Wall clock time and date at job start Tue Mar 31 2020 15:48:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09003 * 109.46949 * 2 1 4 4 C 1.50694 * 109.47174 * 120.00530 * 2 1 3 5 5 H 1.08000 * 120.00563 * 119.99919 * 4 2 1 6 6 C 1.37885 * 119.99902 * 300.00082 * 4 2 1 7 7 N 1.31516 * 119.99913 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 119.99766 * 179.97438 * 6 4 2 9 9 H 1.48506 * 109.46985 * 179.97438 * 8 6 4 10 10 H 1.48494 * 109.47276 * 299.99832 * 8 6 4 11 11 H 1.48498 * 109.47150 * 60.00043 * 8 6 4 12 12 N 1.46497 * 109.47145 * 240.00568 * 2 1 3 13 13 C 1.34777 * 120.00015 * 84.99707 * 12 2 1 14 14 O 1.21282 * 120.00331 * 0.02562 * 13 12 2 15 15 C 1.50709 * 119.99692 * 180.02562 * 13 12 2 16 16 F 1.39893 * 110.88430 * 307.57291 * 15 13 12 17 17 C 1.55158 * 111.00155 * 183.65205 * 15 13 12 18 18 C 1.54318 * 102.94323 * 206.42318 * 17 15 13 19 19 N 1.47025 * 107.27237 * 22.19371 * 18 17 15 20 20 C 1.34777 * 125.65144 * 181.09820 * 19 18 17 21 21 O 1.21504 * 120.00021 * 179.97438 * 20 19 18 22 22 O 1.34631 * 119.99902 * 359.95313 * 20 19 18 23 23 C 1.45200 * 117.00174 * 180.02562 * 22 20 19 24 24 C 1.53005 * 109.46690 * 60.00301 * 23 22 20 25 25 C 1.52999 * 109.47163 * 179.97438 * 23 22 20 26 26 C 1.52997 * 109.47030 * 300.00654 * 23 22 20 27 27 C 1.47432 * 108.70078 * 1.05949 * 19 18 17 28 28 H 1.08997 * 109.47359 * 300.00009 * 1 2 3 29 29 H 1.09007 * 109.47356 * 59.99532 * 1 2 3 30 30 H 1.09000 * 109.47156 * 179.97438 * 1 2 3 31 31 H 0.97001 * 119.99646 * 179.97438 * 7 6 4 32 32 H 0.97005 * 119.99880 * 265.00058 * 12 2 1 33 33 H 1.08998 * 110.71829 * 324.78753 * 17 15 13 34 34 H 1.09004 * 110.71830 * 88.05846 * 17 15 13 35 35 H 1.09005 * 109.88101 * 262.77936 * 18 17 15 36 36 H 1.08998 * 110.01243 * 141.68327 * 18 17 15 37 37 H 1.08996 * 109.47054 * 60.00056 * 24 23 22 38 38 H 1.08998 * 109.47332 * 180.02562 * 24 23 22 39 39 H 1.08998 * 109.46984 * 299.99834 * 24 23 22 40 40 H 1.09002 * 109.46894 * 60.00762 * 25 23 22 41 41 H 1.09000 * 109.46582 * 180.02562 * 25 23 22 42 42 H 1.08996 * 109.47451 * 300.00476 * 25 23 22 43 43 H 1.08998 * 109.47661 * 59.99543 * 26 23 22 44 44 H 1.09005 * 109.46639 * 179.97438 * 26 23 22 45 45 H 1.08997 * 109.46878 * 299.99397 * 26 23 22 46 46 H 1.08999 * 110.36306 * 217.03385 * 27 19 18 47 47 H 1.08998 * 110.36569 * 94.70716 * 27 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7105 1.2303 5 1 2.6532 -1.5886 1.1313 6 6 1.6992 -0.2395 2.4827 7 7 0.9435 0.8301 2.6034 8 14 2.3213 -1.1207 4.0078 9 1 1.8269 -0.4203 5.2204 10 1 1.8258 -2.5205 4.0075 11 1 3.8063 -1.1213 4.0080 12 7 2.0183 -0.6905 -1.1962 13 6 2.1470 -0.0180 -2.3571 14 8 1.8590 1.1588 -2.4114 15 6 2.6488 -0.7286 -3.5878 16 9 3.8533 -1.3899 -3.3255 17 6 2.8021 0.2577 -4.7757 18 6 2.6347 -0.6563 -6.0077 19 7 1.9002 -1.8516 -5.5679 20 6 1.5716 -2.9021 -6.3457 21 8 0.9609 -3.8403 -5.8732 22 8 1.9195 -2.9117 -7.6462 23 6 1.5321 -4.0752 -8.4237 24 6 0.0088 -4.2170 -8.4047 25 6 2.0100 -3.9061 -9.8673 26 6 2.1686 -5.3280 -7.8185 27 6 1.5835 -1.7111 -4.1349 28 1 -0.3634 0.5138 0.8899 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 0.7089 1.1611 3.4845 32 1 2.2490 -1.6317 -1.1527 33 1 2.0206 1.0171 -4.7498 34 1 3.7898 0.7189 -4.7690 35 1 3.6135 -0.9433 -6.3922 36 1 2.0696 -0.1382 -6.7825 37 1 -0.4446 -3.3245 -8.8358 38 1 -0.2821 -5.0907 -8.9879 39 1 -0.3321 -4.3373 -7.3764 40 1 3.0953 -3.8048 -9.8812 41 1 1.7188 -4.7794 -10.4510 42 1 1.5563 -3.0137 -10.2981 43 1 1.8277 -5.4482 -6.7902 44 1 1.8774 -6.2014 -8.4020 45 1 3.2538 -5.2269 -7.8321 46 1 1.6630 -2.6752 -3.6326 47 1 0.5836 -1.2966 -4.0062 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000175475484.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:48:36 Heat of formation + Delta-G solvation = -163.711427 kcal Electronic energy + Delta-G solvation = -29584.973876 eV Core-core repulsion = 25296.533820 eV Total energy + Delta-G solvation = -4288.440056 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.179 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -47.84925 -40.97069 -39.38125 -38.11952 -36.49415 -34.98748 -34.27618 -32.52047 -31.45205 -29.84430 -28.56701 -27.68883 -27.62651 -25.32747 -24.93967 -22.78860 -21.83373 -20.74724 -19.64346 -19.54304 -18.34617 -17.95275 -16.80854 -16.56542 -16.21058 -15.78607 -15.61149 -15.22555 -15.00577 -14.87873 -14.53612 -14.18534 -14.01103 -13.80163 -13.49769 -13.22456 -13.01973 -12.80489 -12.75412 -12.48048 -12.41782 -12.16655 -12.15932 -11.94745 -11.76424 -11.66243 -11.56047 -11.52183 -11.21660 -11.02943 -10.96732 -10.83047 -10.60198 -10.39749 -10.28202 -10.23354 -9.28534 -9.13690 -8.98150 -8.61855 -8.11425 -6.17197 -4.26811 1.78603 2.64909 2.89108 3.24660 3.29640 3.30944 3.49320 3.69080 3.97355 4.06370 4.31222 4.43945 4.48300 4.59880 4.62687 4.80656 4.96795 5.11092 5.15707 5.18186 5.21121 5.26187 5.36365 5.40849 5.44868 5.49536 5.59416 5.61069 5.67437 5.72158 5.82865 5.98581 6.04205 6.09263 6.23726 6.72877 6.84933 7.03848 7.21314 7.25099 7.41010 7.61731 7.81029 8.06246 8.12861 8.43618 8.62834 8.86502 9.40287 10.88748 Molecular weight = 330.18amu Principal moments of inertia in cm(-1) A = 0.021963 B = 0.002594 C = 0.002496 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1274.545316 B =10790.447298 C =11215.773252 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.263 3.737 3 H 0.052 0.948 4 C -0.537 4.537 5 H 0.062 0.938 6 C 0.068 3.932 7 N -0.883 5.883 8 Si 0.903 3.097 9 H -0.285 1.285 10 H -0.275 1.275 11 H -0.276 1.276 12 N -0.691 5.691 13 C 0.500 3.500 14 O -0.531 6.531 15 C 0.086 3.914 16 F -0.182 7.182 17 C -0.134 4.134 18 C 0.105 3.895 19 N -0.603 5.603 20 C 0.672 3.328 21 O -0.563 6.563 22 O -0.360 6.360 23 C 0.135 3.865 24 C -0.184 4.184 25 C -0.140 4.140 26 C -0.184 4.184 27 C 0.115 3.885 28 H 0.093 0.907 29 H 0.015 0.985 30 H 0.029 0.971 31 H 0.266 0.734 32 H 0.394 0.606 33 H 0.113 0.887 34 H 0.102 0.898 35 H 0.076 0.924 36 H 0.080 0.920 37 H 0.059 0.941 38 H 0.070 0.930 39 H 0.088 0.912 40 H 0.066 0.934 41 H 0.080 0.920 42 H 0.066 0.934 43 H 0.088 0.912 44 H 0.070 0.930 45 H 0.060 0.940 46 H 0.102 0.898 47 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.978 -7.601 -22.852 24.164 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.162 3.838 3 H 0.069 0.931 4 C -0.575 4.575 5 H 0.081 0.919 6 C -0.136 4.136 7 N -0.520 5.520 8 Si 0.731 3.269 9 H -0.211 1.211 10 H -0.201 1.201 11 H -0.201 1.201 12 N -0.337 5.337 13 C 0.280 3.720 14 O -0.409 6.409 15 C 0.063 3.937 16 F -0.162 7.162 17 C -0.173 4.173 18 C -0.018 4.018 19 N -0.344 5.344 20 C 0.427 3.573 21 O -0.452 6.452 22 O -0.275 6.275 23 C 0.098 3.902 24 C -0.241 4.241 25 C -0.197 4.197 26 C -0.241 4.241 27 C -0.007 4.007 28 H 0.111 0.889 29 H 0.035 0.965 30 H 0.048 0.952 31 H 0.076 0.924 32 H 0.227 0.773 33 H 0.131 0.869 34 H 0.121 0.879 35 H 0.095 0.905 36 H 0.098 0.902 37 H 0.079 0.921 38 H 0.089 0.911 39 H 0.107 0.893 40 H 0.086 0.914 41 H 0.099 0.901 42 H 0.085 0.915 43 H 0.107 0.893 44 H 0.089 0.911 45 H 0.079 0.921 46 H 0.120 0.880 47 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges 1.484 -7.054 -22.674 23.792 hybrid contribution 0.558 -1.049 0.870 1.472 sum 2.043 -8.102 -21.804 23.350 Atomic orbital electron populations 1.22094 0.98040 0.99410 1.01122 1.18872 0.91255 0.94044 0.79622 0.93057 1.21158 1.32752 1.13417 0.90171 0.91943 1.24879 0.94710 0.94925 0.99084 1.69884 1.35684 1.22347 1.24133 0.86474 0.79221 0.79614 0.81620 1.21097 1.20080 1.20114 1.46618 1.63002 1.13928 1.10182 1.19951 0.80164 0.87558 0.84305 1.90705 1.51090 1.14953 1.84165 1.22357 0.82306 0.92998 0.96055 1.92921 1.46181 1.81938 1.95151 1.23142 1.06432 0.97390 0.90296 1.22138 0.97158 0.85063 0.97412 1.47005 1.59220 1.18426 1.09786 1.17373 0.78083 0.81391 0.80453 1.90920 1.44779 1.34975 1.74531 1.86305 1.75097 1.45952 1.20126 1.22100 0.95266 0.82806 0.89995 1.22523 0.93957 1.02395 1.05239 1.21853 1.02395 1.03119 0.92317 1.22523 1.01010 0.96433 1.04165 1.22697 0.98246 1.00852 0.78904 0.88879 0.96550 0.95199 0.92424 0.77332 0.86858 0.87924 0.90526 0.90171 0.92145 0.91109 0.89311 0.91448 0.90118 0.91462 0.89300 0.91111 0.92119 0.87969 0.88447 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.54 9.26 37.16 0.34 -3.20 16 2 C 0.26 6.49 2.56 -69.09 -0.18 6.31 16 3 H 0.05 1.45 7.58 -51.93 -0.39 1.06 16 4 C -0.54 -14.00 8.73 -34.44 -0.30 -14.30 16 5 H 0.06 1.57 7.74 -52.49 -0.41 1.16 16 6 C 0.07 1.79 5.30 -17.82 -0.09 1.70 16 7 N -0.88 -24.40 11.32 55.43 0.63 -23.77 16 8 Si 0.90 20.49 29.54 -169.99 -5.02 15.47 16 9 H -0.29 -6.45 7.11 56.52 0.40 -6.04 16 10 H -0.28 -6.15 7.11 56.52 0.40 -5.75 16 11 H -0.28 -6.23 7.11 56.52 0.40 -5.82 16 12 N -0.69 -13.98 5.07 -54.93 -0.28 -14.26 16 13 C 0.50 9.39 6.88 -10.98 -0.08 9.31 16 14 O -0.53 -11.55 15.35 5.56 0.09 -11.46 16 15 C 0.09 1.25 1.47 -89.62 -0.13 1.12 16 16 F -0.18 -2.80 17.01 2.25 0.04 -2.76 16 17 C -0.13 -1.58 5.93 -24.90 -0.15 -1.73 16 18 C 0.10 1.09 6.89 -3.07 -0.02 1.07 16 19 N -0.60 -7.74 3.33 -176.30 -0.59 -8.32 16 20 C 0.67 9.21 7.93 54.06 0.43 9.64 16 21 O -0.56 -8.78 12.14 -19.27 -0.23 -9.02 16 22 O -0.36 -4.27 9.49 -40.30 -0.38 -4.65 16 23 C 0.13 1.29 1.13 -90.62 -0.10 1.19 16 24 C -0.18 -1.72 8.37 37.16 0.31 -1.41 16 25 C -0.14 -0.92 8.85 37.16 0.33 -0.60 16 26 C -0.18 -1.75 8.37 37.16 0.31 -1.44 16 27 C 0.12 1.56 6.18 -2.53 -0.02 1.54 16 28 H 0.09 2.44 6.07 -51.93 -0.32 2.12 16 29 H 0.02 0.36 8.14 -51.93 -0.42 -0.06 16 30 H 0.03 0.67 8.14 -51.93 -0.42 0.24 16 31 H 0.27 6.99 8.31 -40.82 -0.34 6.65 16 32 H 0.39 7.15 8.54 -40.82 -0.35 6.80 16 33 H 0.11 1.37 7.33 -51.93 -0.38 0.99 16 34 H 0.10 1.10 8.14 -51.93 -0.42 0.67 16 35 H 0.08 0.73 8.14 -51.93 -0.42 0.31 16 36 H 0.08 0.71 8.14 -51.93 -0.42 0.29 16 37 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 38 H 0.07 0.51 8.14 -51.93 -0.42 0.09 16 39 H 0.09 1.06 5.88 -51.93 -0.31 0.75 16 40 H 0.07 0.43 8.14 -51.93 -0.42 0.01 16 41 H 0.08 0.39 8.14 -51.93 -0.42 -0.03 16 42 H 0.07 0.43 8.14 -51.93 -0.42 0.00 16 43 H 0.09 1.08 5.88 -51.93 -0.31 0.77 16 44 H 0.07 0.52 8.14 -51.93 -0.42 0.10 16 45 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 46 H 0.10 1.40 8.04 -51.93 -0.42 0.98 16 47 H 0.10 1.29 8.03 -51.93 -0.42 0.88 16 LS Contribution 383.51 15.07 5.78 5.78 Total: -1.00 -30.58 383.51 -6.81 -37.39 By element: Atomic # 1 Polarization: 13.90 SS G_CDS: -7.50 Total: 6.41 kcal Atomic # 6 Polarization: 8.55 SS G_CDS: 0.66 Total: 9.21 kcal Atomic # 7 Polarization: -46.12 SS G_CDS: -0.24 Total: -46.35 kcal Atomic # 8 Polarization: -24.60 SS G_CDS: -0.53 Total: -25.13 kcal Atomic # 9 Polarization: -2.80 SS G_CDS: 0.04 Total: -2.76 kcal Atomic # 14 Polarization: 20.49 SS G_CDS: -5.02 Total: 15.47 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -30.58 -6.81 -37.39 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000175475484.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -126.322 kcal (2) G-P(sol) polarization free energy of solvation -30.579 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.900 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.711 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds