Wall clock time and date at job start Tue Mar 31 2020 15:51:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13608 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 N 1.46502 * 109.47212 * 312.98851 * 3 2 1 5 5 C 1.36777 * 120.00066 * 96.57711 * 4 3 2 6 6 H 1.07999 * 120.00008 * 156.86286 * 5 4 3 7 7 C 1.39111 * 120.00077 * 336.85895 * 5 4 3 8 8 N 1.31316 * 120.00217 * 354.12809 * 7 5 4 9 9 Si 1.86801 * 120.00147 * 174.12992 * 7 5 4 10 10 H 1.48508 * 109.46889 * 359.97438 * 9 7 5 11 11 H 1.48496 * 109.47589 * 119.99698 * 9 7 5 12 12 H 1.48499 * 109.47099 * 240.00229 * 9 7 5 13 13 C 1.34777 * 119.99727 * 276.57132 * 4 3 2 14 14 O 1.21540 * 120.00254 * 184.85374 * 13 4 3 15 15 C 1.48191 * 119.99870 * 4.86252 * 13 4 3 16 16 C 1.41972 * 126.85113 * 186.62207 * 15 13 4 17 17 C 1.36692 * 103.81691 * 180.02562 * 16 15 13 18 18 C 1.47836 * 126.80640 * 180.02562 * 17 16 15 19 19 C 1.39573 * 120.13320 * 179.97438 * 18 17 16 20 20 C 1.37920 * 119.87239 * 180.02562 * 19 18 17 21 21 C 1.38485 * 120.13138 * 0.02982 * 20 19 18 22 22 Cl 1.73598 * 119.87063 * 179.97438 * 21 20 19 23 23 C 1.38485 * 120.26239 * 0.22766 * 21 20 19 24 24 C 1.37933 * 120.12738 * 359.49263 * 23 21 20 25 25 O 1.34476 * 106.38747 * 0.26199 * 17 16 15 26 26 N 1.20880 * 111.75349 * 359.52567 * 25 17 16 27 27 H 1.09003 * 109.47108 * 192.98468 * 3 2 1 28 28 H 1.08999 * 109.47166 * 72.98609 * 3 2 1 29 29 H 0.96995 * 120.00359 * 180.02562 * 8 7 5 30 30 H 1.08002 * 128.09189 * 0.05704 * 16 15 13 31 31 H 1.08007 * 120.06398 * 0.04783 * 19 18 17 32 32 H 1.08004 * 119.93738 * 180.02562 * 20 19 18 33 33 H 1.07997 * 119.93659 * 179.72793 * 23 21 20 34 34 H 1.07997 * 120.07087 * 180.25875 * 24 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0968 -0.9409 1.0104 5 6 3.4532 -2.2103 0.6466 6 1 4.1401 -2.7750 1.2596 7 6 2.9311 -2.7741 -0.5130 8 7 2.0095 -2.1352 -1.1964 9 14 3.5407 -4.4401 -1.0981 10 1 4.5734 -4.9470 -0.1589 11 1 2.4039 -5.3943 -1.1464 12 1 4.1301 -4.3032 -2.4542 13 6 3.1953 -0.5562 2.2983 14 8 3.6829 -1.3062 3.1210 15 6 2.7089 0.7813 2.7113 16 6 2.8569 1.3843 3.9881 17 6 2.2423 2.5973 3.8495 18 6 2.1025 3.6429 4.8852 19 6 1.4441 4.8377 4.5903 20 6 1.3173 5.8097 5.5605 21 6 1.8420 5.6023 6.8252 22 17 1.6790 6.8306 8.0410 23 6 2.5009 4.4210 7.1222 24 6 2.6290 3.4393 6.1618 25 8 1.7853 2.6489 2.5858 26 7 2.0552 1.6441 1.9704 27 1 2.9709 1.0022 0.2309 28 1 2.9715 -0.2999 -0.9827 29 1 1.6452 -2.5285 -2.0047 30 1 3.3422 0.9794 4.8639 31 1 1.0346 5.0007 3.6043 32 1 0.8077 6.7346 5.3335 33 1 2.9120 4.2666 8.1089 34 1 3.1393 2.5167 6.3958 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195452896.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:51:53 Heat of formation + Delta-G solvation = 96.211421 kcal Electronic energy + Delta-G solvation = -24334.908655 eV Core-core repulsion = 20456.292894 eV Total energy + Delta-G solvation = -3878.615761 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.051 amu Computer time = 2.05 seconds Orbital eigenvalues (eV) -44.69379 -39.56096 -38.84266 -36.84971 -35.84126 -34.37901 -33.74113 -33.09067 -31.83937 -31.46429 -29.46434 -27.53309 -25.82633 -23.88126 -23.82985 -22.62476 -21.80187 -19.59086 -18.11087 -17.94714 -17.52850 -16.86895 -16.65084 -16.22345 -15.67723 -15.28499 -14.86313 -14.23751 -14.06969 -13.90824 -13.88105 -13.55351 -13.48618 -13.11448 -12.97568 -12.22843 -12.08931 -11.98691 -11.85780 -11.60806 -11.34032 -11.25604 -11.18820 -11.13666 -10.61499 -10.51476 -10.41298 -10.15489 -9.90026 -9.46009 -9.39766 -9.06489 -8.43971 -8.20704 -6.64051 -4.21973 0.29488 0.91992 1.66783 1.75517 2.09001 2.96831 3.05602 3.13561 3.19610 3.35809 3.61083 3.89157 4.00075 4.15474 4.27022 4.33000 4.48430 4.52006 4.82889 4.85456 4.89093 5.01918 5.23794 5.26184 5.33102 5.40336 5.57675 5.64030 5.83041 5.85771 6.05975 6.07477 6.25996 6.32525 6.60336 7.27893 7.71303 8.08119 8.34897 8.78283 8.87313 8.97332 9.50867 10.38386 Molecular weight = 331.05amu Principal moments of inertia in cm(-1) A = 0.033374 B = 0.002485 C = 0.002343 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 838.783729 B =11265.004824 C =11948.864338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.481 5.481 2 C 0.265 3.735 3 C 0.220 3.780 4 N -0.414 5.414 5 C -0.306 4.306 6 H 0.114 0.886 7 C 0.033 3.967 8 N -0.874 5.874 9 Si 0.941 3.059 10 H -0.264 1.264 11 H -0.279 1.279 12 H -0.277 1.277 13 C 0.513 3.487 14 O -0.562 6.562 15 C 0.004 3.996 16 C -0.160 4.160 17 C -0.017 4.017 18 C -0.002 4.002 19 C -0.085 4.085 20 C -0.107 4.107 21 C -0.030 4.030 22 Cl -0.070 7.070 23 C -0.106 4.106 24 C -0.081 4.081 25 O 0.116 5.884 26 N -0.333 5.333 27 H 0.087 0.913 28 H 0.136 0.864 29 H 0.278 0.722 30 H 0.179 0.821 31 H 0.143 0.857 32 H 0.139 0.861 33 H 0.140 0.860 34 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.483 15.923 11.247 19.652 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.161 5.161 2 C -0.053 4.053 3 C 0.093 3.907 4 N -0.133 5.133 5 C -0.434 4.434 6 H 0.131 0.869 7 C -0.172 4.172 8 N -0.512 5.512 9 Si 0.766 3.234 10 H -0.188 1.188 11 H -0.205 1.205 12 H -0.202 1.202 13 C 0.301 3.699 14 O -0.444 6.444 15 C -0.154 4.154 16 C -0.181 4.181 17 C -0.080 4.080 18 C -0.003 4.003 19 C -0.104 4.104 20 C -0.126 4.126 21 C -0.057 4.057 22 Cl -0.041 7.041 23 C -0.125 4.125 24 C -0.100 4.100 25 O 0.043 5.957 26 N -0.037 5.037 27 H 0.105 0.895 28 H 0.154 0.846 29 H 0.089 0.911 30 H 0.196 0.804 31 H 0.161 0.839 32 H 0.157 0.843 33 H 0.158 0.842 34 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.545 15.535 10.284 18.638 hybrid contribution 0.737 -0.880 0.342 1.198 sum 1.282 14.654 10.626 18.147 Atomic orbital electron populations 1.80850 1.13557 1.11696 1.10046 1.28856 0.94965 0.90056 0.91465 1.18985 0.82248 0.92556 0.96945 1.43476 1.53713 1.12098 1.04014 1.19904 1.25569 0.89510 1.08392 0.86871 1.25524 0.94785 1.00248 0.96619 1.69730 1.25080 1.39010 1.17413 0.85622 0.78797 0.80328 0.78624 1.18823 1.20487 1.20226 1.16754 0.86279 0.83923 0.82961 1.90646 1.49467 1.53599 1.50725 1.23898 1.01323 0.97937 0.92262 1.22582 1.03502 0.92768 0.99295 1.22243 1.02138 0.96558 0.87055 1.17691 0.99904 0.91806 0.90928 1.21292 0.97249 0.91770 1.00050 1.20991 1.00159 1.00297 0.91142 1.21098 1.02193 0.91544 0.90889 1.98381 1.96577 1.54041 1.55106 1.20957 0.99263 0.91818 1.00454 1.21131 0.98439 0.99503 0.90928 1.84871 1.58329 1.32955 1.19541 1.74413 1.15367 0.94946 1.18932 0.89540 0.84619 0.91102 0.80369 0.83900 0.84308 0.84184 0.84018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -12.15 18.54 42.16 0.78 -11.37 16 2 C 0.26 6.30 11.87 -20.76 -0.25 6.05 16 3 C 0.22 4.77 4.75 -6.83 -0.03 4.74 16 4 N -0.41 -10.04 2.60 -118.90 -0.31 -10.35 16 5 C -0.31 -7.78 9.32 -15.02 -0.14 -7.92 16 6 H 0.11 2.95 7.36 -52.49 -0.39 2.57 16 7 C 0.03 0.80 5.19 -17.45 -0.09 0.71 16 8 N -0.87 -21.71 8.92 55.50 0.50 -21.22 16 9 Si 0.94 19.25 29.56 -169.99 -5.02 14.22 16 10 H -0.26 -5.37 7.11 56.52 0.40 -4.97 16 11 H -0.28 -5.86 7.11 56.52 0.40 -5.46 16 12 H -0.28 -5.49 7.11 56.52 0.40 -5.09 16 13 C 0.51 12.21 7.58 -12.17 -0.09 12.12 16 14 O -0.56 -14.63 16.64 5.33 0.09 -14.54 16 15 C 0.00 0.07 6.71 -82.63 -0.55 -0.48 16 16 C -0.16 -2.52 10.34 -38.71 -0.40 -2.92 16 17 C -0.02 -0.24 7.15 -36.22 -0.26 -0.50 16 18 C 0.00 -0.02 5.87 -104.97 -0.62 -0.64 16 19 C -0.08 -0.79 9.73 -39.20 -0.38 -1.17 16 20 C -0.11 -0.88 9.81 -39.61 -0.39 -1.27 16 21 C -0.03 -0.26 6.32 -39.40 -0.25 -0.51 16 22 Cl -0.07 -0.56 28.95 -51.86 -1.50 -2.06 16 23 C -0.11 -0.86 9.81 -39.60 -0.39 -1.25 16 24 C -0.08 -0.74 9.58 -39.19 -0.38 -1.11 16 25 O 0.12 1.85 11.01 16.01 0.18 2.02 16 26 N -0.33 -6.28 7.70 33.35 0.26 -6.03 16 27 H 0.09 1.66 6.05 -51.93 -0.31 1.34 16 28 H 0.14 2.95 6.30 -51.93 -0.33 2.62 16 29 H 0.28 6.64 8.31 -40.82 -0.34 6.30 16 30 H 0.18 2.40 7.46 -52.49 -0.39 2.01 16 31 H 0.14 1.19 7.96 -52.48 -0.42 0.77 16 32 H 0.14 0.87 8.06 -52.48 -0.42 0.45 16 33 H 0.14 0.86 8.06 -52.49 -0.42 0.44 16 34 H 0.14 1.09 7.14 -52.49 -0.38 0.71 16 LS Contribution 325.96 15.07 4.91 4.91 Total: -1.00 -30.32 325.96 -6.53 -36.85 By element: Atomic # 1 Polarization: 3.89 SS G_CDS: -2.19 Total: 1.70 kcal Atomic # 6 Polarization: 10.07 SS G_CDS: -4.22 Total: 5.86 kcal Atomic # 7 Polarization: -50.19 SS G_CDS: 1.22 Total: -48.97 kcal Atomic # 8 Polarization: -12.78 SS G_CDS: 0.27 Total: -12.51 kcal Atomic # 14 Polarization: 19.25 SS G_CDS: -5.02 Total: 14.22 kcal Atomic # 17 Polarization: -0.56 SS G_CDS: -1.50 Total: -2.06 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -30.32 -6.53 -36.85 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195452896.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.065 kcal (2) G-P(sol) polarization free energy of solvation -30.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 102.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.854 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.05 seconds