Wall clock time and date at job start Tue Mar 31 2020 16:17:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53000 * 109.47124 * 2 1 4 4 C 1.53008 * 109.46980 * 240.00439 * 2 1 3 5 5 O 1.45192 * 109.47557 * 120.00121 * 2 1 3 6 6 C 1.34639 * 116.99942 * 59.99992 * 5 2 1 7 7 O 1.21510 * 119.99809 * 0.02562 * 6 5 2 8 8 N 1.34777 * 119.99861 * 179.97438 * 6 5 2 9 9 C 1.47770 * 118.55059 * 0.02562 * 8 6 5 10 10 C 1.54029 * 111.55533 * 221.88248 * 9 8 6 11 11 N 1.44767 * 109.68024 * 39.99721 * 10 9 8 12 12 C 1.46908 * 111.00239 * 142.14015 * 11 10 9 13 13 C 1.53001 * 109.46980 * 57.94541 * 12 11 10 14 14 C 1.50701 * 109.46888 * 177.28971 * 13 12 11 15 15 H 1.07992 * 120.00190 * 359.97438 * 14 13 12 16 16 C 1.37879 * 119.99627 * 180.02562 * 14 13 12 17 17 N 1.31514 * 120.00279 * 359.97438 * 16 14 13 18 18 Si 1.86795 * 119.99681 * 179.97438 * 16 14 13 19 19 H 1.48499 * 109.47440 * 59.99764 * 18 16 14 20 20 H 1.48501 * 109.47354 * 179.97438 * 18 16 14 21 21 H 1.48501 * 109.47387 * 300.00048 * 18 16 14 22 22 C 1.46263 * 110.64114 * 265.83559 * 11 10 9 23 23 C 1.47547 * 114.37060 * 87.74678 * 22 11 10 24 24 C 1.53006 * 109.42389 * 177.70147 * 23 22 11 25 25 F 1.39898 * 109.42763 * 57.86567 * 23 22 11 26 26 C 1.44683 * 118.54410 * 179.97438 * 8 6 5 27 27 H 1.08999 * 109.46723 * 299.99348 * 1 2 3 28 28 H 1.08995 * 109.47597 * 59.99646 * 1 2 3 29 29 H 1.09002 * 109.46852 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47180 * 180.02562 * 3 2 1 31 31 H 1.09009 * 109.47342 * 300.00716 * 3 2 1 32 32 H 1.08998 * 109.47240 * 60.00072 * 3 2 1 33 33 H 1.09002 * 109.46884 * 299.99437 * 4 2 1 34 34 H 1.08995 * 109.47025 * 59.99564 * 4 2 1 35 35 H 1.08997 * 109.46898 * 179.97438 * 4 2 1 36 36 H 1.09004 * 109.06986 * 101.34614 * 9 8 6 37 37 H 1.08998 * 109.06436 * 342.41446 * 9 8 6 38 38 H 1.08997 * 109.43863 * 279.93525 * 10 9 8 39 39 H 1.09000 * 109.40436 * 160.03531 * 10 9 8 40 40 H 1.08994 * 109.46809 * 177.94508 * 12 11 10 41 41 H 1.09004 * 109.46485 * 297.94820 * 12 11 10 42 42 H 1.09007 * 109.47046 * 297.28542 * 13 12 11 43 43 H 1.08996 * 109.46885 * 57.28666 * 13 12 11 44 44 H 0.96997 * 120.00092 * 180.02562 * 17 16 14 45 45 H 1.09002 * 108.50603 * 326.47980 * 22 11 10 46 46 H 1.08997 * 108.38285 * 208.92194 * 22 11 10 47 47 H 1.08997 * 109.47159 * 59.99987 * 24 23 22 48 48 H 1.09004 * 109.46737 * 180.02562 * 24 23 22 49 49 H 1.09000 * 109.47019 * 299.99785 * 24 23 22 50 50 H 1.09004 * 109.46019 * 330.90411 * 26 8 6 51 51 H 1.08997 * 109.45847 * 210.93971 * 26 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2494 5 8 2.0141 -0.6844 1.1854 6 6 1.6523 -1.9723 1.3382 7 8 0.9517 -2.5097 0.5034 8 7 2.0683 -2.6657 2.4165 9 6 2.9197 -1.9808 3.4113 10 6 4.0669 -2.8878 3.8945 11 7 4.6008 -3.6362 2.7762 12 6 6.0604 -3.7676 2.8794 13 6 6.4186 -4.4546 4.1988 14 6 7.9110 -4.6494 4.2747 15 1 8.5409 -4.3168 3.4630 16 6 8.4721 -5.2530 5.3800 17 7 7.7049 -5.6584 6.3683 18 14 10.3219 -5.4951 5.4738 19 1 10.9981 -4.1748 5.4041 20 1 10.6696 -6.1618 6.7544 21 1 10.7688 -6.3406 4.3377 22 6 3.9618 -4.9485 2.6819 23 6 2.7196 -4.9649 1.8859 24 6 2.1803 -6.3950 1.8140 25 9 2.9895 -4.5049 0.5926 26 6 1.6604 -4.0475 2.5494 27 1 -0.3633 0.5137 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 3.1300 1.4425 -0.0005 31 1 1.6765 1.9564 -0.8900 32 1 1.6767 1.9563 0.8900 33 1 1.6767 -1.7489 -1.2493 34 1 1.6766 -0.2073 -2.1393 35 1 3.1299 -0.7208 -1.2496 36 1 2.3078 -1.6944 4.2667 37 1 3.3417 -1.0826 2.9605 38 1 3.6896 -3.5801 4.6471 39 1 4.8554 -2.2737 4.3295 40 1 6.4311 -4.3648 2.0464 41 1 6.5172 -2.7784 2.8491 42 1 6.0903 -3.8338 5.0325 43 1 5.9225 -5.4238 4.2501 44 1 8.0996 -6.0828 7.1461 45 1 3.7317 -5.2945 3.6895 46 1 4.6701 -5.6441 2.2319 47 1 1.9718 -6.7558 2.8211 48 1 1.2627 -6.4080 1.2257 49 1 2.9224 -7.0399 1.3433 50 1 0.6971 -4.1905 2.0598 51 1 1.5717 -4.2999 3.6060 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000496218861.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:17:24 Heat of formation + Delta-G solvation = -123.113090 kcal Electronic energy + Delta-G solvation = -31300.384455 eV Core-core repulsion = 27149.537970 eV Total energy + Delta-G solvation = -4150.846486 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 330.211 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -47.17943 -40.72168 -38.82737 -37.08598 -35.17157 -34.22714 -33.40443 -32.90645 -30.04670 -28.45493 -27.47527 -27.38012 -26.76839 -25.97485 -23.89525 -22.54974 -21.71417 -20.51345 -19.49028 -19.02960 -17.80768 -16.81720 -16.61914 -16.28630 -16.01474 -15.55305 -15.28905 -14.74184 -14.53229 -14.44034 -14.17514 -13.98197 -13.75154 -13.61051 -13.20957 -12.71497 -12.65422 -12.54625 -12.39862 -12.23028 -12.20616 -12.09206 -11.92250 -11.88885 -11.82012 -11.74353 -11.43707 -11.28450 -11.14845 -10.96082 -10.82059 -10.75250 -10.63906 -10.34894 -10.27079 -9.98937 -9.87736 -9.80772 -9.26149 -8.53309 -8.42678 -7.65731 -6.08824 -4.11909 2.28201 3.05795 3.28348 3.32879 3.35649 3.82751 4.24321 4.40747 4.59047 4.68656 4.70412 4.73160 4.87253 5.01847 5.12557 5.15758 5.27193 5.30839 5.32883 5.38049 5.47604 5.51857 5.58465 5.59752 5.61100 5.70760 5.72209 5.83934 5.84160 5.91464 5.99207 6.02310 6.05716 6.11395 6.22330 6.23641 6.31789 6.36355 6.56107 6.61067 6.68481 6.79714 7.37483 7.42720 7.48603 7.60792 7.77224 7.91322 8.33609 8.53992 8.94612 9.52981 11.02046 Molecular weight = 330.21amu Principal moments of inertia in cm(-1) A = 0.017067 B = 0.003228 C = 0.002963 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1640.228297 B = 8672.277736 C = 9448.853915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.181 4.181 2 C 0.136 3.864 3 C -0.140 4.140 4 C -0.182 4.182 5 O -0.360 6.360 6 C 0.657 3.343 7 O -0.569 6.569 8 N -0.573 5.573 9 C 0.120 3.880 10 C 0.043 3.957 11 N -0.529 5.529 12 C 0.062 3.938 13 C -0.007 4.007 14 C -0.522 4.522 15 H 0.056 0.944 16 C 0.059 3.941 17 N -0.895 5.895 18 Si 0.893 3.107 19 H -0.276 1.276 20 H -0.287 1.287 21 H -0.276 1.276 22 C 0.033 3.967 23 C 0.112 3.888 24 C -0.170 4.170 25 F -0.194 7.194 26 C 0.117 3.883 27 H 0.056 0.944 28 H 0.066 0.934 29 H 0.087 0.913 30 H 0.067 0.933 31 H 0.077 0.923 32 H 0.064 0.936 33 H 0.089 0.911 34 H 0.064 0.936 35 H 0.060 0.940 36 H 0.064 0.936 37 H 0.090 0.910 38 H 0.047 0.953 39 H 0.089 0.911 40 H 0.063 0.937 41 H 0.065 0.935 42 H 0.018 0.982 43 H 0.015 0.985 44 H 0.261 0.739 45 H 0.055 0.945 46 H 0.079 0.921 47 H 0.075 0.925 48 H 0.070 0.930 49 H 0.071 0.929 50 H 0.094 0.906 51 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.859 8.616 -8.779 20.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.238 4.238 2 C 0.099 3.901 3 C -0.197 4.197 4 C -0.239 4.239 5 O -0.275 6.275 6 C 0.412 3.588 7 O -0.458 6.458 8 N -0.311 5.311 9 C -0.003 4.003 10 C -0.087 4.087 11 N -0.251 5.251 12 C -0.065 4.065 13 C -0.045 4.045 14 C -0.560 4.560 15 H 0.074 0.926 16 C -0.143 4.143 17 N -0.534 5.534 18 Si 0.720 3.280 19 H -0.202 1.202 20 H -0.213 1.213 21 H -0.202 1.202 22 C -0.096 4.096 23 C 0.091 3.909 24 C -0.229 4.229 25 F -0.175 7.175 26 C -0.007 4.007 27 H 0.075 0.925 28 H 0.085 0.915 29 H 0.106 0.894 30 H 0.086 0.914 31 H 0.095 0.905 32 H 0.083 0.917 33 H 0.108 0.892 34 H 0.083 0.917 35 H 0.079 0.921 36 H 0.082 0.918 37 H 0.108 0.892 38 H 0.065 0.935 39 H 0.107 0.893 40 H 0.081 0.919 41 H 0.083 0.917 42 H 0.036 0.964 43 H 0.034 0.966 44 H 0.071 0.929 45 H 0.073 0.927 46 H 0.097 0.903 47 H 0.094 0.906 48 H 0.089 0.911 49 H 0.090 0.910 50 H 0.112 0.888 51 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -16.151 8.721 -9.347 20.598 hybrid contribution 1.397 -0.688 0.865 1.781 sum -14.755 8.032 -8.482 18.819 Atomic orbital electron populations 1.22501 0.94372 1.04919 1.02049 1.21988 0.93993 0.91471 0.82640 1.21844 1.02421 0.92717 1.02731 1.22486 1.01810 1.03529 0.96046 1.86300 1.71432 1.23947 1.45851 1.17934 0.78651 0.80406 0.81829 1.90852 1.42037 1.70449 1.42488 1.46243 1.52029 1.10732 1.22091 1.22206 0.91232 0.95931 0.90946 1.22349 0.96722 0.97541 0.92108 1.61053 1.06586 1.15547 1.41922 1.22481 0.83296 1.00788 0.99889 1.19710 0.97031 0.95768 0.92014 1.21115 0.92323 1.39015 1.03591 0.92610 1.25007 0.98099 0.95455 0.95705 1.69941 1.35153 1.40574 1.07769 0.86646 0.85598 0.78449 0.77261 1.20171 1.21296 1.20202 1.21513 0.95722 0.92577 0.99740 1.20750 0.96076 0.93895 0.80140 1.22309 1.02415 0.94618 1.03538 1.92880 1.95071 1.90375 1.39132 1.22023 0.97920 0.79112 1.01623 0.92458 0.91479 0.89408 0.91385 0.90452 0.91663 0.89198 0.91681 0.92073 0.91813 0.89194 0.93461 0.89315 0.91892 0.91686 0.96418 0.96635 0.92915 0.92671 0.90296 0.90641 0.91134 0.90985 0.88752 0.89080 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -1.95 8.37 37.16 0.31 -1.63 16 2 C 0.14 1.60 1.13 -90.62 -0.10 1.50 16 3 C -0.14 -1.25 8.85 37.16 0.33 -0.92 16 4 C -0.18 -2.22 8.37 37.16 0.31 -1.91 16 5 O -0.36 -5.15 8.39 -40.32 -0.34 -5.49 16 6 C 0.66 10.20 7.04 54.06 0.38 10.58 16 7 O -0.57 -9.61 10.80 -19.28 -0.21 -9.82 16 8 N -0.57 -8.21 2.44 -177.95 -0.43 -8.64 16 9 C 0.12 1.58 6.47 -2.81 -0.02 1.56 16 10 C 0.04 0.65 4.35 -4.43 -0.02 0.63 16 11 N -0.53 -9.23 4.32 -239.59 -1.04 -10.27 16 12 C 0.06 1.25 4.93 -3.82 -0.02 1.23 16 13 C -0.01 -0.17 4.46 -27.88 -0.12 -0.29 16 14 C -0.52 -14.27 9.11 -34.44 -0.31 -14.58 16 15 H 0.06 1.49 7.74 -52.49 -0.41 1.09 16 16 C 0.06 1.64 5.46 -17.82 -0.10 1.54 16 17 N -0.90 -26.05 13.29 55.43 0.74 -25.31 16 18 Si 0.89 21.25 29.54 -169.99 -5.02 16.23 16 19 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 20 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 21 H -0.28 -6.50 7.11 56.52 0.40 -6.10 16 22 C 0.03 0.54 2.82 -6.80 -0.02 0.52 16 23 C 0.11 1.62 1.28 -92.17 -0.12 1.50 16 24 C -0.17 -1.96 8.87 37.16 0.33 -1.63 16 25 F -0.19 -3.49 15.48 2.25 0.03 -3.46 16 26 C 0.12 1.53 4.63 -3.94 -0.02 1.51 16 27 H 0.06 0.57 8.14 -51.93 -0.42 0.15 16 28 H 0.07 0.58 8.14 -51.93 -0.42 0.16 16 29 H 0.09 1.14 5.88 -51.93 -0.31 0.84 16 30 H 0.07 0.63 8.14 -51.93 -0.42 0.21 16 31 H 0.08 0.54 8.14 -51.92 -0.42 0.11 16 32 H 0.06 0.55 8.14 -51.93 -0.42 0.12 16 33 H 0.09 1.35 5.88 -51.93 -0.31 1.04 16 34 H 0.06 0.64 8.14 -51.93 -0.42 0.21 16 35 H 0.06 0.78 8.14 -51.93 -0.42 0.36 16 36 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 37 H 0.09 1.22 6.89 -51.93 -0.36 0.86 16 38 H 0.05 0.73 7.14 -51.93 -0.37 0.36 16 39 H 0.09 1.42 7.06 -51.93 -0.37 1.05 16 40 H 0.06 1.32 7.88 -51.93 -0.41 0.91 16 41 H 0.06 1.31 8.10 -51.93 -0.42 0.89 16 42 H 0.02 0.45 6.91 -51.92 -0.36 0.09 16 43 H 0.02 0.40 7.15 -51.93 -0.37 0.03 16 44 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 45 H 0.06 0.89 6.99 -51.93 -0.36 0.52 16 46 H 0.08 1.40 7.49 -51.93 -0.39 1.01 16 47 H 0.07 0.73 8.14 -51.93 -0.42 0.31 16 48 H 0.07 0.75 8.14 -51.93 -0.42 0.33 16 49 H 0.07 0.84 8.14 -51.93 -0.42 0.42 16 50 H 0.09 1.22 7.23 -51.93 -0.38 0.85 16 51 H 0.09 1.00 8.10 -51.93 -0.42 0.58 16 LS Contribution 390.05 15.07 5.88 5.88 Total: -1.00 -31.59 390.05 -8.58 -40.17 By element: Atomic # 1 Polarization: 10.11 SS G_CDS: -9.01 Total: 1.10 kcal Atomic # 6 Polarization: -1.20 SS G_CDS: 0.81 Total: -0.39 kcal Atomic # 7 Polarization: -43.49 SS G_CDS: -0.73 Total: -44.22 kcal Atomic # 8 Polarization: -14.76 SS G_CDS: -0.55 Total: -15.31 kcal Atomic # 9 Polarization: -3.49 SS G_CDS: 0.03 Total: -3.46 kcal Atomic # 14 Polarization: 21.25 SS G_CDS: -5.02 Total: 16.23 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -31.59 -8.58 -40.17 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000496218861.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.946 kcal (2) G-P(sol) polarization free energy of solvation -31.586 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -114.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.113 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds