Wall clock time and date at job start Tue Mar 31 2020 17:08:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17397 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 N 1.46500 * 109.47119 * 129.43918 * 3 2 1 5 5 C 1.36886 * 119.99638 * 264.14772 * 4 3 2 6 6 H 1.08008 * 119.99805 * 205.47377 * 5 4 3 7 7 C 1.39028 * 120.00094 * 25.47837 * 5 4 3 8 8 N 1.31371 * 120.00015 * 9.11477 * 7 5 4 9 9 Si 1.86809 * 120.00089 * 189.11808 * 7 5 4 10 10 H 1.48499 * 109.47065 * 89.99645 * 9 7 5 11 11 H 1.48494 * 109.47105 * 209.99754 * 9 7 5 12 12 H 1.48500 * 109.46592 * 329.99924 * 9 7 5 13 13 C 1.34777 * 120.00398 * 84.14793 * 4 3 2 14 14 O 1.21621 * 119.99466 * 5.40265 * 13 4 3 15 15 C 1.47508 * 120.00271 * 185.40185 * 13 4 3 16 16 C 1.39801 * 120.09570 * 42.16087 * 15 13 4 17 17 C 1.37665 * 119.92397 * 179.72529 * 16 15 13 18 18 C 1.39098 * 120.12619 * 0.56941 * 17 16 15 19 19 N 1.39962 * 119.90493 * 179.72252 * 18 17 16 20 20 C 1.35139 * 127.39345 * 359.73000 * 19 18 17 21 21 N 1.30717 * 107.26503 * 180.02562 * 20 19 18 22 22 N 1.28423 * 110.65447 * 0.02562 * 21 20 19 23 23 N 1.28940 * 110.21674 * 359.97438 * 22 21 20 24 24 C 1.38946 * 120.18730 * 359.44904 * 18 17 16 25 25 C 1.37921 * 120.07815 * 0.25299 * 24 18 17 26 26 Cl 1.73594 * 120.06135 * 179.97438 * 25 24 18 27 27 H 4.40638 * 5.51546 * 180.02562 * 4 1 2 28 28 H 1.09000 * 109.47404 * 9.43179 * 3 2 1 29 29 H 1.09004 * 109.46736 * 249.43666 * 3 2 1 30 30 H 0.97004 * 119.99761 * 179.97438 * 8 7 5 31 31 H 1.08008 * 120.03650 * 0.02562 * 16 15 13 32 32 H 1.08003 * 119.94116 * 180.31928 * 17 16 15 33 33 H 1.07995 * 126.36981 * 0.03738 * 20 19 18 34 34 H 1.08003 * 119.95449 * 180.27185 * 24 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6459 0.0007 0.0000 4 7 3.1339 0.8783 -1.0667 5 6 3.4762 0.3519 -2.2831 6 1 4.1914 0.8630 -2.9106 7 6 2.9031 -0.8404 -2.7107 8 7 1.9067 -1.3689 -2.0372 9 14 3.5501 -1.6910 -4.2429 10 1 4.6324 -2.6350 -3.8653 11 1 2.4467 -2.4389 -4.8971 12 1 4.0857 -0.6749 -5.1842 13 6 3.2457 2.2039 -0.8505 14 8 3.0362 2.6590 0.2577 15 6 3.6223 3.1027 -1.9579 16 6 3.0637 2.9238 -3.2269 17 6 3.4134 3.7681 -4.2564 18 6 4.3303 4.7914 -4.0393 19 7 4.6868 5.6435 -5.0908 20 6 4.2406 5.6049 -6.3658 21 7 4.8283 6.5774 -7.0121 22 7 5.6157 7.2278 -6.2336 23 7 5.5869 6.7229 -5.0475 24 6 4.8888 4.9735 -2.7801 25 6 4.5397 4.1361 -1.7414 26 17 5.2383 4.3635 -0.1686 27 1 -1.0502 0.0000 0.0003 28 1 3.0098 -1.0129 -0.1684 29 1 3.0090 0.3618 0.9622 30 1 1.5067 -2.2007 -2.3358 31 1 2.3549 2.1270 -3.3981 32 1 2.9781 3.6334 -5.2356 33 1 3.5304 4.9016 -6.7747 34 1 5.5971 5.7719 -2.6147 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491014995.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:08:23 Heat of formation + Delta-G solvation = 189.040605 kcal Electronic energy + Delta-G solvation = -24935.596538 eV Core-core repulsion = 21093.298903 eV Total energy + Delta-G solvation = -3842.297635 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.058 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -43.33868 -39.96348 -38.33072 -36.39178 -35.32502 -34.89457 -32.52224 -32.13520 -31.72901 -30.88859 -30.13877 -26.84198 -25.66678 -24.63084 -23.99632 -22.42505 -21.75414 -19.88435 -18.84773 -18.31940 -17.24930 -16.75579 -16.48647 -16.27206 -15.67396 -15.03020 -14.70579 -14.59599 -14.12638 -13.97134 -13.68960 -13.58864 -13.41308 -12.81554 -12.44119 -12.33645 -12.18473 -12.06412 -11.70754 -11.47777 -11.28842 -11.22274 -11.12558 -10.76962 -10.68668 -10.65143 -10.64236 -9.62392 -9.45964 -8.96014 -8.86057 -8.75603 -8.48860 -8.13132 -6.63504 -4.30115 0.11975 1.10668 1.42414 1.56775 2.09467 2.31395 2.89852 3.01204 3.03269 3.22316 3.64918 3.86708 3.89850 3.90882 4.11614 4.16001 4.56829 4.67082 4.68904 4.73514 4.90977 5.16398 5.19340 5.39996 5.42860 5.58262 5.74779 5.95569 6.09509 6.23362 6.32855 6.52831 6.67194 6.71558 7.04045 7.06222 7.38637 8.01915 8.21974 8.71426 8.86014 9.08583 9.51260 10.31927 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.012229 B = 0.004465 C = 0.003600 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2289.105770 B = 6269.013869 C = 7776.953761 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.271 4.271 2 C -0.097 4.097 3 C 0.242 3.758 4 N -0.420 5.420 5 C -0.346 4.346 6 H 0.101 0.899 7 C 0.043 3.957 8 N -0.844 5.844 9 Si 0.920 3.080 10 H -0.274 1.274 11 H -0.281 1.281 12 H -0.267 1.267 13 C 0.490 3.510 14 O -0.576 6.576 15 C -0.060 4.060 16 C -0.033 4.033 17 C -0.130 4.130 18 C 0.129 3.871 19 N -0.316 5.316 20 C 0.226 3.774 21 N -0.334 5.334 22 N -0.041 5.041 23 N -0.078 5.078 24 C -0.105 4.105 25 C 0.009 3.991 26 Cl -0.034 7.034 27 H 0.197 0.803 28 H 0.107 0.893 29 H 0.070 0.930 30 H 0.275 0.725 31 H 0.167 0.833 32 H 0.140 0.860 33 H 0.240 0.760 34 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.399 4.178 -4.862 6.562 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.290 4.290 2 C -0.099 4.099 3 C 0.120 3.880 4 N -0.137 5.137 5 C -0.473 4.473 6 H 0.118 0.882 7 C -0.166 4.166 8 N -0.478 5.478 9 Si 0.746 3.254 10 H -0.199 1.199 11 H -0.206 1.206 12 H -0.191 1.191 13 C 0.278 3.722 14 O -0.461 6.461 15 C -0.065 4.065 16 C -0.052 4.052 17 C -0.151 4.151 18 C 0.036 3.964 19 N -0.106 5.106 20 C -0.071 4.071 21 N -0.183 5.183 22 N -0.036 5.036 23 N -0.063 5.063 24 C -0.126 4.126 25 C -0.020 4.020 26 Cl -0.005 7.005 27 H 0.214 0.786 28 H 0.125 0.875 29 H 0.088 0.912 30 H 0.086 0.914 31 H 0.185 0.815 32 H 0.157 0.843 33 H 0.256 0.744 34 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 2.142 5.340 -4.341 7.208 hybrid contribution -0.514 -1.458 -0.653 1.678 sum 1.628 3.882 -4.994 6.532 Atomic orbital electron populations 1.24181 0.95304 1.04506 1.04961 1.22944 0.94134 0.96708 0.96085 1.18074 0.84366 0.95928 0.89592 1.43521 1.54204 1.03770 1.12202 1.19701 1.24485 1.07927 0.95195 0.88157 1.25429 0.94542 0.97561 0.99019 1.69976 1.19695 1.19426 1.38741 0.86017 0.78665 0.79804 0.80904 1.19944 1.20591 1.19145 1.17744 0.84444 0.82408 0.87557 1.90730 1.56265 1.75460 1.23629 1.20232 0.95472 0.95178 0.95572 1.21538 0.97569 0.96641 0.89480 1.20868 0.98421 0.94549 1.01299 1.17383 1.00625 0.92577 0.85767 1.48966 1.29980 1.22575 1.09056 1.27461 0.99243 0.98804 0.81549 1.74460 1.10016 1.06890 1.26951 1.78054 1.12108 1.18116 0.95308 1.82674 1.09129 0.97766 1.16716 1.20529 1.01758 1.00766 0.89577 1.20669 0.96929 0.96440 0.87946 1.98396 1.82233 1.96198 1.23676 0.78569 0.87547 0.91222 0.91360 0.81522 0.84263 0.74381 0.83385 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.27 -5.59 19.25 29.55 0.57 -5.02 16 2 C -0.10 -2.17 11.26 -37.12 -0.42 -2.59 16 3 C 0.24 5.30 5.11 -6.83 -0.03 5.27 16 4 N -0.42 -9.26 2.59 -119.13 -0.31 -9.57 16 5 C -0.35 -7.33 7.15 -15.00 -0.11 -7.44 16 6 H 0.10 2.03 6.26 -52.48 -0.33 1.70 16 7 C 0.04 0.91 5.11 -17.46 -0.09 0.82 16 8 N -0.84 -18.98 9.09 55.50 0.50 -18.48 16 9 Si 0.92 16.72 29.56 -169.99 -5.03 11.69 16 10 H -0.27 -5.11 7.11 56.52 0.40 -4.71 16 11 H -0.28 -5.21 7.11 56.52 0.40 -4.81 16 12 H -0.27 -4.67 7.11 56.52 0.40 -4.27 16 13 C 0.49 10.63 6.82 -12.48 -0.09 10.55 16 14 O -0.58 -13.78 15.07 5.26 0.08 -13.70 16 15 C -0.06 -1.09 5.07 -104.93 -0.53 -1.62 16 16 C -0.03 -0.50 7.79 -39.21 -0.31 -0.81 16 17 C -0.13 -1.56 9.47 -39.47 -0.37 -1.94 16 18 C 0.13 1.69 6.71 -83.56 -0.56 1.13 16 19 N -0.32 -4.00 3.85 -11.71 -0.05 -4.04 16 20 C 0.23 2.33 12.15 -90.11 -1.09 1.24 16 21 N -0.33 -4.40 12.15 29.65 0.36 -4.04 16 22 N -0.04 -0.61 13.39 60.35 0.81 0.20 16 23 N -0.08 -1.13 13.31 60.35 0.80 -0.33 16 24 C -0.11 -1.51 9.46 -39.44 -0.37 -1.88 16 25 C 0.01 0.15 6.33 -39.09 -0.25 -0.09 16 26 Cl -0.03 -0.59 26.90 -51.86 -1.39 -1.98 16 27 H 0.20 3.31 7.80 -54.08 -0.42 2.88 16 28 H 0.11 2.34 6.65 -51.93 -0.35 2.00 16 29 H 0.07 1.48 7.53 -51.93 -0.39 1.09 16 30 H 0.28 6.00 8.31 -40.82 -0.34 5.66 16 31 H 0.17 2.70 6.77 -52.48 -0.36 2.35 16 32 H 0.14 1.11 6.86 -52.48 -0.36 0.75 16 33 H 0.24 1.19 7.17 -52.49 -0.38 0.81 16 34 H 0.15 1.99 7.75 -52.48 -0.41 1.59 16 LS Contribution 323.99 15.07 4.88 4.88 Total: -1.00 -27.61 323.99 -5.11 -32.72 By element: Atomic # 1 Polarization: 7.16 SS G_CDS: -2.12 Total: 5.04 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -3.65 Total: -2.40 kcal Atomic # 7 Polarization: -38.38 SS G_CDS: 2.12 Total: -36.26 kcal Atomic # 8 Polarization: -13.78 SS G_CDS: 0.08 Total: -13.70 kcal Atomic # 14 Polarization: 16.72 SS G_CDS: -5.03 Total: 11.69 kcal Atomic # 17 Polarization: -0.59 SS G_CDS: -1.39 Total: -1.98 kcal Total LS contribution 4.88 Total: 4.88 kcal Total: -27.61 -5.11 -32.72 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491014995.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 221.763 kcal (2) G-P(sol) polarization free energy of solvation -27.615 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 194.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.108 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.722 kcal (6) G-S(sol) free energy of system = (1) + (5) 189.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds