Wall clock time and date at job start Tue Mar 31 2020 15:20:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13597 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 C 1.52995 * 109.47293 * 315.03091 * 3 2 1 5 5 N 1.46905 * 109.47327 * 179.59613 * 4 3 2 6 6 C 1.46899 * 110.99810 * 298.09184 * 5 4 3 7 7 C 1.50696 * 109.47114 * 292.93876 * 6 5 4 8 8 H 1.08003 * 119.99948 * 354.96303 * 7 6 5 9 9 C 1.37882 * 120.00141 * 174.95975 * 7 6 5 10 10 N 1.31516 * 119.99488 * 0.02562 * 9 7 6 11 11 Si 1.86796 * 120.00082 * 180.02562 * 9 7 6 12 12 H 1.48497 * 109.47409 * 90.00106 * 11 9 7 13 13 H 1.48498 * 109.47068 * 210.00005 * 11 9 7 14 14 H 1.48500 * 109.47075 * 330.00163 * 11 9 7 15 15 C 1.46900 * 110.99878 * 62.04430 * 5 4 3 16 16 C 1.50698 * 109.47163 * 66.04488 * 15 5 4 17 17 N 1.30976 * 126.43441 * 89.71290 * 16 15 5 18 18 C 1.35234 * 105.57867 * 179.91733 * 17 16 15 19 19 C 1.48364 * 126.41324 * 180.10999 * 18 17 16 20 20 C 1.39340 * 120.13711 * 359.97438 * 19 18 17 21 21 C 1.37985 * 119.90065 * 179.76746 * 20 19 18 22 22 C 1.38367 * 120.18167 * 0.51939 * 21 20 19 23 23 C 1.38228 * 120.27244 * 359.74012 * 22 21 20 24 24 C 1.38312 * 120.09339 * 0.02562 * 23 22 21 25 25 F 1.35098 * 120.09078 * 179.97438 * 24 23 22 26 26 N 1.30781 * 107.16621 * 0.34561 * 18 17 16 27 27 O 1.21290 * 110.09666 * 359.78453 * 26 18 17 28 28 H 1.09002 * 109.47306 * 195.03011 * 3 2 1 29 29 H 1.09004 * 109.47517 * 75.03618 * 3 2 1 30 30 H 1.08997 * 109.47505 * 59.59891 * 4 3 2 31 31 H 1.09001 * 109.47437 * 299.59645 * 4 3 2 32 32 H 1.08998 * 109.47406 * 52.94370 * 6 5 4 33 33 H 1.09001 * 109.47088 * 172.94172 * 6 5 4 34 34 H 0.97000 * 119.99576 * 180.02562 * 10 9 7 35 35 H 1.09001 * 109.47442 * 186.05074 * 15 5 4 36 36 H 1.09006 * 109.47373 * 306.04651 * 15 5 4 37 37 H 1.07998 * 120.05083 * 0.02562 * 20 19 18 38 38 H 1.08000 * 119.90812 * 180.25332 * 21 20 19 39 39 H 1.07999 * 119.87014 * 179.76043 * 22 21 20 40 40 H 1.08001 * 119.95821 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1185 -1.0196 1.0194 5 7 4.5875 -1.0259 1.0125 6 6 5.1060 -1.4293 -0.3014 7 6 4.7617 -2.8743 -0.5551 8 1 4.2849 -3.4595 0.2173 9 6 5.0553 -3.4493 -1.7735 10 7 5.6363 -2.7368 -2.7138 11 14 4.6278 -5.2403 -2.0883 12 1 3.2586 -5.3300 -2.6560 13 1 5.6008 -5.8200 -3.0487 14 1 4.6842 -5.9946 -0.8104 15 6 5.1213 0.2838 1.4096 16 6 4.7707 0.5534 2.8502 17 7 5.4857 0.2292 3.8986 18 6 4.7832 0.6686 4.9674 19 6 5.1764 0.5419 6.3923 20 6 6.3750 -0.0808 6.7346 21 6 6.7382 -0.1917 8.0612 22 6 5.9103 0.3040 9.0529 23 6 4.7171 0.9183 8.7219 24 6 4.3442 1.0399 7.3956 25 9 3.1777 1.6398 7.0722 26 7 3.6899 1.2216 4.5098 27 8 3.6687 1.1630 3.2985 28 1 2.9709 0.9933 0.2665 29 1 2.9715 -0.2645 -0.9928 30 1 2.7498 -2.0112 0.7570 31 1 2.7610 -0.7504 2.0133 32 1 4.6571 -0.8074 -1.0758 33 1 6.1888 -1.3055 -0.3183 34 1 5.8425 -3.1412 -3.5711 35 1 6.2051 0.2850 1.2931 36 1 4.6873 1.0596 0.7788 37 1 7.0208 -0.4723 5.9626 38 1 7.6691 -0.6707 8.3264 39 1 6.1977 0.2110 10.0898 40 1 4.0749 1.3038 9.5001 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000189137607.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:20:55 Heat of formation + Delta-G solvation = 88.914426 kcal Electronic energy + Delta-G solvation = -26923.440162 eV Core-core repulsion = 22849.723361 eV Total energy + Delta-G solvation = -4073.716801 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 330.123 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -49.08891 -45.46131 -39.26496 -38.17417 -36.09395 -35.76152 -33.34272 -32.61365 -31.23974 -30.77622 -30.39256 -28.16957 -25.88087 -24.99896 -24.04133 -23.16486 -22.62602 -21.35375 -20.15797 -18.16992 -18.04921 -17.61319 -17.29577 -16.59119 -16.37766 -16.09965 -15.81985 -15.43522 -15.04315 -14.76864 -14.52191 -14.25571 -14.03524 -13.76224 -13.56355 -13.38890 -12.94548 -12.75580 -12.41318 -12.22897 -12.14475 -12.05708 -11.83750 -11.69781 -11.55288 -11.47608 -11.27039 -10.98555 -10.86455 -10.75011 -10.43299 -10.32748 -10.02342 -9.45806 -9.24296 -8.88663 -8.58717 -7.71454 -6.18374 -4.20259 0.37968 0.84512 1.34190 2.36792 2.87816 3.05530 3.09455 3.25628 3.32952 3.33299 3.36894 3.37712 3.82713 3.96621 4.20482 4.34015 4.44451 4.54473 4.72438 4.85130 4.87707 5.07454 5.18516 5.20375 5.31622 5.34689 5.48000 5.53955 5.63440 5.70596 5.74548 5.83576 5.91543 5.98361 6.07272 6.10974 6.43439 6.46785 6.88317 7.00042 7.52720 7.65752 7.87454 7.88687 8.19271 8.22760 8.86841 9.45507 10.91799 Molecular weight = 330.12amu Principal moments of inertia in cm(-1) A = 0.013613 B = 0.002982 C = 0.002631 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2056.328705 B = 9386.748009 C =10640.423897 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.456 5.456 2 C 0.224 3.776 3 C -0.073 4.073 4 C 0.065 3.935 5 N -0.519 5.519 6 C 0.188 3.812 7 C -0.513 4.513 8 H 0.066 0.934 9 C 0.061 3.939 10 N -0.895 5.895 11 Si 0.896 3.104 12 H -0.281 1.281 13 H -0.286 1.286 14 H -0.272 1.272 15 C 0.133 3.867 16 C 0.209 3.791 17 N -0.459 5.459 18 C 0.198 3.802 19 C -0.050 4.050 20 C -0.046 4.046 21 C -0.134 4.134 22 C -0.076 4.076 23 C -0.160 4.160 24 C 0.130 3.870 25 F -0.122 7.122 26 N -0.368 5.368 27 O 0.080 5.920 28 H 0.101 0.899 29 H 0.127 0.873 30 H 0.101 0.899 31 H 0.060 0.940 32 H 0.013 0.987 33 H 0.038 0.962 34 H 0.263 0.737 35 H 0.122 0.878 36 H 0.073 0.927 37 H 0.148 0.852 38 H 0.138 0.862 39 H 0.137 0.863 40 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.794 8.755 18.097 20.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.133 5.133 2 C -0.094 4.094 3 C -0.115 4.115 4 C -0.065 4.065 5 N -0.244 5.244 6 C 0.065 3.935 7 C -0.551 4.551 8 H 0.084 0.916 9 C -0.141 4.141 10 N -0.534 5.534 11 Si 0.724 3.276 12 H -0.207 1.207 13 H -0.212 1.212 14 H -0.197 1.197 15 C 0.003 3.997 16 C -0.013 4.013 17 N -0.192 5.192 18 C -0.072 4.072 19 C -0.053 4.053 20 C -0.066 4.066 21 C -0.152 4.152 22 C -0.095 4.095 23 C -0.179 4.179 24 C 0.108 3.892 25 F -0.100 7.100 26 N -0.074 5.074 27 O 0.018 5.982 28 H 0.119 0.881 29 H 0.145 0.855 30 H 0.120 0.880 31 H 0.078 0.922 32 H 0.031 0.969 33 H 0.056 0.944 34 H 0.073 0.927 35 H 0.140 0.860 36 H 0.091 0.909 37 H 0.166 0.834 38 H 0.156 0.844 39 H 0.155 0.845 40 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 2.030 8.594 18.940 20.897 hybrid contribution -0.268 -0.313 -1.100 1.175 sum 1.762 8.281 17.840 19.747 Atomic orbital electron populations 1.81150 1.13146 1.09414 1.09635 1.29113 0.95152 0.92607 0.92524 1.20196 0.82020 1.03184 1.06110 1.22152 0.88437 0.99832 0.96046 1.62464 1.05632 1.21563 1.34719 1.19951 0.96003 0.96653 0.80919 1.21057 1.40026 0.95240 0.98814 0.91613 1.24924 0.95058 0.98205 0.95949 1.69922 1.41763 1.36513 1.05185 0.86520 0.78143 0.84743 0.78232 1.20680 1.21210 1.19695 1.20785 1.03144 0.94332 0.81463 1.28992 0.82205 0.90607 0.99466 1.71985 1.29453 1.21265 0.96526 1.23619 0.89301 0.98881 0.95401 1.17430 0.97028 1.04914 0.85897 1.21223 0.93708 0.94294 0.97397 1.21209 1.00789 1.01155 0.92053 1.21185 0.92786 0.95243 1.00247 1.21094 0.99199 1.03591 0.93999 1.17714 0.82730 0.95843 0.92878 1.91580 1.44654 1.80372 1.93421 1.75020 1.20320 1.21067 0.90981 1.85310 1.39504 1.57670 1.15670 0.88141 0.85501 0.88048 0.92199 0.96944 0.94431 0.92689 0.85973 0.90909 0.83395 0.84418 0.84524 0.84108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.46 -8.25 18.54 42.15 0.78 -7.47 16 2 C 0.22 3.53 15.43 -20.76 -0.32 3.21 16 3 C -0.07 -1.01 5.05 -29.52 -0.15 -1.15 16 4 C 0.07 1.03 4.94 -3.82 -0.02 1.01 16 5 N -0.52 -8.83 4.69 -237.52 -1.11 -9.94 16 6 C 0.19 3.89 4.53 -4.98 -0.02 3.86 16 7 C -0.51 -12.45 8.40 -34.44 -0.29 -12.74 16 8 H 0.07 1.62 7.38 -52.48 -0.39 1.24 16 9 C 0.06 1.55 5.46 -17.82 -0.10 1.45 16 10 N -0.89 -23.72 13.29 55.43 0.74 -22.98 16 11 Si 0.90 20.15 29.54 -169.99 -5.02 15.13 16 12 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 13 H -0.29 -6.46 7.11 56.52 0.40 -6.06 16 14 H -0.27 -6.11 7.11 56.52 0.40 -5.71 16 15 C 0.13 1.79 5.38 -4.98 -0.03 1.76 16 16 C 0.21 3.06 7.06 -12.99 -0.09 2.97 16 17 N -0.46 -7.22 11.26 -9.88 -0.11 -7.33 16 18 C 0.20 3.08 7.79 -156.11 -1.22 1.87 16 19 C -0.05 -0.66 5.88 -104.83 -0.62 -1.27 16 20 C -0.05 -0.49 9.70 -39.26 -0.38 -0.87 16 21 C -0.13 -1.02 10.03 -39.63 -0.40 -1.42 16 22 C -0.08 -0.52 10.04 -39.54 -0.40 -0.92 16 23 C -0.16 -1.40 10.02 -39.56 -0.40 -1.79 16 24 C 0.13 1.59 7.28 -39.07 -0.28 1.30 16 25 F -0.12 -1.73 15.82 2.25 0.04 -1.70 16 26 N -0.37 -6.04 10.87 30.97 0.34 -5.70 16 27 O 0.08 1.22 10.65 18.02 0.19 1.41 16 28 H 0.10 1.09 6.34 -51.93 -0.33 0.77 16 29 H 0.13 1.87 6.28 -51.93 -0.33 1.54 16 30 H 0.10 1.80 6.98 -51.93 -0.36 1.43 16 31 H 0.06 0.92 6.72 -51.93 -0.35 0.57 16 32 H 0.01 0.27 6.01 -51.93 -0.31 -0.05 16 33 H 0.04 0.83 7.91 -51.93 -0.41 0.42 16 34 H 0.26 6.73 8.31 -40.82 -0.34 6.39 16 35 H 0.12 1.56 7.92 -51.93 -0.41 1.15 16 36 H 0.07 0.79 6.07 -51.93 -0.32 0.47 16 37 H 0.15 1.52 7.88 -52.49 -0.41 1.11 16 38 H 0.14 0.68 8.06 -52.49 -0.42 0.26 16 39 H 0.14 0.52 8.06 -52.49 -0.42 0.10 16 40 H 0.14 0.92 8.06 -52.49 -0.42 0.49 16 LS Contribution 354.91 15.07 5.35 5.35 Total: -1.00 -30.21 354.91 -7.54 -37.75 By element: Atomic # 1 Polarization: 2.22 SS G_CDS: -4.02 Total: -1.80 kcal Atomic # 6 Polarization: 1.98 SS G_CDS: -4.70 Total: -2.73 kcal Atomic # 7 Polarization: -54.05 SS G_CDS: 0.63 Total: -53.42 kcal Atomic # 8 Polarization: 1.22 SS G_CDS: 0.19 Total: 1.41 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.04 Total: -1.70 kcal Atomic # 14 Polarization: 20.15 SS G_CDS: -5.02 Total: 15.13 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -30.21 -7.54 -37.75 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000189137607.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 126.665 kcal (2) G-P(sol) polarization free energy of solvation -30.212 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.539 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.751 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.914 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds