Wall clock time and date at job start Tue Mar 31 2020 16:09:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08997 * 109.47006 * 2 1 4 4 C 1.52994 * 109.46973 * 240.00336 * 2 1 3 5 5 N 1.46499 * 109.47159 * 183.67929 * 4 2 1 6 6 C 1.34772 * 120.00293 * 184.68649 * 5 4 2 7 7 O 1.21581 * 120.00295 * 359.97438 * 6 5 4 8 8 C 1.47650 * 120.00240 * 179.97438 * 6 5 4 9 9 C 1.40011 * 119.89299 * 359.72609 * 8 6 5 10 10 C 1.36312 * 120.10498 * 179.71878 * 9 8 6 11 11 C 1.40885 * 119.89204 * 0.57603 * 10 9 8 12 12 C 1.41110 * 120.10425 * 179.67614 * 11 10 9 13 13 H 1.08000 * 119.99855 * 208.55248 * 12 11 10 14 14 C 1.40223 * 119.99920 * 28.55591 * 12 11 10 15 15 N 1.30645 * 120.00188 * 11.47300 * 14 12 11 16 16 Si 1.86801 * 119.99804 * 191.46874 * 14 12 11 17 17 H 1.48500 * 109.47121 * 60.00161 * 16 14 12 18 18 H 1.48504 * 109.47322 * 180.02562 * 16 14 12 19 19 H 1.48500 * 109.47567 * 299.99745 * 16 14 12 20 20 C 1.40888 * 119.79347 * 359.69712 * 11 10 9 21 21 C 1.36315 * 119.88994 * 359.97438 * 20 11 10 22 22 N 1.46894 * 109.47025 * 120.00207 * 2 1 3 23 23 C 1.46849 * 111.00113 * 59.31435 * 22 2 1 24 24 C 1.53040 * 109.52472 * 174.16027 * 23 22 2 25 25 C 1.53117 * 109.27800 * 59.17850 * 24 23 22 26 26 C 1.53000 * 109.52480 * 182.44024 * 25 24 23 27 27 C 1.53118 * 109.16237 * 302.34925 * 25 24 23 28 28 C 1.46850 * 111.00100 * 295.10757 * 22 2 1 29 29 H 1.09003 * 109.47376 * 59.99719 * 1 2 3 30 30 H 1.09001 * 109.46989 * 179.97438 * 1 2 3 31 31 H 1.08994 * 109.47107 * 299.99555 * 1 2 3 32 32 H 1.08999 * 109.47393 * 303.67612 * 4 2 1 33 33 H 1.08997 * 109.47437 * 63.67751 * 4 2 1 34 34 H 0.97007 * 120.00099 * 4.68126 * 5 4 2 35 35 H 1.08010 * 119.94640 * 359.97438 * 9 8 6 36 36 H 1.08006 * 120.05704 * 180.24581 * 10 9 8 37 37 H 0.97004 * 119.99772 * 180.02562 * 15 14 12 38 38 H 1.08000 * 120.05138 * 179.97438 * 20 11 10 39 39 H 1.07999 * 119.94821 * 180.02562 * 21 20 11 40 40 H 1.08996 * 109.46117 * 54.14525 * 23 22 2 41 41 H 1.09001 * 109.46410 * 294.17400 * 23 22 2 42 42 H 1.09006 * 109.50394 * 299.24258 * 24 23 22 43 43 H 1.08998 * 109.50435 * 179.12159 * 24 23 22 44 44 H 1.09003 * 109.52140 * 62.25432 * 25 24 23 45 45 H 1.09006 * 109.47012 * 60.00247 * 26 25 24 46 46 H 1.08993 * 109.47611 * 179.97438 * 26 25 24 47 47 H 1.09002 * 109.46994 * 300.00425 * 26 25 24 48 48 H 1.09000 * 109.50428 * 177.59963 * 27 25 24 49 49 H 1.09005 * 109.50258 * 297.70821 * 27 25 24 50 50 H 1.09005 * 109.45706 * 305.85289 * 28 22 2 51 51 H 1.08999 * 109.46369 * 65.82090 * 28 22 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0400 -0.7212 -1.2492 5 7 3.5023 -0.7984 -1.2058 6 6 4.1814 -1.3104 -2.2512 7 8 3.5806 -1.7086 -3.2303 8 6 5.6553 -1.3877 -2.2077 9 6 6.3454 -0.9233 -1.0815 10 6 7.7057 -0.9978 -1.0343 11 6 8.4179 -1.5322 -2.1261 12 6 9.8265 -1.6052 -2.0848 13 1 10.3965 -1.5613 -3.0011 14 6 10.4860 -1.7349 -0.8542 15 7 9.8052 -2.0123 0.2258 16 14 12.3381 -1.5111 -0.7591 17 1 12.6956 -0.1439 -1.2154 18 1 12.7881 -1.6987 0.6437 19 1 13.0033 -2.5133 -1.6298 20 6 7.7193 -1.9930 -3.2595 21 6 6.3586 -1.9205 -3.2948 22 7 2.0197 -0.6925 1.1994 23 6 1.5354 -2.0782 1.2415 24 6 2.1797 -2.8095 2.4214 25 6 1.8221 -2.0844 3.7218 26 6 2.5131 -2.7753 4.8991 27 6 2.2942 -0.6306 3.6327 28 6 1.6466 0.0375 2.4177 29 1 -0.3634 0.5139 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 1.6238 -1.7280 -1.2829 33 1 1.7315 -0.1707 -2.1380 34 1 3.9818 -0.4810 -0.4245 35 1 5.7988 -0.5090 -0.2471 36 1 8.2370 -0.6429 -0.1635 37 1 10.2615 -2.1016 1.0772 38 1 8.2611 -2.4031 -4.0990 39 1 5.8221 -2.2739 -4.1629 40 1 1.8000 -2.5837 0.3128 41 1 0.4520 -2.0809 1.3605 42 1 3.2625 -2.8192 2.2962 43 1 1.8082 -3.8335 2.4617 44 1 0.7421 -2.1085 3.8670 45 1 3.5930 -2.7478 4.7536 46 1 2.2583 -2.2583 5.8242 47 1 2.1806 -3.8117 4.9582 48 1 2.0046 -0.0978 4.5385 49 1 3.3788 -0.6060 3.5266 50 1 1.9920 1.0687 2.3432 51 1 0.5626 0.0249 2.5311 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000270256538.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:09:21 Heat of formation + Delta-G solvation = -37.603845 kcal Electronic energy + Delta-G solvation = -28591.149509 eV Core-core repulsion = 24874.780207 eV Total energy + Delta-G solvation = -3716.369302 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.205 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -39.95251 -38.79033 -37.08664 -36.04848 -33.76841 -33.47284 -31.18515 -30.91696 -29.99744 -29.37681 -27.36523 -26.76285 -25.17174 -23.45329 -22.71067 -21.73126 -20.90891 -20.47170 -19.42259 -19.29696 -17.45409 -16.77893 -16.44310 -15.63839 -15.33974 -14.92662 -14.83539 -14.57900 -14.39622 -14.15194 -13.93914 -13.71357 -13.30423 -13.13900 -12.94604 -12.82521 -12.59890 -12.52619 -12.31243 -11.99602 -11.90980 -11.82919 -11.79686 -11.57850 -11.34491 -11.30464 -11.20138 -10.94218 -10.84817 -10.75489 -10.55897 -10.36850 -10.25297 -9.97124 -9.47444 -9.35064 -8.89565 -8.47451 -8.33518 -7.64900 -7.42654 -6.91535 -4.55316 2.30385 2.97998 2.98478 3.01667 3.09101 3.65269 3.79866 3.96770 4.02266 4.57897 4.64379 4.66222 4.68316 4.73731 4.97955 5.12746 5.15941 5.16072 5.26410 5.37789 5.46952 5.51954 5.53846 5.56257 5.59943 5.63060 5.71087 5.75514 5.83159 5.85548 5.94891 6.01487 6.05794 6.09596 6.12396 6.14741 6.24451 6.36379 6.37680 6.83247 6.90481 6.95317 7.02402 7.06588 7.18396 7.20630 7.51315 7.72521 7.87283 7.92449 8.14643 8.40495 8.47664 8.70371 8.81724 9.18725 10.00159 Molecular weight = 330.20amu Principal moments of inertia in cm(-1) A = 0.011442 B = 0.003114 C = 0.002595 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2446.515075 B = 8989.323623 C =10788.513635 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.183 4.183 2 C 0.068 3.932 3 H 0.089 0.911 4 C 0.133 3.867 5 N -0.729 5.729 6 C 0.569 3.431 7 O -0.582 6.582 8 C -0.276 4.276 9 C -0.063 4.063 10 C -0.172 4.172 11 C 0.129 3.871 12 C -0.448 4.448 13 H 0.082 0.918 14 C 0.073 3.927 15 N -0.781 5.781 16 Si 0.915 3.085 17 H -0.262 1.262 18 H -0.276 1.276 19 H -0.263 1.263 20 C -0.236 4.236 21 C -0.026 4.026 22 N -0.527 5.527 23 C 0.051 3.949 24 C -0.113 4.113 25 C -0.092 4.092 26 C -0.147 4.147 27 C -0.112 4.112 28 C 0.056 3.944 29 H 0.064 0.936 30 H 0.060 0.940 31 H 0.059 0.941 32 H 0.058 0.942 33 H 0.065 0.935 34 H 0.405 0.595 35 H 0.091 0.909 36 H 0.122 0.878 37 H 0.285 0.715 38 H 0.097 0.903 39 H 0.100 0.900 40 H 0.080 0.920 41 H 0.033 0.967 42 H 0.075 0.925 43 H 0.063 0.937 44 H 0.062 0.938 45 H 0.058 0.942 46 H 0.051 0.949 47 H 0.052 0.948 48 H 0.063 0.937 49 H 0.074 0.926 50 H 0.073 0.927 51 H 0.033 0.967 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.003 3.248 9.787 17.390 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.242 4.242 2 C -0.041 4.041 3 H 0.107 0.893 4 C 0.008 3.992 5 N -0.382 5.382 6 C 0.363 3.637 7 O -0.464 6.464 8 C -0.280 4.280 9 C -0.082 4.082 10 C -0.191 4.191 11 C 0.126 3.874 12 C -0.477 4.477 13 H 0.100 0.900 14 C -0.147 4.147 15 N -0.406 5.406 16 Si 0.739 3.261 17 H -0.186 1.186 18 H -0.201 1.201 19 H -0.188 1.188 20 C -0.256 4.256 21 C -0.046 4.046 22 N -0.252 5.252 23 C -0.076 4.076 24 C -0.151 4.151 25 C -0.111 4.111 26 C -0.204 4.204 27 C -0.150 4.150 28 C -0.072 4.072 29 H 0.083 0.917 30 H 0.079 0.921 31 H 0.078 0.922 32 H 0.076 0.924 33 H 0.084 0.916 34 H 0.242 0.758 35 H 0.109 0.891 36 H 0.139 0.861 37 H 0.096 0.904 38 H 0.116 0.884 39 H 0.118 0.882 40 H 0.099 0.901 41 H 0.051 0.949 42 H 0.094 0.906 43 H 0.082 0.918 44 H 0.080 0.920 45 H 0.077 0.923 46 H 0.070 0.930 47 H 0.071 0.929 48 H 0.081 0.919 49 H 0.093 0.907 50 H 0.092 0.908 51 H 0.051 0.949 Dipole moment (debyes) X Y Z Total from point charges -13.890 2.903 9.354 16.996 hybrid contribution 0.076 0.172 0.640 0.667 sum -13.814 3.075 9.995 17.325 Atomic orbital electron populations 1.22379 0.96816 1.02548 1.02489 1.21983 0.93139 0.98766 0.90166 0.89284 1.21207 0.82217 0.99903 0.95922 1.45745 1.05814 1.65928 1.20726 1.18597 0.88134 0.75580 0.81339 1.90621 1.71119 1.50967 1.33733 1.18959 0.90162 1.19605 0.99311 1.20527 0.94912 0.97766 0.94997 1.21019 0.92513 1.04647 1.00970 1.17792 0.93297 0.85673 0.90616 1.19774 0.91948 1.42361 0.93574 0.89971 1.26044 1.01484 0.92080 0.95047 1.69713 1.38674 1.31743 1.00423 0.86251 0.81399 0.80229 0.78254 1.18619 1.20129 1.18789 1.20762 0.93230 1.10523 1.01061 1.20368 0.93824 0.94686 0.95685 1.62069 1.59540 1.02138 1.01415 1.22158 0.96721 0.89054 0.99709 1.21659 1.02226 0.98020 0.93166 1.21165 0.99496 0.95232 0.95180 1.21814 1.01094 1.00067 0.97430 1.21657 1.01779 0.94986 0.96589 1.22084 0.97610 0.97693 0.89832 0.91681 0.92080 0.92185 0.92410 0.91627 0.75826 0.89085 0.86064 0.90388 0.88450 0.88190 0.90141 0.94904 0.90597 0.91802 0.91989 0.92291 0.92980 0.92870 0.91856 0.90709 0.90848 0.94912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.61 8.50 37.16 0.32 -1.29 16 2 C 0.07 0.73 2.51 -67.72 -0.17 0.56 16 3 H 0.09 0.93 8.08 -51.93 -0.42 0.51 16 4 C 0.13 1.85 4.72 -4.05 -0.02 1.83 16 5 N -0.73 -12.42 5.37 -61.32 -0.33 -12.75 16 6 C 0.57 12.31 7.76 -12.42 -0.10 12.21 16 7 O -0.58 -14.06 16.32 5.29 0.09 -13.98 16 8 C -0.28 -6.41 5.89 -104.73 -0.62 -7.03 16 9 C -0.06 -1.42 9.47 -39.61 -0.38 -1.79 16 10 C -0.17 -4.28 8.60 -39.27 -0.34 -4.61 16 11 C 0.13 3.34 5.55 -106.80 -0.59 2.75 16 12 C -0.45 -11.33 9.05 -37.75 -0.34 -11.67 16 13 H 0.08 1.98 7.88 -52.49 -0.41 1.57 16 14 C 0.07 1.74 5.24 -17.31 -0.09 1.65 16 15 N -0.78 -19.05 10.85 55.56 0.60 -18.44 16 16 Si 0.91 17.64 29.58 -169.99 -5.03 12.61 16 17 H -0.26 -5.00 7.11 56.52 0.40 -4.60 16 18 H -0.28 -5.18 7.11 56.52 0.40 -4.78 16 19 H -0.26 -5.05 7.11 56.52 0.40 -4.65 16 20 C -0.24 -5.81 9.73 -39.27 -0.38 -6.20 16 21 C -0.03 -0.63 9.52 -39.61 -0.38 -1.01 16 22 N -0.53 -5.72 4.09 -226.69 -0.93 -6.64 16 23 C 0.05 0.56 4.63 -3.83 -0.02 0.54 16 24 C -0.11 -1.19 5.38 -26.65 -0.14 -1.34 16 25 C -0.09 -0.84 2.79 -90.50 -0.25 -1.09 16 26 C -0.15 -1.26 9.20 37.16 0.34 -0.92 16 27 C -0.11 -1.02 5.38 -26.65 -0.14 -1.17 16 28 C 0.06 0.51 5.02 -3.83 -0.02 0.50 16 29 H 0.06 0.53 8.14 -51.93 -0.42 0.11 16 30 H 0.06 0.55 6.53 -51.93 -0.34 0.21 16 31 H 0.06 0.48 6.65 -51.93 -0.35 0.13 16 32 H 0.06 0.85 6.49 -51.93 -0.34 0.51 16 33 H 0.07 0.95 8.14 -51.93 -0.42 0.53 16 34 H 0.41 6.56 6.12 -40.82 -0.25 6.31 16 35 H 0.09 1.79 6.37 -52.48 -0.33 1.45 16 36 H 0.12 3.06 6.21 -52.48 -0.33 2.73 16 37 H 0.28 6.30 8.29 -40.82 -0.34 5.96 16 38 H 0.10 2.24 8.06 -52.49 -0.42 1.82 16 39 H 0.10 2.33 7.63 -52.49 -0.40 1.93 16 40 H 0.08 1.03 6.11 -51.93 -0.32 0.71 16 41 H 0.03 0.33 6.62 -51.93 -0.34 -0.01 16 42 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 43 H 0.06 0.63 8.14 -51.93 -0.42 0.20 16 44 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 45 H 0.06 0.55 8.14 -51.93 -0.42 0.13 16 46 H 0.05 0.40 8.14 -51.93 -0.42 -0.02 16 47 H 0.05 0.43 8.14 -51.93 -0.42 0.01 16 48 H 0.06 0.50 8.14 -51.93 -0.42 0.08 16 49 H 0.07 0.79 8.14 -51.93 -0.42 0.36 16 50 H 0.07 0.65 8.08 -51.93 -0.42 0.23 16 51 H 0.03 0.29 6.73 -51.93 -0.35 -0.06 16 LS Contribution 393.73 15.07 5.93 5.93 Total: -1.00 -27.98 393.73 -11.36 -39.34 By element: Atomic # 1 Polarization: 20.40 SS G_CDS: -8.38 Total: 12.02 kcal Atomic # 6 Polarization: -14.76 SS G_CDS: -3.32 Total: -18.08 kcal Atomic # 7 Polarization: -37.19 SS G_CDS: -0.65 Total: -37.84 kcal Atomic # 8 Polarization: -14.06 SS G_CDS: 0.09 Total: -13.98 kcal Atomic # 14 Polarization: 17.64 SS G_CDS: -5.03 Total: 12.61 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -27.98 -11.36 -39.34 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000270256538.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.734 kcal (2) G-P(sol) polarization free energy of solvation -27.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.246 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.338 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.604 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds