Wall clock time and date at job start Tue Mar 31 2020 16:31:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13594 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 N 1.46505 * 109.47419 * 93.76592 * 3 2 1 5 5 C 1.36951 * 120.00179 * 97.39225 * 4 3 2 6 6 H 1.07994 * 120.00274 * 157.78817 * 5 4 3 7 7 C 1.38993 * 119.99606 * 337.78216 * 5 4 3 8 8 N 1.31394 * 120.00514 * 356.89954 * 7 5 4 9 9 Si 1.86806 * 119.99644 * 176.89187 * 7 5 4 10 10 H 1.48504 * 109.46810 * 90.00198 * 9 7 5 11 11 H 1.48498 * 109.47066 * 210.00552 * 9 7 5 12 12 H 1.48508 * 109.47134 * 330.00579 * 9 7 5 13 13 C 1.34773 * 119.99785 * 277.39697 * 4 3 2 14 14 O 1.21624 * 120.00075 * 176.48180 * 13 4 3 15 15 C 1.47433 * 120.00054 * 356.75361 * 13 4 3 16 16 C 1.36684 * 125.77454 * 187.82377 * 15 13 4 17 17 N 1.35104 * 106.78204 * 179.97438 * 16 15 13 18 18 C 1.40215 * 126.61174 * 179.97438 * 17 16 15 19 19 C 1.38862 * 120.05947 * 180.02562 * 18 17 16 20 20 C 1.38105 * 119.95834 * 180.02562 * 19 18 17 21 21 C 1.38279 * 120.08093 * 359.97438 * 20 19 18 22 22 C 1.38375 * 120.11968 * 359.97438 * 21 20 19 23 23 Cl 1.73599 * 119.98064 * 180.02562 * 22 21 20 24 24 C 1.38260 * 120.03768 * 359.77080 * 22 21 20 25 25 N 1.40213 * 106.77447 * 359.97438 * 17 16 15 26 26 N 1.28745 * 108.40674 * 359.74942 * 25 17 16 27 27 H 1.09003 * 109.47639 * 333.76307 * 3 2 1 28 28 H 1.09003 * 109.47037 * 213.76313 * 3 2 1 29 29 H 0.97005 * 120.00270 * 179.97438 * 8 7 5 30 30 H 1.07998 * 126.61273 * 0.02562 * 16 15 13 31 31 H 1.07993 * 120.01611 * 359.97438 * 19 18 17 32 32 H 1.08000 * 119.95471 * 179.97438 * 20 19 18 33 33 H 1.08006 * 119.93811 * 180.02562 * 21 20 19 34 34 H 1.07997 * 120.04044 * 180.24953 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 7 3.0963 0.0916 -1.3783 5 6 3.4679 1.3044 -1.8945 6 1 4.1426 1.3491 -2.7365 7 6 2.9765 2.4779 -1.3347 8 7 2.1084 2.4229 -0.3499 9 14 3.5505 4.1334 -1.9823 10 1 2.6523 4.5740 -3.0798 11 1 3.5178 5.1328 -0.8844 12 1 4.9378 4.0094 -2.4976 13 6 3.1797 -1.0183 -2.1382 14 8 3.5240 -0.9343 -3.3016 15 6 2.8479 -2.3337 -1.5608 16 6 3.0333 -3.5433 -2.1696 17 7 2.6015 -4.4862 -1.3037 18 6 2.6017 -5.8732 -1.5091 19 6 2.1226 -6.7228 -0.5206 20 6 2.1242 -8.0886 -0.7250 21 6 2.6019 -8.6112 -1.9128 22 6 3.0791 -7.7675 -2.9004 23 17 3.6773 -8.4274 -4.3905 24 6 3.0748 -6.3991 -2.7032 25 7 2.1531 -3.8102 -0.1600 26 7 2.3180 -2.5467 -0.3437 27 1 2.9717 -0.9210 0.4543 28 1 2.9708 0.8552 0.5712 29 1 1.7657 3.2419 0.0410 30 1 3.4462 -3.7129 -3.1531 31 1 1.7497 -6.3157 0.4075 32 1 1.7520 -8.7493 0.0440 33 1 2.6017 -9.6797 -2.0703 34 1 3.4435 -5.7404 -3.4755 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000189270870.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:31:14 Heat of formation + Delta-G solvation = 144.133833 kcal Electronic energy + Delta-G solvation = -24444.140669 eV Core-core repulsion = 20599.895731 eV Total energy + Delta-G solvation = -3844.244938 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.058 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.24204 -39.76262 -38.52212 -36.96788 -35.72099 -34.63873 -34.25982 -31.92203 -31.51231 -30.69892 -29.85358 -27.38923 -25.47140 -24.40750 -23.73603 -22.05769 -21.62093 -19.89231 -18.55322 -17.85781 -16.93807 -16.39786 -16.15426 -15.84075 -15.60892 -15.55031 -14.76339 -14.65728 -14.22995 -14.06664 -13.92604 -13.45468 -13.08696 -13.00094 -12.47801 -12.29234 -12.24646 -11.86200 -11.68973 -11.51607 -11.43652 -11.28196 -11.21111 -11.07063 -11.02407 -10.49264 -10.43530 -10.03784 -9.44508 -9.32511 -9.25388 -8.93134 -8.67405 -8.09063 -6.51009 -4.11270 0.20621 0.61559 1.52128 1.61697 2.05608 2.13581 3.12615 3.14235 3.19569 3.23295 3.73499 3.97038 4.10575 4.11513 4.30621 4.34193 4.46708 4.51940 4.55084 4.76008 4.91246 4.95209 5.09228 5.15202 5.29192 5.42768 5.53832 5.60881 5.78251 5.84762 5.97554 6.08024 6.54530 6.63209 6.83663 7.37156 7.81214 8.07701 8.25173 8.88955 8.96801 9.09391 9.63186 10.48724 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.022840 B = 0.002841 C = 0.002578 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1225.606178 B = 9852.051003 C =10858.760267 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.490 5.490 2 C 0.268 3.732 3 C 0.211 3.789 4 N -0.416 5.416 5 C -0.302 4.302 6 H 0.111 0.889 7 C 0.032 3.968 8 N -0.877 5.877 9 Si 0.939 3.061 10 H -0.276 1.276 11 H -0.281 1.281 12 H -0.266 1.266 13 C 0.519 3.481 14 O -0.573 6.573 15 C -0.053 4.053 16 C 0.070 3.930 17 N -0.324 5.324 18 C 0.165 3.835 19 C -0.106 4.106 20 C -0.083 4.083 21 C -0.114 4.114 22 C -0.012 4.012 23 Cl -0.055 7.055 24 C -0.124 4.124 25 N -0.066 5.066 26 N -0.197 5.197 27 H 0.099 0.901 28 H 0.140 0.860 29 H 0.276 0.724 30 H 0.204 0.796 31 H 0.149 0.851 32 H 0.145 0.855 33 H 0.141 0.859 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.421 -20.647 -0.047 21.115 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.170 5.170 2 C -0.050 4.050 3 C 0.084 3.916 4 N -0.133 5.133 5 C -0.430 4.430 6 H 0.129 0.871 7 C -0.172 4.172 8 N -0.516 5.516 9 Si 0.765 3.235 10 H -0.202 1.202 11 H -0.206 1.206 12 H -0.191 1.191 13 C 0.306 3.694 14 O -0.457 6.457 15 C -0.190 4.190 16 C -0.082 4.082 17 N -0.104 5.104 18 C 0.072 3.928 19 C -0.126 4.126 20 C -0.102 4.102 21 C -0.133 4.133 22 C -0.040 4.040 23 Cl -0.026 7.026 24 C -0.146 4.146 25 N -0.044 5.044 26 N -0.071 5.071 27 H 0.117 0.883 28 H 0.158 0.842 29 H 0.087 0.913 30 H 0.220 0.780 31 H 0.166 0.834 32 H 0.163 0.837 33 H 0.159 0.841 34 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 2.282 -20.536 0.768 20.676 hybrid contribution 0.915 0.873 -1.347 1.848 sum 3.198 -19.663 -0.579 19.930 Atomic orbital electron populations 1.80848 1.13748 1.13679 1.08731 1.29042 0.95096 0.88734 0.92127 1.19246 0.81906 1.04432 0.86039 1.43447 1.53588 1.06519 1.09782 1.19848 1.26018 0.80688 1.16440 0.87131 1.25472 0.95065 1.00495 0.96137 1.69798 1.28237 1.29752 1.23810 0.85712 0.79290 0.80062 0.78418 1.20187 1.20621 1.19083 1.16567 0.85691 0.81600 0.85571 1.90661 1.53877 1.85442 1.15673 1.22071 1.08380 0.96435 0.92066 1.23281 0.99603 0.87437 0.97852 1.47545 1.43602 1.04953 1.14318 1.17371 1.01030 0.79105 0.95262 1.21115 0.99254 0.92952 0.99286 1.21055 0.97924 0.94263 0.96976 1.21199 0.98982 1.00470 0.92695 1.20555 1.01438 0.92464 0.89525 1.98402 1.86428 1.85593 1.32222 1.20777 1.02478 0.94473 0.96846 1.82016 1.19846 0.98831 1.03698 1.74883 1.10063 1.07089 1.15057 0.88340 0.84229 0.91264 0.77968 0.83357 0.83684 0.84109 0.83575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -12.62 18.54 42.15 0.78 -11.84 16 2 C 0.27 6.50 12.61 -20.76 -0.26 6.24 16 3 C 0.21 4.66 4.75 -6.83 -0.03 4.63 16 4 N -0.42 -10.12 2.61 -119.15 -0.31 -10.43 16 5 C -0.30 -7.72 9.31 -14.98 -0.14 -7.86 16 6 H 0.11 2.87 7.41 -52.49 -0.39 2.49 16 7 C 0.03 0.79 5.26 -17.46 -0.09 0.70 16 8 N -0.88 -21.97 8.86 55.50 0.49 -21.48 16 9 Si 0.94 19.50 29.55 -169.99 -5.02 14.47 16 10 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 11 H -0.28 -5.72 7.11 56.52 0.40 -5.31 16 12 H -0.27 -5.40 7.11 56.52 0.40 -5.00 16 13 C 0.52 12.21 7.53 -12.52 -0.09 12.12 16 14 O -0.57 -14.67 16.59 5.26 0.09 -14.58 16 15 C -0.05 -1.04 6.64 -83.54 -0.55 -1.59 16 16 C 0.07 1.10 10.62 -16.67 -0.18 0.93 16 17 N -0.32 -4.74 3.82 -10.40 -0.04 -4.78 16 18 C 0.17 1.89 6.69 -83.59 -0.56 1.33 16 19 C -0.11 -1.00 9.68 -39.40 -0.38 -1.38 16 20 C -0.08 -0.56 10.04 -39.61 -0.40 -0.96 16 21 C -0.11 -0.78 9.83 -39.52 -0.39 -1.16 16 22 C -0.01 -0.10 6.32 -39.52 -0.25 -0.35 16 23 Cl -0.06 -0.45 28.95 -51.86 -1.50 -1.95 16 24 C -0.12 -1.21 9.25 -39.37 -0.36 -1.57 16 25 N -0.07 -1.13 13.12 60.35 0.79 -0.34 16 26 N -0.20 -3.82 7.97 32.85 0.26 -3.56 16 27 H 0.10 1.95 5.46 -51.93 -0.28 1.67 16 28 H 0.14 3.12 6.07 -51.93 -0.32 2.80 16 29 H 0.28 6.68 8.31 -40.82 -0.34 6.34 16 30 H 0.20 2.57 7.13 -52.49 -0.37 2.20 16 31 H 0.15 1.39 7.73 -52.49 -0.41 0.99 16 32 H 0.15 0.56 8.06 -52.49 -0.42 0.14 16 33 H 0.14 0.64 8.06 -52.48 -0.42 0.22 16 34 H 0.15 1.29 6.81 -52.49 -0.36 0.93 16 LS Contribution 324.87 15.07 4.90 4.90 Total: -1.00 -31.22 324.87 -5.36 -36.58 By element: Atomic # 1 Polarization: 4.06 SS G_CDS: -2.11 Total: 1.95 kcal Atomic # 6 Polarization: 14.75 SS G_CDS: -3.69 Total: 11.06 kcal Atomic # 7 Polarization: -54.40 SS G_CDS: 1.98 Total: -52.43 kcal Atomic # 8 Polarization: -14.67 SS G_CDS: 0.09 Total: -14.58 kcal Atomic # 14 Polarization: 19.50 SS G_CDS: -5.02 Total: 14.47 kcal Atomic # 17 Polarization: -0.45 SS G_CDS: -1.50 Total: -1.95 kcal Total LS contribution 4.90 Total: 4.90 kcal Total: -31.22 -5.36 -36.58 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000189270870.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 180.714 kcal (2) G-P(sol) polarization free energy of solvation -31.218 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 149.497 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.581 kcal (6) G-S(sol) free energy of system = (1) + (5) 144.134 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds