Wall clock time and date at job start Tue Mar 31 2020 15:52:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47209 * 179.97438 * 2 1 4 4 N 1.46499 * 109.46798 * 104.60780 * 3 2 1 5 5 C 1.36780 * 120.00050 * 263.31078 * 4 3 2 6 6 H 1.08004 * 120.00194 * 214.46552 * 5 4 3 7 7 C 1.39112 * 120.00531 * 34.46475 * 5 4 3 8 8 N 1.31324 * 119.99113 * 5.58074 * 7 5 4 9 9 Si 1.86796 * 120.00581 * 185.57897 * 7 5 4 10 10 H 1.48504 * 109.46961 * 89.99857 * 9 7 5 11 11 H 1.48496 * 109.47374 * 209.99909 * 9 7 5 12 12 H 1.48494 * 109.47111 * 330.00034 * 9 7 5 13 13 C 1.34781 * 119.99831 * 83.31146 * 4 3 2 14 14 O 1.21541 * 120.00298 * 5.26938 * 13 4 3 15 15 C 1.48190 * 119.99747 * 185.26215 * 13 4 3 16 16 C 1.41970 * 126.84855 * 175.48576 * 15 13 4 17 17 C 1.36699 * 103.81217 * 180.12081 * 16 15 13 18 18 C 1.47824 * 126.80334 * 179.97438 * 17 16 15 19 19 C 1.39577 * 120.15193 * 309.42490 * 18 17 16 20 20 C 1.37937 * 119.87261 * 180.27657 * 19 18 17 21 21 C 1.38392 * 120.16808 * 0.02562 * 20 19 18 22 22 C 1.38294 * 120.30954 * 359.97438 * 21 20 19 23 23 C 1.38125 * 120.12890 * 0.02562 * 22 21 20 24 24 Cl 1.73598 * 120.08419 * 179.97438 * 23 22 21 25 25 O 1.34475 * 106.38847 * 359.66599 * 17 16 15 26 26 N 1.20871 * 111.75255 * 0.22718 * 25 17 16 27 27 H 1.08991 * 109.46994 * 344.60657 * 3 2 1 28 28 H 1.09002 * 109.46840 * 224.60486 * 3 2 1 29 29 H 0.97000 * 119.99235 * 180.02562 * 8 7 5 30 30 H 1.07996 * 128.09625 * 0.05624 * 16 15 13 31 31 H 1.08002 * 120.06377 * 0.26188 * 19 18 17 32 32 H 1.07997 * 119.91204 * 179.97438 * 20 19 18 33 33 H 1.08001 * 119.84307 * 180.02562 * 21 20 19 34 34 H 1.08000 * 119.93566 * 180.02562 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 7 3.0962 0.3492 -1.3366 5 6 3.4547 -0.6380 -2.2128 6 1 4.2718 -0.4789 -2.9008 7 6 2.7668 -1.8472 -2.2178 8 7 1.7056 -2.0018 -1.4598 9 14 3.3524 -3.2506 -3.3025 10 1 4.3194 -4.0886 -2.5487 11 1 2.1900 -4.0804 -3.7090 12 1 4.0137 -2.6986 -4.5121 13 6 3.1920 1.6428 -1.7029 14 8 2.9656 2.5217 -0.8945 15 6 3.5737 1.9934 -3.0912 16 6 3.6313 3.2948 -3.6555 17 6 4.0287 3.0743 -4.9447 18 6 4.2506 4.0956 -5.9900 19 6 3.2720 5.0562 -6.2506 20 6 3.4827 6.0031 -7.2312 21 6 4.6610 6.0024 -7.9570 22 6 5.6355 5.0541 -7.7049 23 6 5.4376 4.1001 -6.7258 24 17 6.6614 2.9098 -6.4107 25 8 4.1845 1.7446 -5.0715 26 7 3.9301 1.1636 -4.0425 27 1 2.9718 -0.9899 0.2728 28 1 2.9710 0.7325 0.7217 29 1 1.2261 -2.8451 -1.4630 30 1 3.4115 4.2383 -3.1782 31 1 2.3515 5.0579 -5.6857 32 1 2.7258 6.7463 -7.4337 33 1 4.8206 6.7465 -8.7234 34 1 6.5529 5.0594 -8.2746 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355712406.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:52:03 Heat of formation + Delta-G solvation = 94.569592 kcal Electronic energy + Delta-G solvation = -24726.322797 eV Core-core repulsion = 20847.635841 eV Total energy + Delta-G solvation = -3878.686956 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.051 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -44.37004 -39.44700 -38.80949 -36.55699 -35.65630 -34.44573 -33.58308 -32.87538 -31.75785 -31.05790 -29.49953 -27.82927 -25.25042 -23.77232 -23.51513 -22.59114 -21.69901 -19.52761 -18.58199 -17.43579 -17.20569 -16.65671 -16.37063 -16.16889 -15.51607 -15.14109 -14.68469 -14.49528 -14.15022 -13.85280 -13.79463 -13.51394 -13.08869 -13.05206 -12.68856 -12.04391 -11.96127 -11.78273 -11.69158 -11.57878 -11.40241 -11.22676 -11.15258 -10.96182 -10.49880 -10.40043 -10.27547 -9.85203 -9.68211 -9.36400 -9.09896 -9.06171 -8.57537 -8.07625 -6.61205 -4.27742 0.60673 0.92074 1.84776 1.97288 2.21669 3.08808 3.14394 3.16670 3.21891 3.48222 3.60096 4.01786 4.10306 4.22731 4.43188 4.52497 4.57496 4.75906 4.84457 4.93036 5.02456 5.07234 5.33886 5.43051 5.51872 5.54343 5.67847 5.86801 5.97942 6.01492 6.10272 6.27762 6.42132 6.43582 6.50559 7.33505 7.42950 8.18068 8.63132 8.85613 8.93799 9.10675 9.49201 10.42770 Molecular weight = 331.05amu Principal moments of inertia in cm(-1) A = 0.015686 B = 0.003767 C = 0.003297 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1784.546540 B = 7431.965868 C = 8489.730776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.478 5.478 2 C 0.257 3.743 3 C 0.232 3.768 4 N -0.416 5.416 5 C -0.332 4.332 6 H 0.120 0.880 7 C 0.046 3.954 8 N -0.864 5.864 9 Si 0.929 3.071 10 H -0.274 1.274 11 H -0.282 1.282 12 H -0.262 1.262 13 C 0.532 3.468 14 O -0.587 6.587 15 C 0.006 3.994 16 C -0.158 4.158 17 C -0.033 4.033 18 C 0.001 3.999 19 C -0.080 4.080 20 C -0.115 4.115 21 C -0.101 4.101 22 C -0.112 4.112 23 C -0.016 4.016 24 Cl -0.051 7.051 25 O 0.121 5.879 26 N -0.294 5.294 27 H 0.119 0.881 28 H 0.093 0.907 29 H 0.278 0.722 30 H 0.175 0.825 31 H 0.140 0.860 32 H 0.135 0.865 33 H 0.134 0.866 34 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.748 12.167 -12.022 19.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.159 5.159 2 C -0.060 4.060 3 C 0.106 3.894 4 N -0.135 5.135 5 C -0.460 4.460 6 H 0.137 0.863 7 C -0.162 4.162 8 N -0.500 5.500 9 Si 0.754 3.246 10 H -0.199 1.199 11 H -0.208 1.208 12 H -0.186 1.186 13 C 0.321 3.679 14 O -0.471 6.471 15 C -0.151 4.151 16 C -0.180 4.180 17 C -0.096 4.096 18 C -0.001 4.001 19 C -0.099 4.099 20 C -0.133 4.133 21 C -0.119 4.119 22 C -0.131 4.131 23 C -0.043 4.043 24 Cl -0.021 7.021 25 O 0.045 5.955 26 N 0.006 4.994 27 H 0.137 0.863 28 H 0.110 0.890 29 H 0.089 0.911 30 H 0.192 0.808 31 H 0.158 0.842 32 H 0.152 0.848 33 H 0.152 0.848 34 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 7.049 10.961 -11.508 17.386 hybrid contribution 0.499 -0.332 -0.407 0.725 sum 7.548 10.629 -11.915 17.661 Atomic orbital electron populations 1.80828 1.13609 1.12241 1.09198 1.28920 0.95097 0.90108 0.91924 1.18531 0.81919 1.02920 0.85987 1.43368 1.54140 1.04363 1.11588 1.20125 1.16312 0.93102 1.16508 0.86308 1.25562 0.93994 0.99840 0.96777 1.69607 1.16084 1.26629 1.37706 0.85858 0.78361 0.79885 0.80463 1.19916 1.20782 1.18592 1.17043 0.83231 0.83292 0.84368 1.90664 1.57072 1.48103 1.51283 1.23260 1.05101 0.89719 0.97048 1.22533 1.04123 0.99180 0.92168 1.22076 1.06968 0.85409 0.95131 1.17511 0.93632 0.94321 0.94679 1.21274 0.98044 0.93303 0.97235 1.21178 0.97813 0.98680 0.95656 1.21243 0.93210 0.98045 0.99407 1.21011 1.00627 0.94320 0.97101 1.21132 0.91065 0.93942 0.98189 1.98414 1.53179 1.55690 1.94856 1.85065 1.62984 1.16096 1.31346 1.74664 1.13269 1.18780 0.92662 0.86310 0.88966 0.91102 0.80787 0.84246 0.84751 0.84823 0.84465 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -12.42 18.54 42.15 0.78 -11.64 16 2 C 0.26 6.30 13.08 -20.76 -0.27 6.03 16 3 C 0.23 5.11 5.10 -6.83 -0.03 5.07 16 4 N -0.42 -10.03 2.56 -118.89 -0.30 -10.34 16 5 C -0.33 -8.12 8.16 -15.02 -0.12 -8.24 16 6 H 0.12 2.91 5.73 -52.48 -0.30 2.61 16 7 C 0.05 1.11 5.16 -17.44 -0.09 1.02 16 8 N -0.86 -21.90 9.38 55.50 0.52 -21.38 16 9 Si 0.93 19.45 29.56 -169.99 -5.02 14.43 16 10 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 11 H -0.28 -6.03 7.11 56.52 0.40 -5.62 16 12 H -0.26 -5.53 7.11 56.52 0.40 -5.13 16 13 C 0.53 12.80 7.57 -12.17 -0.09 12.71 16 14 O -0.59 -14.71 16.61 5.33 0.09 -14.62 16 15 C 0.01 0.14 6.90 -82.63 -0.57 -0.43 16 16 C -0.16 -2.79 10.89 -38.71 -0.42 -3.21 16 17 C -0.03 -0.53 6.14 -36.22 -0.22 -0.75 16 18 C 0.00 0.01 5.82 -104.95 -0.61 -0.60 16 19 C -0.08 -0.81 9.73 -39.19 -0.38 -1.19 16 20 C -0.12 -0.88 10.03 -39.63 -0.40 -1.28 16 21 C -0.10 -0.72 10.04 -39.50 -0.40 -1.12 16 22 C -0.11 -0.98 9.82 -39.60 -0.39 -1.36 16 23 C -0.02 -0.19 6.35 -39.09 -0.25 -0.44 16 24 Cl -0.05 -0.65 27.50 -51.86 -1.43 -2.07 16 25 O 0.12 2.26 10.51 16.02 0.17 2.43 16 26 N -0.29 -6.31 8.88 33.35 0.30 -6.02 16 27 H 0.12 2.48 7.16 -51.93 -0.37 2.11 16 28 H 0.09 1.80 7.56 -51.93 -0.39 1.41 16 29 H 0.28 6.88 8.31 -40.82 -0.34 6.54 16 30 H 0.17 2.69 8.06 -52.49 -0.42 2.27 16 31 H 0.14 1.28 8.06 -52.49 -0.42 0.86 16 32 H 0.13 0.68 8.06 -52.49 -0.42 0.26 16 33 H 0.13 0.57 8.06 -52.49 -0.42 0.15 16 34 H 0.14 0.92 8.06 -52.49 -0.42 0.49 16 LS Contribution 328.68 15.07 4.95 4.95 Total: -1.00 -30.75 328.68 -6.51 -37.26 By element: Atomic # 1 Polarization: 3.12 SS G_CDS: -2.31 Total: 0.81 kcal Atomic # 6 Polarization: 10.45 SS G_CDS: -4.25 Total: 6.20 kcal Atomic # 7 Polarization: -50.67 SS G_CDS: 1.29 Total: -49.38 kcal Atomic # 8 Polarization: -12.45 SS G_CDS: 0.26 Total: -12.20 kcal Atomic # 14 Polarization: 19.45 SS G_CDS: -5.02 Total: 14.43 kcal Atomic # 17 Polarization: -0.65 SS G_CDS: -1.43 Total: -2.07 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -30.75 -6.51 -37.26 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355712406.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.830 kcal (2) G-P(sol) polarization free energy of solvation -30.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.078 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.508 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.260 kcal (6) G-S(sol) free energy of system = (1) + (5) 94.570 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds