Wall clock time and date at job start Tue Mar 31 2020 15:36:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09004 * 109.47305 * 2 1 4 4 N 1.46501 * 109.47263 * 119.99794 * 2 1 3 5 5 C 1.34779 * 120.00234 * 275.00250 * 4 2 1 6 6 O 1.21510 * 119.99890 * 359.97438 * 5 4 2 7 7 O 1.34635 * 120.00061 * 179.97438 * 5 4 2 8 8 C 1.45194 * 117.00107 * 179.97438 * 7 5 4 9 9 C 1.53004 * 109.46757 * 60.00499 * 8 7 5 10 10 C 1.53007 * 109.47533 * 180.02562 * 8 7 5 11 11 C 1.52995 * 109.47514 * 300.00649 * 8 7 5 12 12 C 1.53003 * 109.47398 * 240.00124 * 2 1 3 13 13 H 1.08996 * 109.51055 * 185.10479 * 12 2 1 14 14 C 1.53292 * 109.51410 * 64.99854 * 12 2 1 15 15 N 1.47147 * 108.38660 * 187.77616 * 14 12 2 16 16 C 1.34770 * 120.98468 * 230.51070 * 15 14 12 17 17 O 1.21689 * 120.00057 * 355.04876 * 16 15 14 18 18 C 1.46378 * 120.00206 * 175.04573 * 16 15 14 19 19 H 1.07994 * 119.99580 * 8.38609 * 18 16 15 20 20 C 1.40044 * 119.99739 * 188.38987 * 18 16 15 21 21 N 1.30669 * 120.00781 * 6.66126 * 20 18 16 22 22 Si 1.86806 * 119.99550 * 186.66256 * 20 18 16 23 23 H 1.48495 * 109.47101 * 265.00620 * 22 20 18 24 24 H 1.48497 * 109.47211 * 25.01213 * 22 20 18 25 25 H 1.48508 * 109.47028 * 145.01098 * 22 20 18 26 26 C 1.47152 * 118.03173 * 50.78990 * 15 14 12 27 27 C 1.53713 * 108.16093 * 309.15340 * 26 15 14 28 28 O 1.42959 * 109.50898 * 305.25598 * 12 2 1 29 29 H 1.09000 * 109.47243 * 59.99912 * 1 2 3 30 30 H 1.08991 * 109.47177 * 179.97438 * 1 2 3 31 31 H 1.09003 * 109.47373 * 300.00108 * 1 2 3 32 32 H 0.97000 * 119.99921 * 94.99813 * 4 2 1 33 33 H 1.08991 * 109.47394 * 59.99910 * 9 8 7 34 34 H 1.09003 * 109.47197 * 180.02562 * 9 8 7 35 35 H 1.09000 * 109.47110 * 299.99783 * 9 8 7 36 36 H 1.08999 * 109.46284 * 60.00150 * 10 8 7 37 37 H 1.08991 * 109.47252 * 180.02562 * 10 8 7 38 38 H 1.08999 * 109.46550 * 300.00654 * 10 8 7 39 39 H 1.08991 * 109.47475 * 59.99515 * 11 8 7 40 40 H 1.09006 * 109.47376 * 180.02562 * 11 8 7 41 41 H 1.09006 * 109.46890 * 299.99866 * 11 8 7 42 42 H 1.09000 * 109.68090 * 68.04782 * 14 12 2 43 43 H 1.09001 * 109.68235 * 307.50648 * 14 12 2 44 44 H 0.96993 * 120.00309 * 180.02562 * 21 20 18 45 45 H 1.08992 * 109.68611 * 68.93841 * 26 15 14 46 46 H 1.09003 * 109.67919 * 189.49335 * 26 15 14 47 47 H 1.09001 * 109.65966 * 292.57474 * 27 26 15 48 48 H 1.09007 * 109.48345 * 172.40211 * 27 26 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0183 -0.6906 1.1962 5 6 2.1470 -0.0182 2.3572 6 8 1.8584 1.1609 2.4116 7 8 2.5954 -0.6530 3.4566 8 6 2.7093 0.1337 4.6716 9 6 1.3350 0.6899 5.0498 10 6 3.2314 -0.7514 5.8053 11 6 3.6820 1.2917 4.4401 12 6 2.0400 -0.7212 -1.2493 13 1 3.1262 -0.8014 -1.2053 14 6 1.6350 0.0697 -2.4984 15 7 1.9698 -0.7334 -3.6850 16 6 2.6764 -0.2049 -4.7037 17 8 2.9700 0.9760 -4.6923 18 6 3.0908 -1.0513 -5.8238 19 1 2.7186 -2.0619 -5.9033 20 6 3.9699 -0.5504 -6.7920 21 7 4.5221 0.6226 -6.6291 22 14 4.3532 -1.5594 -8.3167 23 1 5.6001 -2.3351 -8.0964 24 1 3.2306 -2.4930 -8.5876 25 1 4.5335 -0.6519 -9.4784 26 6 1.5050 -2.1289 -3.7293 27 6 1.9210 -2.8143 -2.4179 28 8 1.4659 -2.0289 -1.3135 29 1 -0.3634 0.5138 -0.8900 30 1 -0.3633 -1.0276 -0.0005 31 1 -0.3634 0.5139 0.8900 32 1 2.2490 -1.6317 1.1527 33 1 0.6421 -0.1350 5.2147 34 1 1.4206 1.2809 5.9617 35 1 0.9635 1.3205 4.2421 36 1 4.2105 -1.1472 5.5355 37 1 3.3165 -0.1609 6.7174 38 1 2.5387 -1.5766 5.9703 39 1 3.3106 1.9223 3.6325 40 1 3.7679 1.8821 5.3524 41 1 4.6611 0.8955 4.1707 42 1 2.1798 1.0133 -2.5280 43 1 0.5628 0.2649 -2.4777 44 1 5.1307 0.9696 -7.2999 45 1 0.4200 -2.1514 -3.8305 46 1 1.9638 -2.6420 -4.5746 47 1 3.0067 -2.9029 -2.3788 48 1 1.4727 -3.8067 -2.3682 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000773345327.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:36:56 Heat of formation + Delta-G solvation = -161.400652 kcal Electronic energy + Delta-G solvation = -29383.943049 eV Core-core repulsion = 25246.374979 eV Total energy + Delta-G solvation = -4137.568070 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 328.188 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -40.85600 -39.50056 -37.67173 -36.74876 -35.23493 -34.20921 -33.45532 -32.56862 -31.74644 -29.07899 -27.62011 -27.55102 -27.34732 -26.04595 -24.44887 -22.94366 -21.91446 -20.38183 -20.08793 -19.18198 -18.27174 -16.86229 -16.75745 -16.26831 -15.96214 -15.87835 -15.52713 -14.94248 -14.72652 -14.53270 -14.41369 -14.21417 -14.06579 -13.60110 -13.55652 -13.06936 -12.80936 -12.69158 -12.37972 -12.29453 -12.08989 -12.06598 -11.93645 -11.76233 -11.62961 -11.48810 -11.39689 -11.25101 -11.12933 -11.01007 -10.73198 -10.49332 -10.32060 -10.29790 -10.15081 -10.07606 -9.58741 -9.17459 -8.92421 -7.70352 -7.33180 -6.32369 -4.73991 2.11741 2.84002 3.07364 3.15609 3.19005 3.81953 3.98661 4.10097 4.35155 4.45665 4.52272 4.56455 4.70877 4.88610 5.08173 5.24621 5.29296 5.32913 5.38459 5.43604 5.45901 5.47503 5.54168 5.58362 5.60059 5.67038 5.75826 5.77890 5.83733 5.85735 5.95597 6.02953 6.11219 6.15551 6.23895 6.31031 6.37373 6.43160 6.50524 6.53559 7.33949 7.37236 7.41439 7.47103 7.99408 8.21883 8.38754 8.92580 9.28977 10.46014 10.64100 Molecular weight = 328.19amu Principal moments of inertia in cm(-1) A = 0.023527 B = 0.002499 C = 0.002442 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1189.829075 B =11202.634549 C =11461.082205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.173 3.827 3 H 0.104 0.896 4 N -0.700 5.700 5 C 0.650 3.350 6 O -0.570 6.570 7 O -0.367 6.367 8 C 0.136 3.864 9 C -0.183 4.183 10 C -0.140 4.140 11 C -0.184 4.184 12 C 0.072 3.928 13 H 0.067 0.933 14 C 0.097 3.903 15 N -0.644 5.644 16 C 0.562 3.438 17 O -0.577 6.577 18 C -0.546 4.546 19 H 0.074 0.926 20 C 0.089 3.911 21 N -0.768 5.768 22 Si 0.907 3.093 23 H -0.273 1.273 24 H -0.263 1.263 25 H -0.278 1.278 26 C 0.088 3.912 27 C 0.048 3.952 28 O -0.383 6.383 29 H 0.072 0.928 30 H 0.067 0.933 31 H 0.057 0.943 32 H 0.409 0.591 33 H 0.058 0.942 34 H 0.068 0.932 35 H 0.089 0.911 36 H 0.066 0.934 37 H 0.079 0.921 38 H 0.066 0.934 39 H 0.089 0.911 40 H 0.068 0.932 41 H 0.059 0.941 42 H 0.093 0.907 43 H 0.057 0.943 44 H 0.270 0.730 45 H 0.051 0.949 46 H 0.102 0.898 47 H 0.053 0.947 48 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.391 -6.123 19.633 21.029 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.219 4.219 2 C 0.069 3.931 3 H 0.122 0.878 4 N -0.359 5.359 5 C 0.403 3.597 6 O -0.460 6.460 7 O -0.282 6.282 8 C 0.099 3.901 9 C -0.240 4.240 10 C -0.198 4.198 11 C -0.241 4.241 12 C 0.012 3.988 13 H 0.085 0.915 14 C -0.028 4.028 15 N -0.383 5.383 16 C 0.368 3.632 17 O -0.459 6.459 18 C -0.582 4.582 19 H 0.092 0.908 20 C -0.131 4.131 21 N -0.396 5.396 22 Si 0.731 3.269 23 H -0.198 1.198 24 H -0.187 1.187 25 H -0.203 1.203 26 C -0.037 4.037 27 C -0.029 4.029 28 O -0.302 6.302 29 H 0.091 0.909 30 H 0.087 0.913 31 H 0.076 0.924 32 H 0.244 0.756 33 H 0.077 0.923 34 H 0.087 0.913 35 H 0.107 0.893 36 H 0.085 0.915 37 H 0.098 0.902 38 H 0.085 0.915 39 H 0.108 0.892 40 H 0.087 0.913 41 H 0.078 0.922 42 H 0.111 0.889 43 H 0.075 0.925 44 H 0.081 0.919 45 H 0.069 0.931 46 H 0.120 0.880 47 H 0.072 0.928 48 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -4.342 -4.767 19.781 20.805 hybrid contribution 0.487 -0.937 -0.911 1.395 sum -3.855 -5.704 18.870 20.087 Atomic orbital electron populations 1.22151 0.94253 1.03065 1.02391 1.20995 0.95171 0.96443 0.80479 0.87822 1.44833 1.69355 1.14611 1.07053 1.18099 0.76679 0.83835 0.81077 1.90891 1.55453 1.14786 1.84828 1.86300 1.79608 1.43839 1.18426 1.22036 0.96387 0.90865 0.80786 1.22511 0.95810 1.02172 1.03516 1.21856 1.02029 0.99935 0.95940 1.22524 0.98945 0.98509 1.04161 1.22750 0.97451 0.84366 0.94211 0.91517 1.21752 1.00036 0.96145 0.84830 1.48296 1.59993 1.10936 1.19122 1.18287 0.76280 0.87593 0.81041 1.90596 1.59022 1.17054 1.79239 1.20919 1.29626 0.99855 1.07801 0.90845 1.25716 0.94192 0.94641 0.98561 1.69967 1.21100 1.15926 1.32626 0.86366 0.79270 0.80103 0.81119 1.19797 1.18741 1.20292 1.22180 0.98695 0.84697 0.98116 1.23110 0.99197 0.94044 0.86551 1.87810 1.68666 1.25512 1.48178 0.90887 0.91347 0.92402 0.75598 0.92265 0.91288 0.89257 0.91479 0.90242 0.91537 0.89216 0.91269 0.92169 0.88898 0.92472 0.91884 0.93054 0.88026 0.92847 0.88701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.06 9.05 37.16 0.34 -1.72 16 2 C 0.17 2.38 2.45 -67.93 -0.17 2.21 16 3 H 0.10 1.54 7.58 -51.93 -0.39 1.14 16 4 N -0.70 -9.01 5.06 -58.73 -0.30 -9.31 16 5 C 0.65 9.00 8.02 54.06 0.43 9.44 16 6 O -0.57 -8.93 11.54 -19.28 -0.22 -9.16 16 7 O -0.37 -4.56 9.94 -40.31 -0.40 -4.96 16 8 C 0.14 1.39 1.13 -90.62 -0.10 1.28 16 9 C -0.18 -1.79 8.37 37.16 0.31 -1.48 16 10 C -0.14 -1.03 8.85 37.16 0.33 -0.71 16 11 C -0.18 -1.89 8.37 37.16 0.31 -1.57 16 12 C 0.07 1.11 2.61 -26.58 -0.07 1.04 16 13 H 0.07 1.12 8.14 -51.93 -0.42 0.69 16 14 C 0.10 1.84 5.80 -3.54 -0.02 1.82 16 15 N -0.64 -14.16 3.01 -173.69 -0.52 -14.68 16 16 C 0.56 15.54 7.60 -12.99 -0.10 15.44 16 17 O -0.58 -18.27 14.63 5.20 0.08 -18.19 16 18 C -0.55 -14.76 8.85 -35.63 -0.32 -15.07 16 19 H 0.07 1.79 5.74 -52.49 -0.30 1.49 16 20 C 0.09 2.41 5.48 -17.37 -0.10 2.31 16 21 N -0.77 -22.47 11.92 55.55 0.66 -21.81 16 22 Si 0.91 19.46 29.56 -169.99 -5.03 14.44 16 23 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 24 H -0.26 -5.45 7.11 56.52 0.40 -5.04 16 25 H -0.28 -5.91 7.11 56.52 0.40 -5.50 16 26 C 0.09 1.54 6.58 -3.32 -0.02 1.52 16 27 C 0.05 0.70 7.00 37.53 0.26 0.96 16 28 O -0.38 -5.62 9.24 -35.23 -0.33 -5.94 16 29 H 0.07 0.93 6.42 -51.93 -0.33 0.59 16 30 H 0.07 0.87 7.55 -51.93 -0.39 0.48 16 31 H 0.06 0.75 8.14 -51.93 -0.42 0.32 16 32 H 0.41 4.77 8.50 -40.82 -0.35 4.42 16 33 H 0.06 0.55 8.14 -51.93 -0.42 0.12 16 34 H 0.07 0.53 8.14 -51.93 -0.42 0.11 16 35 H 0.09 1.09 5.88 -51.93 -0.31 0.79 16 36 H 0.07 0.49 8.14 -51.93 -0.42 0.06 16 37 H 0.08 0.44 8.14 -51.93 -0.42 0.01 16 38 H 0.07 0.47 8.14 -51.93 -0.42 0.04 16 39 H 0.09 1.15 5.88 -51.93 -0.31 0.84 16 40 H 0.07 0.56 8.14 -51.93 -0.42 0.14 16 41 H 0.06 0.60 8.14 -51.93 -0.42 0.18 16 42 H 0.09 1.97 7.12 -51.93 -0.37 1.60 16 43 H 0.06 1.00 6.27 -51.93 -0.33 0.68 16 44 H 0.27 7.18 8.29 -40.82 -0.34 6.84 16 45 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 46 H 0.10 1.84 5.41 -51.93 -0.28 1.55 16 47 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 48 H 0.09 1.08 8.14 -51.93 -0.42 0.66 16 LS Contribution 378.76 15.07 5.71 5.71 Total: -1.00 -33.88 378.76 -6.82 -40.70 By element: Atomic # 1 Polarization: 15.29 SS G_CDS: -7.56 Total: 7.73 kcal Atomic # 6 Polarization: 14.39 SS G_CDS: 1.09 Total: 15.48 kcal Atomic # 7 Polarization: -45.64 SS G_CDS: -0.16 Total: -45.80 kcal Atomic # 8 Polarization: -37.38 SS G_CDS: -0.87 Total: -38.25 kcal Atomic # 14 Polarization: 19.46 SS G_CDS: -5.03 Total: 14.44 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -33.88 -6.82 -40.70 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000773345327.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -120.705 kcal (2) G-P(sol) polarization free energy of solvation -33.880 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.816 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds