Wall clock time and date at job start Tue Mar 31 2020 17:06:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09003 * 110.30571 * 2 1 4 4 C 1.54394 * 110.34346 * 237.82608 * 2 1 3 5 5 N 1.48141 * 104.61775 * 217.15634 * 4 2 1 6 6 C 1.34781 * 127.83878 * 219.58767 * 5 4 2 7 7 O 1.21278 * 119.99864 * 354.94459 * 6 5 4 8 8 C 1.50695 * 120.00250 * 175.22141 * 6 5 4 9 9 H 1.09008 * 110.43330 * 334.79880 * 8 6 5 10 10 C 1.54265 * 110.48720 * 212.25598 * 8 6 5 11 11 C 1.53874 * 106.59792 * 217.70881 * 10 8 6 12 12 C 1.54267 * 106.59751 * 359.97438 * 11 10 8 13 13 F 1.39906 * 110.48347 * 142.28852 * 12 11 10 14 14 F 1.39901 * 110.48932 * 264.92583 * 12 11 10 15 15 C 1.54891 * 110.49051 * 97.33487 * 8 6 5 16 16 C 1.48148 * 104.32634 * 39.84402 * 5 4 2 17 17 C 1.54285 * 110.43177 * 122.23352 * 2 1 3 18 18 C 1.52999 * 110.34517 * 0.04986 * 17 2 1 19 19 C 1.53003 * 110.34224 * 237.89134 * 17 2 1 20 20 N 1.46505 * 109.46922 * 180.02562 * 19 17 2 21 21 C 1.36939 * 119.99772 * 180.02562 * 20 19 17 22 22 H 1.07993 * 119.99783 * 359.97438 * 21 20 19 23 23 C 1.38813 * 119.99722 * 179.97438 * 21 20 19 24 24 N 1.31620 * 119.99918 * 0.02562 * 23 21 20 25 25 Si 1.86797 * 119.99723 * 179.97438 * 23 21 20 26 26 H 1.48496 * 109.47272 * 359.97438 * 25 23 21 27 27 H 1.48502 * 109.47244 * 120.00135 * 25 23 21 28 28 H 1.48500 * 109.46898 * 240.00039 * 25 23 21 29 29 H 1.09005 * 109.46842 * 180.72083 * 1 2 3 30 30 H 1.09002 * 109.47066 * 300.71728 * 1 2 3 31 31 H 1.08996 * 109.47414 * 60.72101 * 1 2 3 32 32 H 1.09001 * 110.40590 * 98.37003 * 4 2 1 33 33 H 1.09001 * 110.40357 * 335.94046 * 4 2 1 34 34 H 1.08996 * 110.03118 * 336.99735 * 10 8 6 35 35 H 1.09006 * 110.03221 * 98.42468 * 10 8 6 36 36 H 1.09004 * 110.03032 * 119.28474 * 11 10 8 37 37 H 1.09008 * 110.03225 * 240.66546 * 11 10 8 38 38 H 1.08997 * 110.75855 * 274.94286 * 15 8 6 39 39 H 1.09004 * 110.75164 * 38.30759 * 15 8 6 40 40 H 1.09001 * 110.40727 * 78.93976 * 16 5 4 41 41 H 1.08998 * 110.41050 * 201.37080 * 16 5 4 42 42 H 1.08994 * 109.47156 * 59.99452 * 18 17 2 43 43 H 1.08996 * 109.46840 * 179.97438 * 18 17 2 44 44 H 1.09003 * 109.46687 * 299.99546 * 18 17 2 45 45 H 1.08998 * 109.47285 * 299.99855 * 19 17 2 46 46 H 1.08991 * 109.47056 * 60.00535 * 19 17 2 47 47 H 0.96998 * 119.99846 * 359.97438 * 20 19 17 48 48 H 0.97001 * 119.99288 * 180.02562 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9082 1.0223 0.0000 4 6 2.0667 -0.7709 -1.2253 5 7 3.2679 -1.4789 -0.7248 6 6 4.4437 -1.6616 -1.3579 7 8 4.5757 -1.3000 -2.5079 8 6 5.5922 -2.3208 -0.6387 9 1 5.4936 -2.1872 0.4386 10 6 6.9375 -1.7501 -1.1328 11 6 7.9250 -2.9293 -1.1785 12 6 7.1454 -4.1753 -0.7100 13 9 7.5337 -5.3007 -1.4448 14 9 7.3427 -4.3906 0.6582 15 6 5.6616 -3.8269 -0.9939 16 6 2.8814 -1.9460 0.6269 17 6 2.0686 -0.7711 1.2230 18 6 0.9100 -1.3052 2.0676 19 6 2.9688 0.1329 2.0675 20 7 3.4696 -0.6177 3.2218 21 6 4.2999 -0.0103 4.1255 22 1 4.5860 1.0219 3.9871 23 6 4.7740 -0.7213 5.2194 24 7 4.4257 -1.9793 5.3877 25 14 5.9073 0.1071 6.4518 26 1 6.1464 1.5128 6.0373 27 1 5.2761 0.0874 7.7959 28 1 7.2008 -0.6206 6.5016 29 1 -0.3633 -1.0276 0.0129 30 1 -0.3633 0.5249 0.8835 31 1 -0.3634 0.5026 -0.8963 32 1 2.3383 -0.0776 -2.0214 33 1 1.3241 -1.4858 -1.5796 34 1 6.8189 -1.3235 -2.1288 35 1 7.2969 -0.9887 -0.4404 36 1 8.2857 -3.0750 -2.1967 37 1 8.7641 -2.7398 -0.5089 38 1 4.9971 -4.4060 -0.3527 39 1 5.4221 -3.9872 -2.0452 40 1 2.2642 -2.8418 0.5574 41 1 3.7683 -2.1404 1.2299 42 1 0.2999 -1.9771 1.4640 43 1 1.3061 -1.8472 2.9263 44 1 0.2986 -0.4718 2.4139 45 1 3.8098 0.4742 1.4640 46 1 2.3969 0.9937 2.4138 47 1 3.2123 -1.5446 3.3462 48 1 4.7567 -2.4760 6.1524 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001181694279.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:06:39 Heat of formation + Delta-G solvation = -132.959877 kcal Electronic energy + Delta-G solvation = -30436.606752 eV Core-core repulsion = 26161.872972 eV Total energy + Delta-G solvation = -4274.733780 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.186 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.87096 -46.99834 -40.48373 -38.77713 -36.47932 -34.71912 -33.37225 -31.65163 -29.82461 -29.51627 -28.34380 -26.86913 -25.71548 -25.62651 -23.44400 -22.09766 -21.17519 -20.84356 -19.13014 -18.36059 -17.94240 -17.31793 -16.92833 -16.65927 -15.86719 -15.63755 -15.23246 -15.04073 -14.73804 -14.41587 -14.21130 -13.97720 -13.74751 -13.63916 -13.32066 -13.25815 -13.07605 -12.94620 -12.71413 -12.43373 -12.17159 -12.05487 -11.87929 -11.72939 -11.61331 -11.45270 -11.44466 -11.26672 -11.01632 -10.87543 -10.80486 -10.71541 -10.50830 -10.34799 -10.20706 -9.94260 -9.74150 -9.63800 -8.92192 -8.64177 -6.96414 -5.81027 -3.09358 2.56545 2.94562 3.40960 3.47307 3.49051 3.65314 3.76916 4.10247 4.27661 4.49785 4.57320 4.66728 4.82968 4.87955 4.94165 5.02700 5.10120 5.18185 5.25749 5.27726 5.36351 5.46979 5.48131 5.51678 5.56998 5.62331 5.68866 5.73098 5.75067 5.84989 5.86952 5.93714 5.97709 6.03138 6.08129 6.10408 6.19502 6.28063 6.37769 6.46685 6.64569 6.72973 6.81803 7.60105 7.67835 8.17526 8.37967 9.49861 10.05537 10.40552 11.41669 Molecular weight = 330.19amu Principal moments of inertia in cm(-1) A = 0.007865 B = 0.005331 C = 0.003545 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3559.341151 B = 5250.661281 C = 7897.377806 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.141 4.141 2 C -0.098 4.098 3 H 0.081 0.919 4 C 0.111 3.889 5 N -0.616 5.616 6 C 0.550 3.450 7 O -0.547 6.547 8 C -0.114 4.114 9 H 0.115 0.885 10 C -0.109 4.109 11 C -0.158 4.158 12 C 0.280 3.720 13 F -0.199 7.199 14 F -0.187 7.187 15 C -0.142 4.142 16 C 0.104 3.896 17 C -0.075 4.075 18 C -0.135 4.135 19 C 0.167 3.833 20 N -0.730 5.730 21 C -0.239 4.239 22 H 0.069 0.931 23 C -0.011 4.011 24 N -0.931 5.931 25 Si 0.903 3.097 26 H -0.281 1.281 27 H -0.292 1.292 28 H -0.291 1.291 29 H 0.060 0.940 30 H 0.063 0.937 31 H 0.051 0.949 32 H 0.078 0.922 33 H 0.069 0.931 34 H 0.093 0.907 35 H 0.083 0.917 36 H 0.097 0.903 37 H 0.094 0.906 38 H 0.098 0.902 39 H 0.103 0.897 40 H 0.071 0.929 41 H 0.097 0.903 42 H 0.050 0.950 43 H 0.069 0.931 44 H 0.060 0.940 45 H 0.018 0.982 46 H 0.022 0.978 47 H 0.384 0.616 48 H 0.255 0.745 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.897 -1.798 -14.534 14.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 C -0.118 4.118 3 H 0.100 0.900 4 C -0.012 4.012 5 N -0.348 5.348 6 C 0.339 3.661 7 O -0.426 6.426 8 C -0.135 4.135 9 H 0.133 0.867 10 C -0.147 4.147 11 C -0.196 4.196 12 C 0.244 3.756 13 F -0.180 7.180 14 F -0.168 7.168 15 C -0.181 4.181 16 C -0.019 4.019 17 C -0.076 4.076 18 C -0.192 4.192 19 C 0.040 3.960 20 N -0.375 5.375 21 C -0.370 4.370 22 H 0.087 0.913 23 C -0.207 4.207 24 N -0.580 5.580 25 Si 0.735 3.265 26 H -0.206 1.206 27 H -0.219 1.219 28 H -0.218 1.218 29 H 0.079 0.921 30 H 0.082 0.918 31 H 0.070 0.930 32 H 0.097 0.903 33 H 0.087 0.913 34 H 0.112 0.888 35 H 0.102 0.898 36 H 0.116 0.884 37 H 0.113 0.887 38 H 0.117 0.883 39 H 0.121 0.879 40 H 0.089 0.911 41 H 0.115 0.885 42 H 0.069 0.931 43 H 0.087 0.913 44 H 0.079 0.921 45 H 0.036 0.964 46 H 0.039 0.961 47 H 0.219 0.781 48 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges -2.592 -1.530 -15.104 15.401 hybrid contribution 0.603 -0.058 1.077 1.236 sum -1.989 -1.587 -14.026 14.255 Atomic orbital electron populations 1.21881 0.94150 1.02132 1.01691 1.22150 0.96055 0.99794 0.93805 0.90033 1.22394 0.86321 0.95573 0.96898 1.48946 1.12556 1.55066 1.18232 1.19813 0.81909 0.78498 0.85911 1.90661 1.82386 1.52329 1.17190 1.22090 0.94197 0.94317 1.02926 0.86717 1.22072 0.91418 0.97199 1.03987 1.23114 0.99514 0.92714 1.04222 1.21870 0.96173 0.83604 0.73946 1.92995 1.92543 1.55540 1.76896 1.93075 1.96123 1.95528 1.32038 1.23359 0.94087 0.95636 1.04977 1.22814 1.00536 0.96458 0.82060 1.21775 0.96048 0.95219 0.94602 1.21876 0.96661 1.00950 0.99717 1.20662 0.93761 0.93033 0.88555 1.42410 1.57393 1.12701 1.24984 1.19225 1.20397 0.95687 1.01724 0.91296 1.24694 1.01032 0.96067 0.98878 1.69646 1.48987 1.08330 1.31028 0.86172 0.80463 0.78437 0.81447 1.20635 1.21888 1.21848 0.92088 0.91772 0.93036 0.90339 0.91279 0.88849 0.89796 0.88445 0.88721 0.88294 0.87857 0.91067 0.88515 0.93076 0.91251 0.92130 0.96411 0.96051 0.78139 0.93531 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.36 7.93 37.16 0.29 -1.06 16 2 C -0.10 -1.17 3.30 -89.22 -0.29 -1.46 16 3 H 0.08 1.02 7.71 -51.93 -0.40 0.62 16 4 C 0.11 1.35 6.57 -2.41 -0.02 1.33 16 5 N -0.62 -8.57 3.31 -169.05 -0.56 -9.13 16 6 C 0.55 8.18 6.98 -10.99 -0.08 8.10 16 7 O -0.55 -9.37 16.09 5.56 0.09 -9.28 16 8 C -0.11 -1.53 2.90 -90.11 -0.26 -1.79 16 9 H 0.11 1.70 6.50 -51.92 -0.34 1.37 16 10 C -0.11 -1.31 6.33 -25.61 -0.16 -1.48 16 11 C -0.16 -1.72 6.41 -25.61 -0.16 -1.88 16 12 C 0.28 3.59 2.49 -24.99 -0.06 3.52 16 13 F -0.20 -2.64 17.17 2.25 0.04 -2.60 16 14 F -0.19 -2.87 17.17 2.25 0.04 -2.84 16 15 C -0.14 -1.72 5.92 -24.65 -0.15 -1.86 16 16 C 0.10 1.46 5.82 -2.19 -0.01 1.45 16 17 C -0.08 -1.07 0.73 -152.89 -0.11 -1.18 16 18 C -0.13 -1.83 7.11 37.16 0.26 -1.57 16 19 C 0.17 3.11 4.96 -4.04 -0.02 3.09 16 20 N -0.73 -16.88 4.80 -59.91 -0.29 -17.17 16 21 C -0.24 -6.36 9.99 -15.06 -0.15 -6.51 16 22 H 0.07 1.82 7.83 -52.49 -0.41 1.41 16 23 C -0.01 -0.29 5.50 -17.43 -0.10 -0.39 16 24 N -0.93 -26.92 13.06 55.49 0.72 -26.19 16 25 Si 0.90 21.92 29.55 -169.99 -5.02 16.89 16 26 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 27 H -0.29 -7.14 7.11 56.52 0.40 -6.73 16 28 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 29 H 0.06 0.55 6.62 -51.93 -0.34 0.21 16 30 H 0.06 0.63 6.99 -51.93 -0.36 0.27 16 31 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 32 H 0.08 0.99 7.93 -51.93 -0.41 0.58 16 33 H 0.07 0.75 7.86 -51.93 -0.41 0.34 16 34 H 0.09 1.16 6.91 -51.93 -0.36 0.80 16 35 H 0.08 1.00 8.14 -51.93 -0.42 0.58 16 36 H 0.10 0.91 8.11 -51.93 -0.42 0.49 16 37 H 0.09 0.97 8.12 -51.92 -0.42 0.55 16 38 H 0.10 1.14 8.14 -51.93 -0.42 0.72 16 39 H 0.10 1.18 8.05 -51.93 -0.42 0.76 16 40 H 0.07 0.89 7.84 -51.93 -0.41 0.49 16 41 H 0.10 1.58 5.55 -51.93 -0.29 1.29 16 42 H 0.05 0.58 6.68 -51.93 -0.35 0.23 16 43 H 0.07 1.13 6.74 -51.93 -0.35 0.78 16 44 H 0.06 0.81 6.89 -51.93 -0.36 0.45 16 45 H 0.02 0.35 8.14 -51.93 -0.42 -0.07 16 46 H 0.02 0.41 8.14 -51.93 -0.42 -0.01 16 47 H 0.38 9.20 5.99 -40.82 -0.24 8.96 16 48 H 0.25 7.19 8.31 -40.82 -0.34 6.86 16 LS Contribution 376.77 15.07 5.68 5.68 Total: -1.00 -30.53 376.77 -7.86 -38.39 By element: Atomic # 1 Polarization: 15.48 SS G_CDS: -7.54 Total: 7.94 kcal Atomic # 6 Polarization: -0.68 SS G_CDS: -1.02 Total: -1.69 kcal Atomic # 7 Polarization: -52.36 SS G_CDS: -0.12 Total: -52.49 kcal Atomic # 8 Polarization: -9.37 SS G_CDS: 0.09 Total: -9.28 kcal Atomic # 9 Polarization: -5.51 SS G_CDS: 0.08 Total: -5.44 kcal Atomic # 14 Polarization: 21.92 SS G_CDS: -5.02 Total: 16.89 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -30.53 -7.86 -38.39 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001181694279.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.570 kcal (2) G-P(sol) polarization free energy of solvation -30.534 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.856 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.390 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.960 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds