Wall clock time and date at job start Tue Mar 31 2020 17:00:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.09001 * 109.58746 * 2 1 4 4 C 1.53192 * 109.71674 * 120.36656 * 2 1 3 5 5 C 1.53031 * 109.31396 * 65.20080 * 4 2 1 6 6 H 1.09004 * 109.46392 * 301.37466 * 5 4 2 7 7 N 1.46501 * 109.46112 * 181.39838 * 5 4 2 8 8 C 1.34780 * 120.00029 * 154.96947 * 7 5 4 9 9 O 1.21288 * 119.99885 * 0.02562 * 8 7 5 10 10 C 1.50692 * 120.00247 * 180.02562 * 8 7 5 11 11 C 1.53003 * 109.47309 * 300.00521 * 10 8 7 12 12 C 1.53000 * 109.46927 * 179.97438 * 11 10 8 13 13 C 1.52996 * 109.47353 * 60.00296 * 12 11 10 14 14 F 1.39904 * 109.46956 * 59.99487 * 13 12 11 15 15 F 1.39901 * 109.47289 * 179.97438 * 13 12 11 16 16 C 1.53003 * 109.46863 * 299.99743 * 13 12 11 17 17 C 1.52994 * 109.47443 * 180.02562 * 10 8 7 18 18 C 1.53042 * 109.52813 * 61.38639 * 5 4 2 19 19 C 1.53194 * 109.31151 * 298.63153 * 18 5 4 20 20 N 1.46920 * 108.77804 * 54.63049 * 19 18 5 21 21 C 1.36939 * 120.63140 * 126.41018 * 20 19 18 22 22 H 1.07995 * 120.00730 * 207.67849 * 21 20 19 23 23 C 1.38814 * 119.99437 * 27.68140 * 21 20 19 24 24 N 1.31618 * 120.00491 * 17.35026 * 23 21 20 25 25 Si 1.86799 * 119.99718 * 197.35233 * 23 21 20 26 26 H 1.48498 * 109.47419 * 90.00214 * 25 23 21 27 27 H 1.48505 * 109.47529 * 209.99884 * 25 23 21 28 28 H 1.48501 * 109.47276 * 330.00085 * 25 23 21 29 29 H 1.08998 * 109.46998 * 180.27637 * 1 2 3 30 30 H 1.08995 * 109.47052 * 300.27941 * 1 2 3 31 31 H 1.09001 * 109.46869 * 60.28169 * 1 2 3 32 32 H 1.08998 * 109.48385 * 305.25358 * 4 2 1 33 33 H 1.09006 * 109.50585 * 185.16231 * 4 2 1 34 34 H 0.96991 * 120.00215 * 334.97930 * 7 5 4 35 35 H 1.09001 * 109.47027 * 60.00557 * 10 8 7 36 36 H 1.09000 * 109.46611 * 59.99912 * 11 10 8 37 37 H 1.08988 * 109.47156 * 299.99669 * 11 10 8 38 38 H 1.09004 * 109.47345 * 299.99573 * 12 11 10 39 39 H 1.09002 * 109.46750 * 180.02562 * 12 11 10 40 40 H 1.08999 * 109.47056 * 180.02562 * 16 13 12 41 41 H 1.09001 * 109.47106 * 299.99671 * 16 13 12 42 42 H 1.09000 * 109.47328 * 60.00551 * 17 10 8 43 43 H 1.09002 * 109.47334 * 300.00339 * 17 10 8 44 44 H 1.09004 * 109.49654 * 58.57675 * 18 5 4 45 45 H 1.09001 * 109.49963 * 178.64578 * 18 5 4 46 46 H 1.09001 * 109.58223 * 174.42135 * 19 18 5 47 47 H 1.09004 * 109.58141 * 294.84127 * 19 18 5 48 48 H 0.97002 * 120.00369 * 179.97438 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8954 1.0269 0.0000 4 6 2.0468 -0.7290 1.2443 5 6 1.6473 -2.2044 1.1689 6 1 0.5624 -2.2838 1.0992 7 7 2.1111 -2.8977 2.3733 8 6 1.4860 -4.0169 2.7894 9 8 0.5398 -4.4503 2.1665 10 6 1.9626 -4.7298 4.0285 11 6 3.4163 -5.1674 3.8379 12 6 3.9003 -5.8907 5.0963 13 6 3.0259 -7.1211 5.3455 14 9 3.1128 -7.9850 4.2485 15 9 3.4689 -7.7828 6.4959 16 6 1.5722 -6.6835 5.5362 17 6 1.0884 -5.9606 4.2770 18 6 2.2857 -2.8448 -0.0658 19 6 1.7719 -2.1398 -1.3251 20 7 2.0225 -0.6979 -1.1954 21 6 2.7019 -0.0174 -2.1703 22 1 3.2656 0.8685 -1.9178 23 6 2.6659 -0.4662 -3.4834 24 7 1.7346 -1.3150 -3.8636 25 14 3.9395 0.1343 -4.7109 26 1 5.1122 -0.7766 -4.6933 27 1 3.3461 0.1508 -6.0721 28 1 4.3730 1.5063 -4.3432 29 1 -0.3633 -1.0276 0.0050 30 1 -0.3633 0.5181 0.8874 31 1 -0.3633 0.5095 -0.8925 32 1 1.6111 -0.2792 2.1364 33 1 3.1329 -0.6479 1.2888 34 1 2.8679 -2.5513 2.8713 35 1 1.8948 -4.0571 4.8835 36 1 4.0393 -4.2908 3.6607 37 1 3.4841 -5.8401 2.9830 38 1 3.8327 -5.2176 5.9510 39 1 4.9361 -6.2020 4.9606 40 1 0.9493 -7.5601 5.7143 41 1 1.5045 -6.0105 6.3909 42 1 1.1566 -6.6333 3.4220 43 1 0.0527 -5.6493 4.4127 44 1 3.3695 -2.7436 -0.0088 45 1 2.0205 -3.9013 -0.1058 46 1 2.2970 -2.5248 -2.1992 47 1 0.7016 -2.3166 -1.4318 48 1 1.7093 -1.6283 -4.7813 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000947749924.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:00:16 Heat of formation + Delta-G solvation = -142.999720 kcal Electronic energy + Delta-G solvation = -29722.981842 eV Core-core repulsion = 25447.812702 eV Total energy + Delta-G solvation = -4275.169140 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.186 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -49.23005 -47.21415 -40.21646 -38.19090 -36.97443 -34.53333 -32.59386 -31.55003 -31.11471 -30.38766 -29.26351 -26.91757 -24.57335 -23.72546 -23.48793 -21.98860 -21.67490 -20.70605 -19.93632 -18.45043 -17.72471 -17.26733 -17.12746 -16.62247 -16.46281 -15.92001 -15.05054 -14.81236 -14.41521 -14.31895 -14.01258 -13.80012 -13.74382 -13.69743 -13.49465 -13.31381 -13.09751 -12.83932 -12.67541 -12.61591 -12.35663 -12.21935 -12.06329 -11.85661 -11.60183 -11.42296 -11.10256 -11.02982 -10.93930 -10.80059 -10.62896 -10.49405 -10.35911 -10.18545 -10.03290 -9.72602 -9.67861 -9.32184 -8.72601 -8.41501 -6.70231 -5.79077 -3.21777 2.72528 3.26929 3.37517 3.43558 3.44205 3.45390 3.72019 3.99971 4.02847 4.44095 4.47894 4.54690 4.68334 4.75293 4.85291 4.98075 5.19791 5.23079 5.31619 5.36808 5.38198 5.39100 5.41063 5.58270 5.60499 5.63963 5.77651 5.81228 5.99663 6.01114 6.05546 6.24514 6.30731 6.41754 6.45480 6.56797 6.64976 6.78348 6.87548 6.94620 7.14672 7.38347 7.66328 7.71279 7.79411 8.37826 8.44847 9.20628 9.84105 10.40607 11.29049 Molecular weight = 330.19amu Principal moments of inertia in cm(-1) A = 0.021634 B = 0.002609 C = 0.002491 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1293.962830 B =10730.180314 C =11236.884542 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.170 3.830 3 H 0.065 0.935 4 C -0.132 4.132 5 C 0.149 3.851 6 H 0.085 0.915 7 N -0.724 5.724 8 C 0.514 3.486 9 O -0.537 6.537 10 C -0.112 4.112 11 C -0.112 4.112 12 C -0.155 4.155 13 C 0.286 3.714 14 F -0.197 7.197 15 F -0.205 7.205 16 C -0.157 4.157 17 C -0.100 4.100 18 C -0.146 4.146 19 C 0.174 3.826 20 N -0.585 5.585 21 C -0.254 4.254 22 H 0.066 0.934 23 C 0.004 3.996 24 N -0.900 5.900 25 Si 0.902 3.098 26 H -0.288 1.288 27 H -0.292 1.292 28 H -0.279 1.279 29 H 0.049 0.951 30 H 0.036 0.964 31 H 0.055 0.945 32 H 0.055 0.945 33 H 0.062 0.938 34 H 0.393 0.607 35 H 0.100 0.900 36 H 0.084 0.916 37 H 0.081 0.919 38 H 0.096 0.904 39 H 0.091 0.909 40 H 0.090 0.910 41 H 0.094 0.906 42 H 0.082 0.918 43 H 0.086 0.914 44 H 0.054 0.946 45 H 0.052 0.948 46 H 0.089 0.911 47 H 0.021 0.979 48 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.532 -7.271 21.340 22.686 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.222 4.222 2 C 0.062 3.938 3 H 0.083 0.917 4 C -0.172 4.172 5 C 0.046 3.954 6 H 0.103 0.897 7 N -0.373 5.373 8 C 0.300 3.700 9 O -0.413 6.413 10 C -0.133 4.133 11 C -0.150 4.150 12 C -0.193 4.193 13 C 0.250 3.750 14 F -0.178 7.178 15 F -0.186 7.186 16 C -0.195 4.195 17 C -0.138 4.138 18 C -0.187 4.187 19 C 0.048 3.952 20 N -0.307 5.307 21 C -0.383 4.383 22 H 0.084 0.916 23 C -0.195 4.195 24 N -0.544 5.544 25 Si 0.732 3.268 26 H -0.215 1.215 27 H -0.218 1.218 28 H -0.205 1.205 29 H 0.068 0.932 30 H 0.055 0.945 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.081 0.919 34 H 0.227 0.773 35 H 0.118 0.882 36 H 0.103 0.897 37 H 0.100 0.900 38 H 0.115 0.885 39 H 0.109 0.891 40 H 0.109 0.891 41 H 0.113 0.887 42 H 0.101 0.899 43 H 0.104 0.896 44 H 0.073 0.927 45 H 0.070 0.930 46 H 0.107 0.893 47 H 0.039 0.961 48 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 1.829 -7.669 20.681 22.133 hybrid contribution 1.080 0.222 -0.400 1.173 sum 2.909 -7.447 20.281 21.800 Atomic orbital electron populations 1.22301 0.98711 1.01101 1.00069 1.20433 0.91769 0.95095 0.86541 0.91706 1.22290 1.01107 0.94228 0.99551 1.21108 0.99781 0.91293 0.83264 0.89710 1.46353 1.34626 1.27116 1.29254 1.20376 0.83051 0.80839 0.85768 1.90725 1.28083 1.65456 1.57050 1.21435 0.96282 0.98115 0.97494 1.21518 0.94294 1.01481 0.97677 1.22508 1.00340 0.95604 1.00881 1.21162 0.96651 0.85038 0.72191 1.93016 1.97331 1.72735 1.54740 1.93005 1.91187 1.83282 1.51092 1.22563 0.92923 1.02992 1.01044 1.21331 0.99875 0.95664 0.96907 1.22562 1.00096 0.99144 0.96864 1.20741 0.97709 0.82871 0.93924 1.44170 1.63913 1.03423 1.19147 1.19171 1.22233 1.10178 0.86749 0.91639 1.25048 0.97690 0.99998 0.96798 1.70035 1.31705 1.35659 1.16958 0.86307 0.81348 0.78460 0.80723 1.21496 1.21808 1.20474 0.93216 0.94532 0.92596 0.92663 0.91925 0.77315 0.88233 0.89746 0.89992 0.88528 0.89059 0.89139 0.88723 0.89888 0.89564 0.92746 0.92965 0.89313 0.96110 0.93596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.06 9.03 37.16 0.34 -2.73 16 2 C 0.17 3.34 3.28 -67.60 -0.22 3.12 16 3 H 0.06 1.27 7.93 -51.93 -0.41 0.86 16 4 C -0.13 -2.09 5.02 -26.62 -0.13 -2.23 16 5 C 0.15 2.46 2.21 -67.89 -0.15 2.31 16 6 H 0.08 1.60 5.94 -51.93 -0.31 1.29 16 7 N -0.72 -9.20 4.97 -53.77 -0.27 -9.47 16 8 C 0.51 6.82 7.12 -10.99 -0.08 6.74 16 9 O -0.54 -9.55 15.65 5.55 0.09 -9.46 16 10 C -0.11 -0.98 2.53 -91.78 -0.23 -1.21 16 11 C -0.11 -0.87 4.98 -26.73 -0.13 -1.00 16 12 C -0.16 -1.03 5.45 -26.73 -0.15 -1.18 16 13 C 0.29 2.47 2.10 -26.73 -0.06 2.41 16 14 F -0.20 -2.21 16.02 2.25 0.04 -2.17 16 15 F -0.20 -2.01 17.06 2.25 0.04 -1.97 16 16 C -0.16 -1.14 5.46 -26.71 -0.15 -1.28 16 17 C -0.10 -0.92 4.37 -26.71 -0.12 -1.03 16 18 C -0.15 -2.84 5.65 -26.61 -0.15 -2.99 16 19 C 0.17 4.13 4.90 -3.71 -0.02 4.11 16 20 N -0.58 -14.03 2.70 -164.78 -0.45 -14.48 16 21 C -0.25 -6.75 9.59 -15.06 -0.14 -6.90 16 22 H 0.07 1.71 7.89 -52.49 -0.41 1.30 16 23 C 0.00 0.10 4.91 -17.43 -0.09 0.01 16 24 N -0.90 -25.88 11.19 55.49 0.62 -25.26 16 25 Si 0.90 21.43 29.59 -169.99 -5.03 16.40 16 26 H -0.29 -6.84 7.11 56.52 0.40 -6.44 16 27 H -0.29 -7.05 7.11 56.52 0.40 -6.64 16 28 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 29 H 0.05 0.98 5.74 -51.93 -0.30 0.68 16 30 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 31 H 0.05 1.16 8.14 -51.93 -0.42 0.73 16 32 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 33 H 0.06 0.98 8.14 -51.93 -0.42 0.55 16 34 H 0.39 3.78 8.02 -40.82 -0.33 3.45 16 35 H 0.10 0.63 8.14 -51.93 -0.42 0.21 16 36 H 0.08 0.54 7.56 -51.93 -0.39 0.14 16 37 H 0.08 0.79 7.80 -51.94 -0.41 0.39 16 38 H 0.10 0.45 8.14 -51.93 -0.42 0.03 16 39 H 0.09 0.57 8.14 -51.93 -0.42 0.15 16 40 H 0.09 0.63 8.14 -51.93 -0.42 0.21 16 41 H 0.09 0.50 8.14 -51.93 -0.42 0.08 16 42 H 0.08 0.94 7.76 -51.93 -0.40 0.53 16 43 H 0.09 0.81 8.10 -51.93 -0.42 0.39 16 44 H 0.05 1.05 8.14 -51.93 -0.42 0.62 16 45 H 0.05 1.03 8.14 -51.93 -0.42 0.61 16 46 H 0.09 2.38 6.04 -51.93 -0.31 2.07 16 47 H 0.02 0.53 7.50 -51.93 -0.39 0.14 16 48 H 0.25 7.11 8.31 -40.82 -0.34 6.77 16 LS Contribution 373.25 15.07 5.62 5.62 Total: -1.00 -31.43 373.25 -8.68 -40.12 By element: Atomic # 1 Polarization: 10.39 SS G_CDS: -7.87 Total: 2.52 kcal Atomic # 6 Polarization: -0.37 SS G_CDS: -1.48 Total: -1.84 kcal Atomic # 7 Polarization: -49.12 SS G_CDS: -0.09 Total: -49.21 kcal Atomic # 8 Polarization: -9.55 SS G_CDS: 0.09 Total: -9.46 kcal Atomic # 9 Polarization: -4.22 SS G_CDS: 0.07 Total: -4.14 kcal Atomic # 14 Polarization: 21.43 SS G_CDS: -5.03 Total: 16.40 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -31.43 -8.68 -40.12 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000947749924.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -102.885 kcal (2) G-P(sol) polarization free energy of solvation -31.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -134.320 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.680 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.115 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.000 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds