Wall clock time and date at job start Tue Mar 31 2020 17:09:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.08995 * 109.49631 * 2 1 4 4 C 1.53196 * 109.52083 * 239.91940 * 2 1 3 5 5 N 1.46931 * 108.77372 * 185.39649 * 4 2 1 6 6 C 1.36932 * 120.62704 * 233.58675 * 5 4 2 7 7 H 1.08005 * 120.00169 * 151.85280 * 6 5 4 8 8 C 1.38816 * 120.00440 * 331.84594 * 6 5 4 9 9 N 1.31618 * 119.99589 * 343.07484 * 8 6 5 10 10 Si 1.86799 * 120.00269 * 163.07471 * 8 6 5 11 11 H 1.48503 * 109.46743 * 90.00126 * 10 8 6 12 12 H 1.48495 * 109.47199 * 210.00083 * 10 8 6 13 13 H 1.48499 * 109.47123 * 330.00254 * 10 8 6 14 14 C 1.46920 * 118.73670 * 53.60888 * 5 4 2 15 15 C 1.53192 * 108.77972 * 306.38713 * 14 5 4 16 16 C 1.53036 * 109.49829 * 120.06686 * 2 1 3 17 17 H 1.08999 * 109.45759 * 301.34736 * 16 2 1 18 18 N 1.46493 * 109.46488 * 61.32642 * 16 2 1 19 19 C 1.34778 * 120.00501 * 204.72343 * 18 16 2 20 20 O 1.21288 * 119.99752 * 0.27801 * 19 18 16 21 21 C 1.50695 * 120.00349 * 180.27325 * 19 18 16 22 22 C 1.53001 * 109.47207 * 300.00292 * 21 19 18 23 23 C 1.52996 * 109.46909 * 180.02562 * 22 21 19 24 24 C 1.52996 * 109.47535 * 59.99818 * 23 22 21 25 25 F 1.39902 * 109.47482 * 179.97438 * 24 23 22 26 26 F 1.39901 * 109.47001 * 60.00105 * 24 23 22 27 27 C 1.53001 * 109.47171 * 300.00022 * 24 23 22 28 28 C 1.53000 * 109.47081 * 59.99919 * 27 24 23 29 29 H 1.09003 * 109.47186 * 299.93430 * 1 2 3 30 30 H 1.08998 * 109.47736 * 59.93327 * 1 2 3 31 31 H 1.09003 * 109.47161 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.58808 * 305.18300 * 4 2 1 33 33 H 1.08997 * 109.58712 * 65.46434 * 4 2 1 34 34 H 0.97005 * 119.99682 * 179.97438 * 9 8 6 35 35 H 1.08994 * 109.59185 * 66.17907 * 14 5 4 36 36 H 1.09008 * 109.58345 * 186.46269 * 14 5 4 37 37 H 1.09002 * 109.49889 * 294.69197 * 15 14 5 38 38 H 1.08994 * 109.50289 * 174.58938 * 15 14 5 39 39 H 0.97002 * 119.99877 * 24.99957 * 18 16 2 40 40 H 1.09000 * 109.47336 * 60.00342 * 21 19 18 41 41 H 1.08997 * 109.47027 * 299.99731 * 22 21 19 42 42 H 1.08996 * 109.46744 * 59.99714 * 22 21 19 43 43 H 1.09000 * 109.47398 * 299.99905 * 23 22 21 44 44 H 1.09003 * 109.47203 * 179.97438 * 23 22 21 45 45 H 1.08997 * 109.47027 * 299.99971 * 27 24 23 46 46 H 1.09004 * 109.46909 * 179.97438 * 27 24 23 47 47 H 1.08998 * 109.47279 * 180.02562 * 28 27 24 48 48 H 1.08997 * 109.47148 * 60.00126 * 28 27 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8937 1.0275 0.0000 4 6 2.0419 -0.7237 -1.2494 5 7 3.5052 -0.8284 -1.1691 6 6 4.2941 -0.3783 -2.1938 7 1 5.2966 -0.0312 -1.9912 8 6 3.8056 -0.3682 -3.4931 9 7 2.7426 -1.0803 -3.8019 10 14 4.6566 0.6560 -4.8031 11 1 5.7035 -0.1611 -5.4676 12 1 3.6597 1.0980 -5.8111 13 1 5.2831 1.8453 -4.1721 14 6 4.1058 -1.4255 0.0314 15 6 3.5709 -0.6940 1.2665 16 6 2.0408 -0.7228 1.2485 17 1 1.6580 -0.2240 2.1389 18 7 1.5790 -2.1129 1.2310 19 6 1.4562 -2.7969 2.3859 20 8 1.7233 -2.2598 3.4400 21 6 0.9871 -4.2288 2.3673 22 6 -0.4090 -4.3001 1.7453 23 6 -0.8855 -5.7539 1.7271 24 6 -0.9368 -6.2918 3.1585 25 9 -1.3731 -7.6209 3.1419 26 9 -1.8245 -5.5195 3.9153 27 6 0.4593 -6.2205 3.7805 28 6 0.9358 -4.7667 3.7988 29 1 -0.3634 0.5128 0.8906 30 1 -0.3634 0.5148 -0.8893 31 1 -0.3633 -1.0277 -0.0005 32 1 1.6063 -1.7217 -1.2979 33 1 1.7621 -0.1594 -2.1390 34 1 2.4010 -1.0730 -4.7098 35 1 3.8386 -2.4807 0.0875 36 1 5.1903 -1.3251 -0.0140 37 1 3.9154 0.3401 1.2545 38 1 3.9335 -1.1883 2.1677 39 1 1.3654 -2.5424 0.3879 40 1 1.6788 -4.8302 1.7775 41 1 -1.1007 -3.6988 2.3352 42 1 -0.3724 -3.9165 0.7258 43 1 -0.1938 -6.3556 1.1375 44 1 -1.8802 -5.8047 1.2844 45 1 1.1509 -6.8221 3.1909 46 1 0.4226 -6.6033 4.8005 47 1 1.9305 -4.7159 4.2415 48 1 0.2442 -4.1650 4.3884 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000942981259.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:09:19 Heat of formation + Delta-G solvation = -143.978501 kcal Electronic energy + Delta-G solvation = -30313.711916 eV Core-core repulsion = 26038.500333 eV Total energy + Delta-G solvation = -4275.211583 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.186 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -49.15210 -47.13600 -40.24651 -38.23471 -36.80287 -34.26308 -32.38324 -31.88747 -31.32689 -30.54525 -29.29592 -25.97670 -25.33582 -23.78581 -23.38942 -22.11082 -21.09413 -20.77960 -19.88291 -18.59749 -17.65990 -17.20515 -17.01550 -16.75815 -16.44851 -15.45696 -14.96737 -14.88739 -14.36673 -14.34256 -14.03159 -13.86499 -13.71096 -13.56567 -13.42301 -13.30970 -13.14510 -13.02173 -12.76225 -12.57862 -12.40531 -12.06061 -11.95094 -11.78327 -11.51803 -11.47235 -11.25137 -11.06627 -10.97339 -10.93133 -10.73702 -10.43467 -10.38186 -10.18118 -10.00319 -9.82442 -9.51703 -9.45197 -8.65685 -8.50708 -6.73303 -5.86639 -3.28445 2.83132 3.32775 3.40375 3.41111 3.42988 3.53153 3.82168 4.10352 4.14070 4.44113 4.56185 4.66255 4.79727 4.88350 4.97382 5.10223 5.24035 5.27036 5.33763 5.39387 5.42639 5.50184 5.50541 5.54779 5.64543 5.70015 5.73374 5.81683 5.91743 6.04116 6.07361 6.12296 6.17909 6.30580 6.42514 6.50977 6.52148 6.62025 6.74963 6.88693 6.99140 7.23166 7.53026 7.73361 7.83756 8.37841 8.48090 9.14174 9.77287 10.33689 11.21837 Molecular weight = 330.19amu Principal moments of inertia in cm(-1) A = 0.019306 B = 0.003012 C = 0.002882 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1449.950120 B = 9295.158773 C = 9712.897368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.128 4.128 3 H 0.077 0.923 4 C 0.180 3.820 5 N -0.592 5.592 6 C -0.252 4.252 7 H 0.065 0.935 8 C 0.004 3.996 9 N -0.903 5.903 10 Si 0.901 3.099 11 H -0.287 1.287 12 H -0.289 1.289 13 H -0.279 1.279 14 C 0.149 3.851 15 C -0.145 4.145 16 C 0.160 3.840 17 H 0.072 0.928 18 N -0.709 5.709 19 C 0.518 3.482 20 O -0.549 6.549 21 C -0.113 4.113 22 C -0.111 4.111 23 C -0.156 4.156 24 C 0.286 3.714 25 F -0.205 7.205 26 F -0.199 7.199 27 C -0.158 4.158 28 C -0.097 4.097 29 H 0.044 0.956 30 H 0.055 0.945 31 H 0.049 0.951 32 H 0.015 0.985 33 H 0.090 0.910 34 H 0.254 0.746 35 H 0.016 0.984 36 H 0.052 0.948 37 H 0.066 0.934 38 H 0.055 0.945 39 H 0.403 0.597 40 H 0.102 0.898 41 H 0.079 0.921 42 H 0.086 0.914 43 H 0.098 0.902 44 H 0.091 0.909 45 H 0.095 0.905 46 H 0.089 0.911 47 H 0.085 0.915 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.376 -8.461 11.673 16.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.149 4.149 3 H 0.096 0.904 4 C 0.054 3.946 5 N -0.314 5.314 6 C -0.382 4.382 7 H 0.082 0.918 8 C -0.195 4.195 9 N -0.548 5.548 10 Si 0.731 3.269 11 H -0.214 1.214 12 H -0.216 1.216 13 H -0.205 1.205 14 C 0.022 3.978 15 C -0.186 4.186 16 C 0.056 3.944 17 H 0.090 0.910 18 N -0.360 5.360 19 C 0.303 3.697 20 O -0.427 6.427 21 C -0.135 4.135 22 C -0.149 4.149 23 C -0.194 4.194 24 C 0.250 3.750 25 F -0.186 7.186 26 F -0.180 7.180 27 C -0.196 4.196 28 C -0.135 4.135 29 H 0.063 0.937 30 H 0.074 0.926 31 H 0.068 0.932 32 H 0.032 0.968 33 H 0.108 0.892 34 H 0.064 0.936 35 H 0.034 0.966 36 H 0.070 0.930 37 H 0.085 0.915 38 H 0.074 0.926 39 H 0.239 0.761 40 H 0.120 0.880 41 H 0.098 0.902 42 H 0.105 0.895 43 H 0.117 0.883 44 H 0.109 0.891 45 H 0.114 0.886 46 H 0.108 0.892 47 H 0.104 0.896 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -7.276 -8.088 12.251 16.384 hybrid contribution 0.177 0.153 -1.150 1.173 sum -7.099 -7.935 11.101 15.382 Atomic orbital electron populations 1.21714 0.95866 1.01164 1.00868 1.22133 0.94729 1.00788 0.97240 0.90443 1.20767 0.83173 0.96467 0.94242 1.44046 1.01615 1.69546 1.16207 1.19174 0.97998 1.35310 0.85725 0.91754 1.25013 0.98497 0.98989 0.96967 1.70007 1.25693 1.40302 1.18777 0.86321 0.78688 0.80386 0.81525 1.21409 1.21553 1.20492 1.20849 0.96491 0.94025 0.86418 1.22378 0.95184 1.01686 0.99309 1.20882 0.94239 0.80872 0.98456 0.90987 1.46190 1.66752 1.14214 1.08885 1.20333 0.77499 0.87817 0.84044 1.90670 1.50932 1.70268 1.30824 1.21434 0.98330 0.94818 0.98885 1.21512 0.95386 0.95339 1.02679 1.22513 1.04978 0.98287 0.93609 1.21171 0.87680 0.73434 0.92704 1.93004 1.91332 1.36879 1.97350 1.92999 1.71360 1.75290 1.78349 1.22558 0.93686 1.00054 1.03271 1.21299 1.03654 0.93059 0.95500 0.93710 0.92638 0.93220 0.96754 0.89201 0.93645 0.96627 0.92984 0.91512 0.92611 0.76096 0.88000 0.90230 0.89550 0.88350 0.89065 0.88620 0.89245 0.89639 0.90111 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.02 9.06 37.16 0.34 -1.69 16 2 C -0.13 -2.21 2.67 -90.50 -0.24 -2.45 16 3 H 0.08 1.41 8.14 -51.93 -0.42 0.99 16 4 C 0.18 3.82 4.29 -3.71 -0.02 3.81 16 5 N -0.59 -13.80 2.99 -172.32 -0.52 -14.31 16 6 C -0.25 -6.62 9.58 -15.06 -0.14 -6.77 16 7 H 0.06 1.68 7.89 -52.48 -0.41 1.27 16 8 C 0.00 0.10 4.92 -17.43 -0.09 0.02 16 9 N -0.90 -24.72 11.19 55.49 0.62 -24.10 16 10 Si 0.90 20.95 29.59 -169.99 -5.03 15.92 16 11 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 12 H -0.29 -6.78 7.11 56.52 0.40 -6.37 16 13 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 14 C 0.15 2.98 6.26 -3.71 -0.02 2.95 16 15 C -0.15 -2.55 5.77 -26.61 -0.15 -2.70 16 16 C 0.16 2.62 2.21 -67.89 -0.15 2.47 16 17 H 0.07 1.22 7.58 -51.93 -0.39 0.83 16 18 N -0.71 -10.33 3.49 -53.77 -0.19 -10.51 16 19 C 0.52 7.32 7.12 -10.99 -0.08 7.24 16 20 O -0.55 -9.56 15.65 5.55 0.09 -9.47 16 21 C -0.11 -1.18 2.53 -91.77 -0.23 -1.41 16 22 C -0.11 -1.02 4.98 -26.73 -0.13 -1.16 16 23 C -0.16 -1.28 5.45 -26.74 -0.15 -1.42 16 24 C 0.29 2.75 2.10 -26.73 -0.06 2.69 16 25 F -0.20 -2.21 17.06 2.25 0.04 -2.17 16 26 F -0.20 -2.30 16.02 2.25 0.04 -2.27 16 27 C -0.16 -1.30 5.45 -26.73 -0.15 -1.45 16 28 C -0.10 -0.97 4.37 -26.73 -0.12 -1.09 16 29 H 0.04 0.60 8.14 -51.93 -0.42 0.18 16 30 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 31 H 0.05 0.68 7.54 -51.93 -0.39 0.29 16 32 H 0.01 0.31 6.64 -51.93 -0.34 -0.03 16 33 H 0.09 2.21 6.07 -51.93 -0.31 1.90 16 34 H 0.25 6.76 8.31 -40.82 -0.34 6.42 16 35 H 0.02 0.32 7.74 -51.93 -0.40 -0.09 16 36 H 0.05 1.05 7.93 -51.92 -0.41 0.64 16 37 H 0.07 1.19 8.14 -51.93 -0.42 0.76 16 38 H 0.06 0.96 8.14 -51.93 -0.42 0.54 16 39 H 0.40 5.74 6.15 -40.82 -0.25 5.49 16 40 H 0.10 0.93 8.14 -51.93 -0.42 0.51 16 41 H 0.08 0.81 7.80 -51.93 -0.41 0.40 16 42 H 0.09 0.76 7.56 -51.93 -0.39 0.36 16 43 H 0.10 0.67 8.14 -51.93 -0.42 0.25 16 44 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 45 H 0.10 0.65 8.14 -51.93 -0.42 0.22 16 46 H 0.09 0.69 8.14 -51.93 -0.42 0.26 16 47 H 0.08 0.88 8.10 -51.93 -0.42 0.46 16 48 H 0.08 0.93 7.76 -51.93 -0.40 0.52 16 LS Contribution 372.54 15.07 5.61 5.61 Total: -1.00 -29.49 372.54 -8.63 -38.12 By element: Atomic # 1 Polarization: 12.05 SS G_CDS: -7.91 Total: 4.14 kcal Atomic # 6 Polarization: 0.42 SS G_CDS: -1.39 Total: -0.96 kcal Atomic # 7 Polarization: -48.84 SS G_CDS: -0.08 Total: -48.92 kcal Atomic # 8 Polarization: -9.56 SS G_CDS: 0.09 Total: -9.47 kcal Atomic # 9 Polarization: -4.51 SS G_CDS: 0.07 Total: -4.44 kcal Atomic # 14 Polarization: 20.95 SS G_CDS: -5.03 Total: 15.92 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -29.49 -8.63 -38.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000942981259.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.859 kcal (2) G-P(sol) polarization free energy of solvation -29.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.350 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.119 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.979 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds