Wall clock time and date at job start Tue Mar 31 2020 15:49:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53005 * 109.46919 * 2 1 4 4 C 1.53003 * 109.47356 * 119.99763 * 2 1 3 5 5 C 1.53005 * 109.46914 * 60.00234 * 4 2 1 6 6 C 1.52999 * 109.47063 * 59.99929 * 5 4 2 7 7 C 1.52999 * 109.47405 * 300.00179 * 6 5 4 8 8 H 1.09000 * 109.46854 * 300.00121 * 7 6 5 9 9 C 1.50698 * 109.47506 * 180.02562 * 7 6 5 10 10 O 1.21279 * 120.00226 * 255.96275 * 9 7 6 11 11 N 1.34776 * 120.00320 * 75.95662 * 9 7 6 12 12 C 1.46510 * 119.99642 * 4.74189 * 11 9 7 13 13 C 1.50697 * 109.46998 * 83.73002 * 12 11 9 14 14 H 1.08004 * 120.00391 * 359.97438 * 13 12 11 15 15 C 1.37883 * 119.99868 * 179.97438 * 13 12 11 16 16 N 1.31514 * 119.99894 * 0.02562 * 15 13 12 17 17 Si 1.86802 * 119.99834 * 179.97438 * 15 13 12 18 18 H 1.48496 * 109.47298 * 0.02562 * 17 15 13 19 19 H 1.48500 * 109.46832 * 120.00072 * 17 15 13 20 20 H 1.48495 * 109.46900 * 239.99966 * 17 15 13 21 21 C 1.46490 * 120.00335 * 184.74163 * 11 9 7 22 22 C 1.50700 * 109.47201 * 90.00103 * 21 11 9 23 23 C 1.38229 * 119.61877 * 95.00520 * 22 21 11 24 24 C 1.38627 * 119.16294 * 179.97438 * 23 22 21 25 25 C 1.38676 * 118.41746 * 359.97438 * 24 23 22 26 26 C 1.38176 * 119.16629 * 0.02562 * 25 24 23 27 27 N 1.31853 * 119.61694 * 274.72342 * 22 21 11 28 28 C 1.52999 * 109.47168 * 240.00169 * 2 1 3 29 29 H 1.08996 * 109.47110 * 60.00356 * 1 2 3 30 30 H 1.08999 * 109.47211 * 299.99827 * 1 2 3 31 31 H 1.09004 * 109.46895 * 180.02562 * 1 2 3 32 32 H 1.08999 * 109.47038 * 60.00067 * 3 2 1 33 33 H 1.09000 * 109.47040 * 180.02562 * 3 2 1 34 34 H 1.08996 * 109.46939 * 299.99749 * 3 2 1 35 35 H 1.09000 * 109.47189 * 180.02562 * 4 2 1 36 36 H 1.08999 * 109.47295 * 300.00358 * 4 2 1 37 37 H 1.08994 * 109.47275 * 179.97438 * 5 4 2 38 38 H 1.09000 * 109.47040 * 299.99904 * 5 4 2 39 39 H 1.09000 * 109.47213 * 60.00081 * 6 5 4 40 40 H 1.09004 * 109.47017 * 179.97438 * 6 5 4 41 41 H 1.09001 * 109.46881 * 203.72956 * 12 11 9 42 42 H 1.08999 * 109.46974 * 323.73212 * 12 11 9 43 43 H 0.96996 * 120.00130 * 179.97438 * 16 15 13 44 44 H 1.09007 * 109.47112 * 209.99856 * 21 11 9 45 45 H 1.09001 * 109.47211 * 329.99562 * 21 11 9 46 46 H 1.08005 * 120.42128 * 359.94633 * 23 22 21 47 47 H 1.08002 * 120.79121 * 179.97438 * 24 23 22 48 48 H 1.08002 * 120.41447 * 179.97438 * 25 24 23 49 49 H 1.07994 * 119.62121 * 179.97438 * 26 25 24 50 50 H 1.08996 * 109.47533 * 59.99735 * 28 2 1 51 51 H 1.09009 * 109.47090 * 179.97438 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7212 1.2493 5 6 1.5301 -2.1638 1.2493 6 6 2.0401 -2.8850 0.0000 7 6 1.5301 -2.1638 -1.2492 8 1 0.4401 -2.1638 -1.2492 9 6 2.0319 -2.8745 -2.4797 10 8 2.9459 -2.4026 -3.1222 11 7 1.4651 -4.0345 -2.8662 12 6 0.2950 -4.5517 -2.1521 13 6 -0.9516 -3.8986 -2.6912 14 1 -0.8795 -3.1708 -3.4859 15 6 -2.1842 -4.2303 -2.1699 16 7 -2.2719 -5.1161 -1.2018 17 14 -3.7293 -3.4202 -2.8376 18 1 -3.3622 -2.4667 -3.9152 19 1 -4.6362 -4.4606 -3.3857 20 1 -4.4178 -2.6900 -1.7432 21 6 2.0189 -4.7783 -4.0002 22 6 3.0631 -5.7455 -3.5049 23 6 2.7101 -7.0554 -3.2399 24 6 3.6783 -7.9371 -2.7852 25 6 4.9714 -7.4663 -2.6136 26 6 5.2498 -6.1434 -2.8991 27 7 4.3040 -5.3337 -3.3346 28 6 2.0400 -0.7212 -1.2493 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 1.6766 1.9564 0.8900 33 1 3.1299 1.4426 -0.0005 34 1 1.6766 1.9563 -0.8900 35 1 3.1300 -0.7208 1.2495 36 1 1.6767 -0.2074 2.1393 37 1 1.8938 -2.6777 2.1390 38 1 0.4401 -2.1638 1.2493 39 1 3.1301 -2.8849 0.0000 40 1 1.6771 -3.9128 0.0003 41 1 0.2304 -5.6305 -2.2939 42 1 0.3907 -4.3299 -1.0892 43 1 -3.1390 -5.3492 -0.8348 44 1 1.2207 -5.3290 -4.4982 45 1 2.4737 -4.0817 -4.7044 46 1 1.6927 -7.3877 -3.3849 47 1 3.4315 -8.9662 -2.5696 48 1 5.7509 -8.1253 -2.2605 49 1 6.2542 -5.7689 -2.7678 50 1 1.6767 -0.2075 -2.1392 51 1 3.1301 -0.7208 -1.2495 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000330442205.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:49:36 Heat of formation + Delta-G solvation = -29.080064 kcal Electronic energy + Delta-G solvation = -30080.189123 eV Core-core repulsion = 26364.189440 eV Total energy + Delta-G solvation = -3715.999683 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 330.205 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -40.17821 -39.64719 -37.91133 -35.04205 -33.16100 -32.71164 -32.16756 -31.35449 -30.43139 -27.62014 -27.03703 -26.29289 -25.86961 -23.44752 -23.20793 -22.61344 -21.56780 -20.96136 -18.27022 -17.96852 -16.81337 -16.54567 -16.05455 -15.80116 -15.51179 -15.26454 -14.67638 -14.44892 -14.37781 -14.12015 -13.90885 -13.44238 -13.26834 -13.17047 -12.90331 -12.57175 -12.47450 -12.21859 -12.09941 -11.73724 -11.68423 -11.57814 -11.42421 -11.33738 -11.14149 -11.07851 -10.88746 -10.69768 -10.60942 -10.50978 -10.21368 -10.00862 -9.76511 -9.68463 -9.65423 -9.60693 -9.11759 -8.94735 -8.66236 -8.48604 -7.67768 -6.19476 -4.26316 1.30776 1.52395 3.20245 3.29603 3.33943 3.55776 3.82847 4.28136 4.36677 4.62084 4.95129 4.97526 5.01013 5.02432 5.07381 5.13548 5.25793 5.36310 5.42512 5.51920 5.60722 5.70007 5.74693 5.79577 5.81953 5.88552 5.91429 5.97417 5.99230 6.02376 6.10917 6.16586 6.22018 6.25711 6.31488 6.33268 6.36589 6.41617 6.47463 6.55087 6.62522 6.64154 6.68514 6.76487 6.79402 6.92971 7.00894 7.24935 7.58083 7.76900 8.06644 8.31143 8.41525 8.81500 9.16572 9.42067 10.86784 Molecular weight = 330.20amu Principal moments of inertia in cm(-1) A = 0.008121 B = 0.005629 C = 0.003837 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3447.011704 B = 4973.270735 C = 7295.378150 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.065 4.065 3 C -0.138 4.138 4 C -0.105 4.105 5 C -0.118 4.118 6 C -0.104 4.104 7 C -0.105 4.105 8 H 0.115 0.885 9 C 0.526 3.474 10 O -0.558 6.558 11 N -0.594 5.594 12 C 0.235 3.765 13 C -0.535 4.535 14 H 0.062 0.938 15 C 0.067 3.933 16 N -0.890 5.890 17 Si 0.891 3.109 18 H -0.272 1.272 19 H -0.283 1.283 20 H -0.282 1.282 21 C 0.165 3.835 22 C 0.122 3.878 23 C -0.157 4.157 24 C -0.080 4.080 25 C -0.183 4.183 26 C 0.092 3.908 27 N -0.460 5.460 28 C -0.083 4.083 29 H 0.052 0.948 30 H 0.048 0.952 31 H 0.070 0.930 32 H 0.050 0.950 33 H 0.051 0.949 34 H 0.053 0.947 35 H 0.057 0.943 36 H 0.057 0.943 37 H 0.057 0.943 38 H 0.071 0.929 39 H 0.055 0.945 40 H 0.071 0.929 41 H 0.033 0.967 42 H 0.044 0.956 43 H 0.264 0.736 44 H 0.092 0.908 45 H 0.090 0.910 46 H 0.137 0.863 47 H 0.130 0.870 48 H 0.128 0.872 49 H 0.149 0.851 50 H 0.061 0.939 51 H 0.064 0.936 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.919 0.502 3.024 9.432 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.205 4.205 2 C -0.065 4.065 3 C -0.195 4.195 4 C -0.143 4.143 5 C -0.155 4.155 6 C -0.141 4.141 7 C -0.126 4.126 8 H 0.133 0.867 9 C 0.314 3.686 10 O -0.437 6.437 11 N -0.325 5.325 12 C 0.115 3.885 13 C -0.574 4.574 14 H 0.080 0.920 15 C -0.136 4.136 16 N -0.528 5.528 17 Si 0.719 3.281 18 H -0.196 1.196 19 H -0.209 1.209 20 H -0.208 1.208 21 C 0.041 3.959 22 C -0.017 4.017 23 C -0.177 4.177 24 C -0.106 4.106 25 C -0.203 4.203 26 C -0.065 4.065 27 N -0.169 5.169 28 C -0.121 4.121 29 H 0.071 0.929 30 H 0.067 0.933 31 H 0.089 0.911 32 H 0.069 0.931 33 H 0.070 0.930 34 H 0.072 0.928 35 H 0.076 0.924 36 H 0.075 0.925 37 H 0.076 0.924 38 H 0.090 0.910 39 H 0.073 0.927 40 H 0.089 0.911 41 H 0.051 0.949 42 H 0.062 0.938 43 H 0.074 0.926 44 H 0.110 0.890 45 H 0.108 0.892 46 H 0.155 0.845 47 H 0.148 0.852 48 H 0.146 0.854 49 H 0.166 0.834 50 H 0.079 0.921 51 H 0.083 0.917 Dipole moment (debyes) X Y Z Total from point charges 9.443 1.529 2.613 9.917 hybrid contribution -1.244 -0.819 -0.025 1.489 sum 8.199 0.710 2.588 8.627 Atomic orbital electron populations 1.22002 0.94474 1.02979 1.01002 1.20542 0.95882 0.94647 0.95408 1.21838 1.00676 0.95754 1.01275 1.21581 1.00140 0.95663 0.96884 1.21550 1.01662 0.95105 0.97208 1.21448 0.99947 0.99568 0.93180 1.21321 1.03894 0.94740 0.92648 0.86747 1.20514 0.81608 0.80538 0.85929 1.90597 1.30479 1.66221 1.56365 1.48145 1.30875 1.21639 1.31871 1.19540 0.81056 0.95124 0.92777 1.21556 0.90928 1.24627 1.20305 0.92016 1.24908 0.98961 0.94933 0.94789 1.69929 1.25078 1.32039 1.25761 0.86533 0.82993 0.79453 0.79118 1.19603 1.20918 1.20790 1.20108 0.92929 0.93151 0.89760 1.21936 0.92189 0.92873 0.94690 1.22112 1.00824 0.94465 1.00311 1.21539 0.92981 0.99905 0.96218 1.22077 0.97564 0.97597 1.03065 1.22754 0.98588 0.90149 0.95050 1.67649 1.00879 1.37412 1.10972 1.21353 1.00683 0.93558 0.96516 0.92860 0.93331 0.91086 0.93065 0.92954 0.92804 0.92379 0.92473 0.92390 0.91018 0.92660 0.91077 0.94920 0.93825 0.92637 0.89024 0.89167 0.84545 0.85169 0.85379 0.83351 0.92060 0.91691 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -2.16 7.78 37.16 0.29 -1.87 16 2 C -0.06 -0.91 0.77 -154.51 -0.12 -1.03 16 3 C -0.14 -1.69 8.47 37.16 0.31 -1.37 16 4 C -0.11 -1.40 4.73 -26.73 -0.13 -1.53 16 5 C -0.12 -1.74 5.65 -26.73 -0.15 -1.89 16 6 C -0.10 -1.79 4.92 -26.73 -0.13 -1.93 16 7 C -0.11 -1.99 1.41 -91.77 -0.13 -2.12 16 8 H 0.11 2.37 4.99 -51.93 -0.26 2.11 16 9 C 0.53 11.30 6.81 -10.99 -0.07 11.23 16 10 O -0.56 -13.10 15.56 5.56 0.09 -13.01 16 11 N -0.59 -12.58 2.46 -176.43 -0.43 -13.02 16 12 C 0.23 5.39 4.79 -5.19 -0.02 5.37 16 13 C -0.54 -13.45 8.57 -34.44 -0.30 -13.74 16 14 H 0.06 1.60 7.81 -52.48 -0.41 1.19 16 15 C 0.07 1.71 5.46 -17.82 -0.10 1.62 16 16 N -0.89 -23.61 13.29 55.43 0.74 -22.87 16 17 Si 0.89 20.11 29.54 -169.99 -5.02 15.09 16 18 H -0.27 -6.15 7.11 56.52 0.40 -5.74 16 19 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 20 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 21 C 0.17 3.16 5.72 -5.20 -0.03 3.13 16 22 C 0.12 2.18 6.36 -82.59 -0.53 1.65 16 23 C -0.16 -2.41 9.72 -39.44 -0.38 -2.80 16 24 C -0.08 -1.04 10.18 -39.28 -0.40 -1.44 16 25 C -0.18 -2.27 10.11 -39.44 -0.40 -2.67 16 26 C 0.09 1.34 11.18 -17.55 -0.20 1.15 16 27 N -0.46 -8.37 10.27 -9.48 -0.10 -8.47 16 28 C -0.08 -1.41 3.43 -26.73 -0.09 -1.50 16 29 H 0.05 0.78 8.14 -51.93 -0.42 0.35 16 30 H 0.05 0.63 8.14 -51.93 -0.42 0.20 16 31 H 0.07 1.17 4.81 -51.93 -0.25 0.92 16 32 H 0.05 0.56 8.14 -51.93 -0.42 0.14 16 33 H 0.05 0.62 8.14 -51.93 -0.42 0.19 16 34 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 35 H 0.06 0.76 8.14 -51.93 -0.42 0.34 16 36 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 37 H 0.06 0.78 8.14 -51.93 -0.42 0.35 16 38 H 0.07 1.12 6.43 -51.93 -0.33 0.79 16 39 H 0.05 0.96 8.14 -51.93 -0.42 0.54 16 40 H 0.07 1.34 6.13 -51.93 -0.32 1.02 16 41 H 0.03 0.78 8.02 -51.93 -0.42 0.37 16 42 H 0.04 1.04 4.83 -51.93 -0.25 0.79 16 43 H 0.26 6.70 8.31 -40.82 -0.34 6.36 16 44 H 0.09 1.62 7.97 -51.93 -0.41 1.21 16 45 H 0.09 1.81 7.36 -51.93 -0.38 1.42 16 46 H 0.14 1.98 8.06 -52.48 -0.42 1.56 16 47 H 0.13 1.31 8.06 -52.49 -0.42 0.89 16 48 H 0.13 1.17 8.06 -52.49 -0.42 0.75 16 49 H 0.15 1.76 8.06 -52.49 -0.42 1.34 16 50 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 51 H 0.06 1.15 7.93 -51.92 -0.41 0.73 16 LS Contribution 396.75 15.07 5.98 5.98 Total: -1.00 -29.17 396.75 -9.82 -39.00 By element: Atomic # 1 Polarization: 15.57 SS G_CDS: -8.50 Total: 7.07 kcal Atomic # 6 Polarization: -7.18 SS G_CDS: -2.57 Total: -9.75 kcal Atomic # 7 Polarization: -44.57 SS G_CDS: 0.21 Total: -44.37 kcal Atomic # 8 Polarization: -13.10 SS G_CDS: 0.09 Total: -13.01 kcal Atomic # 14 Polarization: 20.11 SS G_CDS: -5.02 Total: 15.09 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -29.17 -9.82 -39.00 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000330442205.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 9.915 kcal (2) G-P(sol) polarization free energy of solvation -29.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.821 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.080 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds