Wall clock time and date at job start Tue Mar 31 2020 15:41:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52996 * 109.47089 * 2 1 4 4 C 1.53006 * 109.46600 * 119.99634 * 2 1 3 5 5 N 1.46892 * 109.47466 * 62.90914 * 4 2 1 6 6 C 1.46901 * 111.00402 * 195.84218 * 5 4 2 7 7 C 1.50694 * 109.47090 * 66.04259 * 6 5 4 8 8 H 1.08003 * 120.00251 * 0.02562 * 7 6 5 9 9 C 1.37884 * 120.00233 * 180.02562 * 7 6 5 10 10 N 1.31510 * 119.99348 * 0.02562 * 9 7 6 11 11 Si 1.86794 * 120.00150 * 180.02562 * 9 7 6 12 12 H 1.48496 * 109.47123 * 90.00124 * 11 9 7 13 13 H 1.48504 * 109.47177 * 210.00037 * 11 9 7 14 14 H 1.48501 * 109.47183 * 329.99918 * 11 9 7 15 15 C 1.46904 * 111.00167 * 71.88474 * 5 4 2 16 16 C 1.53000 * 109.47384 * 199.56720 * 15 5 4 17 17 H 1.09000 * 109.46759 * 303.09081 * 16 15 5 18 18 O 1.42898 * 109.47231 * 63.09057 * 16 15 5 19 19 C 1.50697 * 109.47057 * 183.09243 * 16 15 5 20 20 C 1.38248 * 119.97904 * 265.00197 * 19 16 15 21 21 C 1.38188 * 120.03646 * 180.02562 * 20 19 16 22 22 C 1.38489 * 119.99990 * 359.94865 * 21 20 19 23 23 F 1.35100 * 120.01458 * 179.97438 * 22 21 20 24 24 C 1.38412 * 119.96165 * 0.02779 * 22 21 20 25 25 C 1.38329 * 119.96226 * 359.76502 * 24 22 21 26 26 Cl 1.73609 * 120.00060 * 180.25740 * 25 24 22 27 27 H 1.08999 * 109.47050 * 60.00543 * 1 2 3 28 28 H 1.08993 * 109.47280 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47512 * 300.00587 * 1 2 3 30 30 H 1.08997 * 109.47065 * 239.99336 * 2 1 3 31 31 H 1.09004 * 109.46957 * 180.02562 * 3 2 1 32 32 H 1.08998 * 109.46946 * 299.99148 * 3 2 1 33 33 H 1.08997 * 109.47709 * 59.99731 * 3 2 1 34 34 H 1.08999 * 109.47058 * 302.90557 * 4 2 1 35 35 H 1.09000 * 109.46772 * 182.91153 * 4 2 1 36 36 H 1.08997 * 109.47480 * 186.04569 * 6 5 4 37 37 H 1.09000 * 109.46421 * 306.04379 * 6 5 4 38 38 H 0.97005 * 119.99999 * 179.97438 * 10 9 7 39 39 H 1.09001 * 109.46771 * 319.57125 * 15 5 4 40 40 H 1.08999 * 109.46645 * 79.56362 * 15 5 4 41 41 H 0.96705 * 114.00077 * 53.59401 * 18 16 15 42 42 H 1.07994 * 119.98426 * 359.97338 * 20 19 16 43 43 H 1.08000 * 119.99758 * 179.97438 * 21 20 19 44 44 H 1.08004 * 120.01420 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 1.2494 5 7 1.6085 -2.1249 1.2149 6 6 1.7429 -2.7498 2.5376 7 6 0.7801 -2.1023 3.4992 8 1 0.1327 -1.3065 3.1615 9 6 0.7257 -2.5258 4.8102 10 7 1.5143 -3.4944 5.2215 11 14 -0.4683 -1.7237 6.0020 12 1 -1.7615 -2.4529 5.9730 13 1 0.0959 -1.7709 7.3749 14 1 -0.6884 -0.3096 5.6057 15 6 2.3529 -2.8797 0.1979 16 6 1.5833 -4.1536 -0.1568 17 1 1.4168 -4.7408 0.7463 18 8 0.3249 -3.8040 -0.7366 19 6 2.3828 -4.9651 -1.1433 20 6 2.1424 -4.8371 -2.4987 21 6 2.8744 -5.5811 -3.4044 22 6 3.8502 -6.4548 -2.9545 23 9 4.5657 -7.1827 -3.8396 24 6 4.0912 -6.5826 -1.5975 25 6 3.3604 -5.8339 -0.6925 26 17 3.6665 -5.9884 1.0094 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 1.8933 -0.5139 -0.8899 31 1 3.1300 1.4424 -0.0005 32 1 1.6768 1.9562 -0.8901 33 1 1.6767 1.9564 0.8899 34 1 1.6346 -0.2383 2.1385 35 1 3.1286 -0.6762 1.2759 36 1 1.5197 -3.8139 2.4612 37 1 2.7624 -2.6175 2.8998 38 1 1.4764 -3.7922 6.1440 39 1 2.4717 -2.2663 -0.6952 40 1 3.3349 -3.1455 0.5894 41 1 0.3925 -3.1992 -1.4882 42 1 1.3815 -4.1559 -2.8499 43 1 2.6858 -5.4809 -4.4630 44 1 4.8517 -7.2640 -1.2457 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000774581683.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:41:36 Heat of formation + Delta-G solvation = -85.239268 kcal Electronic energy + Delta-G solvation = -26607.740157 eV Core-core repulsion = 22693.004890 eV Total energy + Delta-G solvation = -3914.735267 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 329.130 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -49.14136 -39.85746 -37.82440 -36.49948 -36.12792 -33.97282 -32.38920 -31.31544 -31.14474 -28.13248 -26.91240 -26.64705 -24.54348 -23.38609 -23.13517 -21.44795 -20.50008 -19.23699 -18.16088 -16.99727 -16.83374 -16.33341 -15.86307 -15.66876 -15.07475 -14.83344 -14.57584 -14.41863 -14.10242 -14.04472 -13.79750 -13.42424 -13.31521 -12.92740 -12.76330 -12.34039 -11.97190 -11.83379 -11.79988 -11.58676 -11.43043 -11.30807 -11.20325 -11.06854 -10.77066 -10.73804 -10.63181 -10.47971 -10.28170 -9.98446 -9.85440 -9.63247 -9.19114 -9.13064 -8.66992 -8.39830 -7.20318 -5.99864 -3.99996 0.78410 0.86439 2.03317 3.20480 3.34163 3.40284 3.43175 3.99627 4.36767 4.46146 4.48878 4.59951 4.68010 5.02111 5.10382 5.24527 5.28991 5.36211 5.37809 5.44847 5.55627 5.61912 5.69198 5.76262 5.89752 5.90991 5.92847 6.01448 6.12694 6.16140 6.28740 6.40239 6.44256 6.49595 6.52260 6.58505 6.88471 6.97144 7.30072 7.36183 7.81123 7.91713 8.11065 8.22285 8.56456 9.07490 9.63745 11.11020 Molecular weight = 329.13amu Principal moments of inertia in cm(-1) A = 0.012151 B = 0.004063 C = 0.003311 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2303.877656 B = 6889.514616 C = 8453.808056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.091 4.091 3 C -0.145 4.145 4 C 0.067 3.933 5 N -0.521 5.521 6 C 0.195 3.805 7 C -0.503 4.503 8 H 0.064 0.936 9 C 0.056 3.944 10 N -0.898 5.898 11 Si 0.894 3.106 12 H -0.280 1.280 13 H -0.289 1.289 14 H -0.274 1.274 15 C 0.029 3.971 16 C 0.151 3.849 17 H 0.122 0.878 18 O -0.532 6.532 19 C -0.108 4.108 20 C -0.071 4.071 21 C -0.148 4.148 22 C 0.103 3.897 23 F -0.137 7.137 24 C -0.146 4.146 25 C -0.007 4.007 26 Cl -0.033 7.033 27 H 0.034 0.966 28 H 0.075 0.925 29 H 0.049 0.951 30 H 0.057 0.943 31 H 0.047 0.953 32 H 0.048 0.952 33 H 0.054 0.946 34 H 0.087 0.913 35 H 0.015 0.985 36 H 0.032 0.968 37 H -0.012 1.012 38 H 0.260 0.740 39 H 0.065 0.935 40 H 0.037 0.963 41 H 0.363 0.637 42 H 0.143 0.857 43 H 0.140 0.860 44 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.344 -1.223 -17.102 17.688 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.192 4.192 2 C -0.110 4.110 3 C -0.203 4.203 4 C -0.062 4.062 5 N -0.245 5.245 6 C 0.070 3.930 7 C -0.541 4.541 8 H 0.082 0.918 9 C -0.145 4.145 10 N -0.538 5.538 11 Si 0.723 3.277 12 H -0.207 1.207 13 H -0.215 1.215 14 H -0.199 1.199 15 C -0.100 4.100 16 C 0.091 3.909 17 H 0.140 0.860 18 O -0.335 6.335 19 C -0.110 4.110 20 C -0.090 4.090 21 C -0.167 4.167 22 C 0.083 3.917 23 F -0.115 7.115 24 C -0.166 4.166 25 C -0.034 4.034 26 Cl -0.004 7.004 27 H 0.053 0.947 28 H 0.094 0.906 29 H 0.068 0.932 30 H 0.075 0.925 31 H 0.066 0.934 32 H 0.067 0.933 33 H 0.073 0.927 34 H 0.106 0.894 35 H 0.033 0.967 36 H 0.050 0.950 37 H 0.006 0.994 38 H 0.070 0.930 39 H 0.083 0.917 40 H 0.055 0.945 41 H 0.209 0.791 42 H 0.160 0.840 43 H 0.158 0.842 44 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 3.724 -1.771 -16.447 16.955 hybrid contribution 0.855 0.426 0.534 1.094 sum 4.578 -1.344 -15.913 16.613 Atomic orbital electron populations 1.21682 0.94588 1.03116 0.99783 1.21136 0.96890 0.94722 0.98264 1.21818 1.00339 0.96862 1.01319 1.22067 0.96025 0.89883 0.98191 1.62006 1.53730 1.00789 1.07950 1.19740 0.95333 0.95111 0.82842 1.21142 1.20407 1.19093 0.93503 0.91793 1.24957 0.95978 0.95258 0.98308 1.69955 1.38678 1.28258 1.16911 0.86555 0.81245 0.79776 0.80167 1.20662 1.21470 1.19909 1.22675 0.95535 0.94492 0.97286 1.20951 0.82711 0.93959 0.93265 0.86027 1.86729 1.28352 1.67851 1.50578 1.20822 0.96549 0.97636 0.95966 1.20748 0.98563 0.98537 0.91116 1.21186 0.96598 0.97586 1.01339 1.17446 0.93696 0.94194 0.86365 1.91512 1.76636 1.75701 1.67665 1.20962 1.02381 1.02222 0.90993 1.20575 0.97641 0.98273 0.86924 1.98465 1.94659 1.96855 1.10431 0.94726 0.90615 0.93220 0.92500 0.93398 0.93292 0.92665 0.89423 0.96668 0.95027 0.99418 0.93046 0.91694 0.94479 0.79115 0.83969 0.84178 0.83706 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -1.99 9.06 37.16 0.34 -1.65 16 2 C -0.09 -1.32 2.92 -90.62 -0.26 -1.59 16 3 C -0.15 -1.84 9.19 37.16 0.34 -1.50 16 4 C 0.07 1.22 4.21 -3.83 -0.02 1.20 16 5 N -0.52 -10.31 3.67 -236.08 -0.87 -11.18 16 6 C 0.19 4.85 4.55 -4.98 -0.02 4.82 16 7 C -0.50 -13.73 8.28 -34.44 -0.29 -14.01 16 8 H 0.06 1.74 7.25 -52.48 -0.38 1.35 16 9 C 0.06 1.57 5.46 -17.82 -0.10 1.47 16 10 N -0.90 -26.37 13.29 55.43 0.74 -25.64 16 11 Si 0.89 21.58 29.54 -169.99 -5.02 16.56 16 12 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 13 H -0.29 -6.93 7.11 56.52 0.40 -6.53 16 14 H -0.27 -6.47 7.11 56.52 0.40 -6.07 16 15 C 0.03 0.48 4.40 -3.82 -0.02 0.47 16 16 C 0.15 2.38 2.79 -27.88 -0.08 2.30 16 17 H 0.12 2.33 5.69 -51.93 -0.30 2.03 16 18 O -0.53 -8.08 12.78 -35.23 -0.45 -8.53 16 19 C -0.11 -1.42 5.07 -104.58 -0.53 -1.95 16 20 C -0.07 -0.74 9.31 -39.60 -0.37 -1.11 16 21 C -0.15 -1.44 10.03 -39.51 -0.40 -1.84 16 22 C 0.10 1.14 7.30 -39.42 -0.29 0.85 16 23 F -0.14 -1.53 17.27 2.25 0.04 -1.49 16 24 C -0.15 -1.71 9.81 -39.48 -0.39 -2.10 16 25 C -0.01 -0.09 6.31 -39.51 -0.25 -0.34 16 26 Cl -0.03 -0.51 27.15 -51.86 -1.41 -1.92 16 27 H 0.03 0.43 8.14 -51.93 -0.42 0.01 16 28 H 0.07 1.25 7.69 -51.93 -0.40 0.85 16 29 H 0.05 0.79 8.14 -51.93 -0.42 0.37 16 30 H 0.06 0.77 6.46 -51.93 -0.34 0.43 16 31 H 0.05 0.58 8.14 -51.93 -0.42 0.15 16 32 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 33 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 34 H 0.09 1.82 6.59 -51.93 -0.34 1.48 16 35 H 0.02 0.28 8.05 -51.93 -0.42 -0.14 16 36 H 0.03 0.85 6.58 -51.93 -0.34 0.51 16 37 H -0.01 -0.33 8.12 -51.93 -0.42 -0.75 16 38 H 0.26 7.28 8.31 -40.82 -0.34 6.94 16 39 H 0.06 0.92 6.21 -51.93 -0.32 0.60 16 40 H 0.04 0.65 7.74 -51.93 -0.40 0.25 16 41 H 0.36 3.99 7.61 45.56 0.35 4.34 16 42 H 0.14 1.13 6.56 -52.49 -0.34 0.78 16 43 H 0.14 1.01 8.06 -52.49 -0.42 0.59 16 44 H 0.15 1.48 8.06 -52.48 -0.42 1.05 16 LS Contribution 373.40 15.07 5.63 5.63 Total: -1.00 -29.83 373.40 -9.41 -39.25 By element: Atomic # 1 Polarization: 8.06 SS G_CDS: -5.75 Total: 2.31 kcal Atomic # 6 Polarization: -12.67 SS G_CDS: -2.32 Total: -14.99 kcal Atomic # 7 Polarization: -36.68 SS G_CDS: -0.13 Total: -36.81 kcal Atomic # 8 Polarization: -8.08 SS G_CDS: -0.45 Total: -8.53 kcal Atomic # 9 Polarization: -1.53 SS G_CDS: 0.04 Total: -1.49 kcal Atomic # 14 Polarization: 21.58 SS G_CDS: -5.02 Total: 16.56 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.41 Total: -1.92 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -29.83 -9.41 -39.25 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000774581683.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.990 kcal (2) G-P(sol) polarization free energy of solvation -29.834 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.824 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.249 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.64 seconds