Wall clock time and date at job start Tue Mar 31 2020 16:21:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46498 * 109.47316 * 2 1 4 4 C 1.46495 * 120.00273 * 95.20777 * 3 2 1 5 5 C 1.50706 * 109.47080 * 83.95967 * 4 3 2 6 6 C 1.38213 * 120.00387 * 260.79661 * 5 4 3 7 7 C 1.38310 * 120.01433 * 179.76839 * 6 5 4 8 8 Br 1.89094 * 119.98687 * 180.27599 * 7 6 5 9 9 C 1.38355 * 120.02768 * 0.51253 * 7 6 5 10 10 C 1.38169 * 120.01755 * 359.73935 * 9 7 6 11 11 C 1.38439 * 120.01049 * 81.07534 * 5 4 3 12 12 F 1.35099 * 120.01351 * 359.97438 * 11 5 4 13 13 C 1.34782 * 119.99765 * 275.20335 * 3 2 1 14 14 O 1.21681 * 119.99882 * 179.97438 * 13 3 2 15 15 C 1.46375 * 119.99718 * 0.02562 * 13 3 2 16 16 H 1.07995 * 120.00321 * 359.97438 * 15 13 3 17 17 C 1.40048 * 119.99622 * 179.97438 * 15 13 3 18 18 N 1.30668 * 120.00190 * 359.97438 * 17 15 13 19 19 Si 1.86800 * 119.99942 * 179.97438 * 17 15 13 20 20 H 1.48503 * 109.47115 * 89.99999 * 19 17 15 21 21 H 1.48501 * 109.47407 * 209.99656 * 19 17 15 22 22 H 1.48497 * 109.47185 * 330.00158 * 19 17 15 23 23 H 1.09001 * 109.46956 * 55.00638 * 1 2 3 24 24 H 1.08994 * 109.47123 * 175.00970 * 1 2 3 25 25 H 1.09006 * 109.46703 * 295.00940 * 1 2 3 26 26 H 1.08995 * 109.47059 * 239.99514 * 2 1 3 27 27 H 1.09000 * 109.46900 * 119.99782 * 2 1 3 28 28 H 1.09000 * 109.47561 * 203.95472 * 4 3 2 29 29 H 1.09001 * 109.47122 * 323.95892 * 4 3 2 30 30 H 1.08003 * 119.99612 * 359.97438 * 6 5 4 31 31 H 1.08005 * 119.98818 * 179.72438 * 9 7 6 32 32 H 1.07994 * 120.00985 * 179.97438 * 10 9 7 33 33 H 0.97003 * 120.00097 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.3711 2.0334 1.2634 5 6 3.7820 1.6637 1.6428 6 6 4.0089 0.6653 2.5713 7 6 5.3037 0.3225 2.9161 8 35 5.6134 -1.0489 4.1807 9 6 6.3724 0.9858 2.3399 10 6 6.1469 1.9877 1.4154 11 6 4.8509 2.3278 1.0658 12 9 4.6296 3.3073 0.1620 13 6 2.1432 2.0518 -1.1625 14 8 2.5484 3.1992 -1.1624 15 6 1.7903 1.4002 -2.4248 16 1 1.4303 0.3820 -2.4247 17 6 1.9195 2.0972 -3.6326 18 7 2.3546 3.3293 -3.6326 19 14 1.4698 1.2655 -5.2436 20 1 0.0359 1.5094 -5.5433 21 1 2.3056 1.8214 -6.3380 22 1 1.7102 -0.1955 -5.1304 23 1 -0.3633 0.5894 -0.8419 24 1 -0.3633 -1.0237 -0.0894 25 1 -0.3633 0.4345 0.9314 26 1 1.8933 -0.5139 -0.8899 27 1 1.8933 -0.5138 0.8900 28 1 2.2978 3.1147 1.1470 29 1 1.6866 1.7049 2.0455 30 1 3.1751 0.1504 3.0252 31 1 7.3831 0.7207 2.6129 32 1 6.9811 2.5057 0.9660 33 1 2.4445 3.8119 -4.4692 RHF calculation, no. of doubly occupied orbitals= 49 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000274187758.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:21:45 Heat of formation + Delta-G solvation = -54.087852 kcal Electronic energy + Delta-G solvation = -20442.265484 eV Core-core repulsion = 17042.787169 eV Total energy + Delta-G solvation = -3399.478315 eV No. of doubly occupied orbitals = 49 Molecular weight (most abundant/longest-lived isotopes) = 329.017 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.20072 -39.14451 -37.61854 -34.42553 -32.62593 -32.24356 -31.73816 -29.43033 -28.59285 -26.91999 -25.00962 -22.68856 -22.30442 -21.29820 -19.03205 -17.17612 -16.65096 -16.09614 -15.65285 -15.45088 -15.18897 -14.49346 -14.19678 -14.14424 -13.68406 -13.06739 -12.81812 -12.68699 -12.59359 -12.26199 -12.05649 -11.52081 -11.35397 -11.21915 -11.06963 -10.92896 -10.78509 -10.55236 -10.41673 -10.32763 -10.24086 -10.02633 -8.97011 -8.84211 -8.32031 -7.53332 -7.30118 -6.17607 -4.62453 1.11261 1.25177 1.60120 3.13321 3.20781 3.23398 3.53510 4.10530 4.53237 4.57910 4.61074 4.76659 4.94536 5.17661 5.34218 5.57021 5.68724 5.75119 5.86772 5.92167 6.06941 6.10639 6.16959 6.21278 6.30188 6.37644 6.49620 6.62438 6.91363 6.97302 7.45606 7.60678 8.12536 8.33973 9.03789 9.41035 10.59042 10.78066 Molecular weight = 329.02amu Principal moments of inertia in cm(-1) A = 0.020162 B = 0.003881 C = 0.003612 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1388.403187 B = 7212.815085 C = 7750.484199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.127 3.873 3 N -0.638 5.638 4 C 0.161 3.839 5 C -0.123 4.123 6 C -0.057 4.057 7 C -0.113 4.113 8 Br -0.060 7.060 9 C -0.068 4.068 10 C -0.162 4.162 11 C 0.145 3.855 12 F -0.097 7.097 13 C 0.553 3.447 14 O -0.560 6.560 15 C -0.540 4.540 16 H 0.071 0.929 17 C 0.088 3.912 18 N -0.765 5.765 19 Si 0.902 3.098 20 H -0.272 1.272 21 H -0.280 1.280 22 H -0.265 1.265 23 H 0.068 0.932 24 H 0.049 0.951 25 H 0.043 0.957 26 H 0.074 0.926 27 H 0.048 0.952 28 H 0.091 0.909 29 H 0.066 0.934 30 H 0.136 0.864 31 H 0.135 0.865 32 H 0.140 0.860 33 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.464 -8.502 14.283 17.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C 0.003 3.997 3 N -0.375 5.375 4 C 0.037 3.963 5 C -0.127 4.127 6 C -0.077 4.077 7 C -0.193 4.193 8 Br 0.026 6.974 9 C -0.088 4.088 10 C -0.181 4.181 11 C 0.125 3.875 12 F -0.075 7.075 13 C 0.359 3.641 14 O -0.441 6.441 15 C -0.577 4.577 16 H 0.089 0.911 17 C -0.132 4.132 18 N -0.394 5.394 19 Si 0.727 3.273 20 H -0.198 1.198 21 H -0.205 1.205 22 H -0.189 1.189 23 H 0.087 0.913 24 H 0.068 0.932 25 H 0.062 0.938 26 H 0.093 0.907 27 H 0.067 0.933 28 H 0.110 0.890 29 H 0.085 0.915 30 H 0.154 0.846 31 H 0.153 0.847 32 H 0.158 0.842 33 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 5.826 -8.148 14.579 17.689 hybrid contribution -0.272 -0.146 -1.237 1.275 sum 5.553 -8.294 13.342 16.663 Atomic orbital electron populations 1.22193 0.97530 1.00715 1.02078 1.21098 0.93253 0.84471 1.00928 1.48250 1.70453 1.13589 1.05258 1.19880 0.88110 1.00242 0.88086 1.20787 0.97966 0.96881 0.97081 1.20843 0.95189 0.95610 0.96063 1.21628 0.96051 0.99758 1.01813 1.96653 1.96718 1.48472 1.55607 1.20814 0.98254 0.94507 0.95265 1.21176 0.96047 1.00259 1.00653 1.17859 0.93143 0.87913 0.88611 1.91778 1.95251 1.57658 1.62796 1.18311 0.78021 0.85683 0.82092 1.90636 1.49929 1.18063 1.85463 1.20974 1.46821 1.00237 0.89636 0.91088 1.25705 0.93021 0.94343 1.00088 1.70018 1.32924 1.09200 1.27237 0.86455 0.78920 0.80254 0.81654 1.19767 1.20518 1.18938 0.91286 0.93246 0.93828 0.90736 0.93335 0.89031 0.91537 0.84643 0.84686 0.84241 0.92197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.72 10.09 37.16 0.37 -2.34 16 2 C 0.13 2.29 5.77 -4.04 -0.02 2.27 16 3 N -0.64 -13.89 2.47 -176.73 -0.44 -14.33 16 4 C 0.16 3.04 5.35 -5.19 -0.03 3.01 16 5 C -0.12 -2.13 5.46 -104.55 -0.57 -2.70 16 6 C -0.06 -0.81 9.41 -39.56 -0.37 -1.18 16 7 C -0.11 -1.50 6.22 -39.51 -0.25 -1.75 16 8 Br -0.06 -0.67 33.70 -68.01 -2.29 -2.96 16 9 C -0.07 -0.88 9.79 -39.56 -0.39 -1.27 16 10 C -0.16 -2.42 10.03 -39.52 -0.40 -2.82 16 11 C 0.15 2.71 7.24 -39.42 -0.29 2.42 16 12 F -0.10 -2.25 14.21 2.25 0.03 -2.22 16 13 C 0.55 15.14 7.57 -12.98 -0.10 15.04 16 14 O -0.56 -17.24 12.11 5.21 0.06 -17.18 16 15 C -0.54 -14.78 8.27 -35.63 -0.29 -15.08 16 16 H 0.07 1.79 6.05 -52.49 -0.32 1.47 16 17 C 0.09 2.42 5.50 -17.37 -0.10 2.32 16 18 N -0.77 -22.59 11.83 55.55 0.66 -21.93 16 19 Si 0.90 19.97 29.56 -169.99 -5.02 14.95 16 20 H -0.27 -5.90 7.11 56.52 0.40 -5.50 16 21 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 22 H -0.27 -5.69 7.11 56.52 0.40 -5.29 16 23 H 0.07 1.31 7.70 -51.93 -0.40 0.91 16 24 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 25 H 0.04 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.07 1.44 6.40 -51.93 -0.33 1.11 16 27 H 0.05 0.74 8.03 -51.93 -0.42 0.33 16 28 H 0.09 1.96 7.02 -51.93 -0.36 1.59 16 29 H 0.07 1.03 7.99 -51.93 -0.41 0.61 16 30 H 0.14 1.66 8.04 -52.48 -0.42 1.24 16 31 H 0.14 1.39 8.06 -52.48 -0.42 0.97 16 32 H 0.14 1.81 8.06 -52.49 -0.42 1.39 16 33 H 0.27 7.22 8.29 -40.82 -0.34 6.88 16 LS Contribution 307.81 15.07 4.64 4.64 Total: -1.00 -32.31 307.81 -8.28 -40.59 By element: Atomic # 1 Polarization: 3.99 SS G_CDS: -3.49 Total: 0.50 kcal Atomic # 6 Polarization: 0.36 SS G_CDS: -2.42 Total: -2.06 kcal Atomic # 7 Polarization: -36.48 SS G_CDS: 0.22 Total: -36.26 kcal Atomic # 8 Polarization: -17.24 SS G_CDS: 0.06 Total: -17.18 kcal Atomic # 9 Polarization: -2.25 SS G_CDS: 0.03 Total: -2.22 kcal Atomic # 14 Polarization: 19.97 SS G_CDS: -5.02 Total: 14.95 kcal Atomic # 35 Polarization: -0.67 SS G_CDS: -2.29 Total: -2.96 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -32.31 -8.28 -40.59 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000274187758.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.495 kcal (2) G-P(sol) polarization free energy of solvation -32.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.278 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.593 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.088 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds