574 4.574 5 H 0.100 0.900 6 C -0.125 4.125 7 N -0.528 5.528 8 Si 0.714 3.286 9 H -0.203 1.203 10 H -0.221 1.221 11 H -0.186 1.186 12 N -0.346 5.346 13 C 0.296 3.704 14 O -0.405 6.405 15 C -0.001 4.001 16 H 0.104 0.896 17 C -0.016 4.016 18 N -0.340 5.340 19 C 0.410 3.590 20 O -0.448 6.448 21 O -0.278 6.278 22 C 0.099 3.901 23 C -0.241 4.241 24 C -0.197 4.197 25 C -0.242 4.242 26 C -0.047 4.047 27 C -0.032 4.032 28 O -0.264 6.264 29 H 0.073 0.927 30 H 0.067 0.933 31 H 0.056 0.944 32 H 0.077 0.923 33 H 0.230 0.770 34 H 0.108 0.892 35 H 0.133 0.867 36 H 0.078 0.922 37 H 0.089 0.911 38 H 0.108 0.892 39 H 0.085 0.915 40 H 0.099 0.901 41 H 0.085 0.915 42 H 0.108 0.892 43 H 0.089 0.911 44 H 0.078 0.922 45 H 0.120 0.880 46 H 0.100 0.900 47 H 0.076 0.924 48 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges 7.380 -6.862 -23.326 25.410 hybrid contribution -0.356 -0.086 0.181 0.409 sum 7.024 -6.948 -23.145 25.165 Atomic orbital electron populations 1.22464 0.99185 1.00978 0.99440 1.19147 0.90216 0.94706 0.82392 0.93181 1.21025 1.33392 1.14535 0.88425 0.90024 1.24820 0.95473 0.96685 0.95503 1.69867 1.44817 1.40046 0.98051 0.86888 0.80535 0.83637 0.77503 1.20292 1.22144 1.18595 1.46162 1.65135 1.13973 1.09335 1.19714 0.79441 0.87474 0.83821 1.90695 1.49849 1.15488 1.84427 1.22401 0.96048 0.93459 0.88220 0.89564 1.22267 0.93270 1.01169 0.84941 1.46941 1.59899 1.16621 1.10588 1.17888 0.77448 0.81474 0.82169 1.90938 1.61444 1.57012 1.35357 1.86264 1.70728 1.37837 1.32997 1.22101 0.92191 0.78801 0.97036 1.22525 0.99068 0.98261 1.04296 1.21857 1.01959 1.02193 0.93675 1.22524 0.96856 1.02753 1.02028 1.22499 0.98315 0.96041 0.87842 1.23061 0.93255 0.99403 0.87479 1.88142 1.87225 1.36266 1.14806 0.92710 0.93334 0.94449 0.92258 0.76962 0.89241 0.86651 0.92211 0.91070 0.89192 0.91497 0.90102 0.91514 0.89201 0.91078 0.92200 0.88022 0.90016 0.92446 0.86966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.62 8.96 37.16 0.33 -3.29 16 2 C 0.24 5.65 2.15 -69.08 -0.15 5.50 16 3 H 0.05 1.31 6.63 -51.92 -0.34 0.96 16 4 C -0.54 -14.41 9.31 -34.44 -0.32 -14.73 16 5 H 0.08 2.31 7.98 -52.49 -0.42 1.89 16 6 C 0.08 2.21 5.45 -17.82 -0.10 2.12 16 7 N -0.89 -26.39 13.96 55.43 0.77 -25.62 16 8 Si 0.88 21.74 24.37 -169.99 -4.14 17.59 16 9 H -0.28 -6.56 6.87 56.52 0.39 -6.18 16 10 H -0.29 -7.20 7.11 56.52 0.40 -6.80 16 11 H -0.26 -6.37 6.53 56.52 0.37 -6.00 16 12 N -0.70 -13.66 5.03 -54.93 -0.28 -13.93 16 13 C 0.51 9.75 7.14 -10.99 -0.08 9.67 16 14 O -0.53 -12.19 16.17 -14.28 -0.23 -12.43 16 15 C 0.06 0.89 3.19 -27.73 -0.09 0.80 16 16 H 0.09 1.10 8.14 -51.93 -0.42 0.68 16 17 C 0.11 1.42 5.88 -3.53 -0.02 1.40 16 18 N -0.60 -7.18 3.02 -178.00 -0.54 -7.72 16 19 C 0.66 8.47 7.75 54.06 0.42 8.89 16 20 O -0.56 -8.51 11.35 -19.28 -0.22 -8.73 16 21 O -0.36 -3.96 8.59 -40.30 -0.35 -4.31 16 22 C 0.14 1.24 1.13 -90.61 -0.10 1.13 16 23 C -0.18 -1.70 8.37 37.16 0.31 -1.39 16 24 C -0.14 -0.86 8.85 37.16 0.33 -0.54 16 25 C -0.18 -1.73 8.37 37.16 0.31 -1.42 16 26 C 0.08 0.69 6.65 -3.49 -0.02 0.67 16 27 C 0.05 0.44 6.99 37.31 0.26 0.70 16 28 O -0.35 -5.03 9.92 -55.07 -0.55 -5.58 16 29 H 0.05 1.14 8.14 -51.93 -0.42 0.72 16 30 H 0.05 1.12 3.27 -51.93 -0.17 0.95 16 31 H 0.04 0.79 8.14 -51.93 -0.42 0.36 16 32 H 0.27 7.44 8.31 -40.82 -0.34 7.11 16 33 H 0.40 6.86 8.54 -40.82 -0.35 6.51 16 34 H 0.09 1.26 8.14 -51.93 -0.42 0.84 16 35 H 0.12 1.61 7.08 -51.93 -0.37 1.25 16 36 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 37 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 38 H 0.09 1.07 5.88 -51.93 -0.31 0.77 16 39 H 0.07 0.39 8.14 -51.93 -0.42 -0.03 16 40 H 0.08 0.37 8.14 -51.93 -0.42 -0.05 16 41 H 0.07 0.39 8.14 -51.93 -0.42 -0.04 16 42 H 0.09 1.09 5.88 -51.93 -0.31 0.79 16 43 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 44 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 45 H 0.10 0.75 7.01 -51.93 -0.36 0.39 16 46 H 0.08 0.71 8.14 -51.93 -0.42 0.29 16 47 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 48 H 0.11 0.79 8.14 -51.93 -0.42 0.37 16 LS Contribution 377.71 15.07 5.69 5.69 Total: -1.00 -33.78 377.71 -6.47 -40.26 By element: Atomic # 1 Polarization: 12.98 SS G_CDS: -7.72 Total: 5.25 kcal Atomic # 6 Polarization: 8.44 SS G_CDS: 1.08 Total: 9.52 kcal Atomic # 7 Polarization: -47.23 SS G_CDS: -0.04 Total: -47.27 kcal Atomic # 8 Polarization: -29.71 SS G_CDS: -1.34 Total: -31.05 kcal Atomic # 14 Polarization: 21.74 SS G_CDS: -4.14 Total: 17.59 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -33.78 -6.47 -40.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000371979191.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.204 kcal (2) G-P(sol) polarization free energy of solvation -33.783 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -140.987 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.461 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds