Wall clock time and date at job start Tue Mar 31 2020 15:45:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35926 * 116.99870 * 2 1 4 4 C 1.38752 * 120.03988 * 0.02562 * 3 2 1 5 5 C 1.38117 * 119.95326 * 180.02562 * 4 3 2 6 6 C 1.38387 * 120.04674 * 0.02562 * 5 4 3 7 7 Cl 1.73596 * 119.96091 * 179.97438 * 6 5 4 8 8 C 1.38345 * 120.08488 * 359.97438 * 6 5 4 9 9 S 1.76196 * 119.98101 * 179.72873 * 8 6 5 10 10 O 1.42095 * 106.40579 * 48.53644 * 9 8 6 11 11 O 1.42101 * 106.40397 * 181.45958 * 9 8 6 12 12 N 1.65604 * 107.21541 * 294.99780 * 9 8 6 13 13 C 1.47067 * 136.05711 * 269.62681 * 12 9 8 14 14 C 1.53762 * 87.88460 * 152.96479 * 13 12 9 15 15 C 1.50699 * 114.26453 * 139.79392 * 14 13 12 16 16 H 1.08007 * 120.00343 * 266.47761 * 15 14 13 17 17 C 1.37877 * 120.00435 * 86.47450 * 15 14 13 18 18 N 1.31521 * 119.99416 * 359.97438 * 17 15 14 19 19 Si 1.86799 * 120.00471 * 180.02562 * 17 15 14 20 20 H 1.48496 * 109.47111 * 359.97438 * 19 17 15 21 21 H 1.48496 * 109.47286 * 119.99930 * 19 17 15 22 22 H 1.48502 * 109.47032 * 240.00183 * 19 17 15 23 23 C 1.47069 * 136.05730 * 89.99861 * 12 9 8 24 24 C 1.38165 * 120.03991 * 0.02562 * 8 6 5 25 25 H 1.08997 * 109.47106 * 180.02562 * 1 2 3 26 26 H 1.09011 * 109.47433 * 299.99594 * 1 2 3 27 27 H 1.09000 * 109.47436 * 59.99517 * 1 2 3 28 28 H 1.07995 * 120.02092 * 0.02562 * 4 3 2 29 29 H 1.07999 * 119.97834 * 179.97438 * 5 4 3 30 30 H 1.08997 * 113.47089 * 267.69317 * 13 12 9 31 31 H 1.08999 * 113.46710 * 38.13918 * 13 12 9 32 32 H 1.08993 * 114.39467 * 272.67396 * 14 13 12 33 33 H 0.97001 * 119.99394 * 180.02562 * 18 17 15 34 34 H 1.08999 * 113.46852 * 321.86764 * 23 12 9 35 35 H 1.09010 * 113.46461 * 92.24830 * 23 12 9 36 36 H 1.08002 * 120.02292 * 179.97438 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2111 0.0000 4 6 1.2911 2.3753 0.0005 5 6 1.9200 3.6050 0.0000 6 6 3.3020 3.6765 -0.0016 7 17 4.0901 5.2233 -0.0030 8 6 4.0564 2.5169 -0.0021 9 16 5.8158 2.6111 -0.0114 10 8 6.1735 3.5367 1.0056 11 8 6.2892 1.2716 -0.0447 12 7 6.2621 3.3007 -1.4494 13 6 6.6012 2.8163 -2.7960 14 6 6.1207 4.1709 -3.3422 15 6 6.9769 4.7314 -4.4485 16 1 7.7762 5.4198 -4.2167 17 6 6.7399 4.3656 -5.7565 18 7 5.7669 3.5269 -6.0387 19 14 7.8016 5.0598 -7.1277 20 1 8.8199 5.9738 -6.5508 21 1 8.4807 3.9475 -7.8395 22 1 6.9478 5.8107 -8.0829 23 6 6.5003 4.6665 -1.9400 24 6 3.4310 1.2848 -0.0016 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3634 0.5138 0.8901 27 1 -0.3634 0.5139 -0.8899 28 1 0.2126 2.3199 0.0014 29 1 1.3328 4.5114 0.0000 30 1 7.6679 2.6441 -2.9396 31 1 5.9902 1.9742 -3.1209 32 1 5.0534 4.2161 -3.5585 33 1 5.6004 3.2692 -6.9589 34 1 5.8034 5.4006 -1.5357 35 1 7.5403 4.9824 -1.8570 36 1 4.0202 0.3797 -0.0025 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000594827099.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 15:45:49 Heat of formation + Delta-G solvation = -43.180445 kcal Electronic energy + Delta-G solvation = -24204.430532 eV Core-core repulsion = 20422.921486 eV Total energy + Delta-G solvation = -3781.509046 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.048 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -40.40667 -38.22527 -37.93361 -36.88214 -36.25674 -35.49011 -32.60168 -31.68457 -30.28622 -28.30752 -27.59151 -24.94431 -24.54325 -23.47360 -22.70268 -19.94468 -19.15090 -17.99128 -17.07408 -16.87298 -16.71429 -16.42028 -16.05902 -16.04254 -15.32227 -14.58617 -14.32638 -14.14314 -13.96424 -13.62399 -13.03274 -12.94824 -12.79781 -12.67182 -12.15964 -11.80541 -11.75741 -11.68435 -11.59082 -11.52447 -11.42195 -11.16183 -10.99773 -10.84018 -10.59041 -10.53114 -10.21675 -9.67388 -9.14681 -9.04202 -8.56800 -8.39570 -8.18828 -6.13618 -4.17910 0.41914 0.75368 0.98446 1.94992 2.93764 3.08527 3.25908 3.34904 3.38140 3.45127 4.03850 4.35335 4.37129 4.52431 4.58044 4.75578 4.82843 4.99356 5.08981 5.15482 5.19095 5.52742 5.54731 5.75219 5.85378 5.88055 6.09812 6.20306 6.32656 6.44176 6.53463 6.75687 6.87502 7.00898 7.52961 7.66345 7.84963 8.25434 8.86036 9.47948 10.96072 Molecular weight = 331.05amu Principal moments of inertia in cm(-1) A = 0.013825 B = 0.004261 C = 0.003927 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2024.897673 B = 6569.135814 C = 7128.939417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.311 6.311 3 C 0.110 3.890 4 C -0.150 4.150 5 C -0.089 4.089 6 C 0.020 3.980 7 Cl -0.034 7.034 8 C -0.627 4.627 9 S 2.708 3.292 10 O -0.950 6.950 11 O -0.960 6.960 12 N -1.040 6.040 13 C 0.131 3.869 14 C 0.036 3.964 15 C -0.514 4.514 16 H 0.064 0.936 17 C 0.068 3.932 18 N -0.886 5.886 19 Si 0.894 3.106 20 H -0.271 1.271 21 H -0.283 1.283 22 H -0.284 1.284 23 C 0.125 3.875 24 C -0.041 4.041 25 H 0.103 0.897 26 H 0.056 0.944 27 H 0.058 0.942 28 H 0.143 0.857 29 H 0.145 0.855 30 H 0.075 0.925 31 H 0.058 0.942 32 H 0.068 0.932 33 H 0.262 0.738 34 H 0.059 0.941 35 H 0.074 0.926 36 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.495 -2.732 11.327 16.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.224 6.224 3 C 0.064 3.936 4 C -0.169 4.169 5 C -0.109 4.109 6 C -0.009 4.009 7 Cl -0.005 7.005 8 C -0.710 4.710 9 S 2.797 3.203 10 O -0.940 6.940 11 O -0.950 6.950 12 N -0.883 5.883 13 C 0.007 3.993 14 C 0.014 3.986 15 C -0.553 4.553 16 H 0.083 0.917 17 C -0.135 4.135 18 N -0.523 5.523 19 Si 0.721 3.279 20 H -0.196 1.196 21 H -0.210 1.210 22 H -0.210 1.210 23 C 0.000 4.000 24 C -0.061 4.061 25 H 0.122 0.878 26 H 0.075 0.925 27 H 0.077 0.923 28 H 0.161 0.839 29 H 0.162 0.838 30 H 0.094 0.906 31 H 0.077 0.923 32 H 0.086 0.914 33 H 0.072 0.928 34 H 0.077 0.923 35 H 0.092 0.908 36 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -11.000 -3.285 12.098 16.678 hybrid contribution -0.591 0.515 -1.022 1.288 sum -11.591 -2.770 11.076 16.270 Atomic orbital electron populations 1.23137 0.78069 1.04409 1.01483 1.86125 1.21611 1.26044 1.88606 1.19049 0.92290 0.84638 0.97596 1.21430 1.00558 0.91678 1.03197 1.20935 0.92229 0.98437 0.99253 1.20356 0.93148 0.86653 1.00700 1.98441 1.79096 1.26834 1.96105 1.31194 1.29233 0.96585 1.14016 1.01456 0.73220 0.73167 0.72447 1.93581 1.81303 1.63848 1.55264 1.93539 1.78336 1.36641 1.86534 1.59786 1.81090 1.20883 1.26528 1.23155 0.99831 1.01183 0.75158 1.20518 0.98304 0.90301 0.89446 1.21026 1.16110 1.27508 0.90662 0.91747 1.25027 0.94985 0.94699 0.98834 1.69969 1.29886 1.32985 1.19490 0.86512 0.80450 0.78968 0.81935 1.19557 1.20953 1.21011 1.22997 1.00100 0.81280 0.95604 1.20147 0.92023 0.96931 0.96981 0.87836 0.92518 0.92293 0.83947 0.83762 0.90645 0.92345 0.91397 0.92783 0.92310 0.90757 0.82374 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.17 9.81 101.05 0.99 1.16 16 2 O -0.31 -3.65 10.50 -19.51 -0.20 -3.86 16 3 C 0.11 1.46 6.69 -39.22 -0.26 1.20 16 4 C -0.15 -1.68 9.04 -39.44 -0.36 -2.04 16 5 C -0.09 -1.11 9.82 -39.57 -0.39 -1.50 16 6 C 0.02 0.31 6.30 -39.49 -0.25 0.06 16 7 Cl -0.03 -0.54 23.57 -51.86 -1.22 -1.77 16 8 C -0.63 -10.49 5.91 -39.57 -0.23 -10.73 16 9 S 2.71 51.10 5.60 -107.50 -0.60 50.50 16 10 O -0.95 -18.96 16.48 -57.17 -0.94 -19.90 16 11 O -0.96 -19.58 16.97 -57.17 -0.97 -20.55 16 12 N -1.04 -20.66 4.10 -125.01 -0.51 -21.17 16 13 C 0.13 2.84 8.31 -8.36 -0.07 2.77 16 14 C 0.04 0.82 3.79 -91.12 -0.35 0.47 16 15 C -0.51 -12.96 8.83 -34.44 -0.30 -13.27 16 16 H 0.06 1.59 7.81 -52.48 -0.41 1.18 16 17 C 0.07 1.76 5.46 -17.82 -0.10 1.66 16 18 N -0.89 -24.09 13.26 55.43 0.74 -23.36 16 19 Si 0.89 20.06 29.54 -169.99 -5.02 15.04 16 20 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 21 H -0.28 -6.39 7.11 56.52 0.40 -5.98 16 22 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 23 C 0.12 2.49 7.89 -8.51 -0.07 2.42 16 24 C -0.04 -0.63 9.49 -39.44 -0.37 -1.00 16 25 H 0.10 0.52 8.14 -51.93 -0.42 0.09 16 26 H 0.06 0.31 7.66 -51.92 -0.40 -0.09 16 27 H 0.06 0.36 7.66 -51.93 -0.40 -0.04 16 28 H 0.14 1.07 6.30 -52.49 -0.33 0.74 16 29 H 0.14 1.38 8.06 -52.49 -0.42 0.96 16 30 H 0.08 1.61 8.10 -51.93 -0.42 1.19 16 31 H 0.06 1.27 8.14 -51.93 -0.42 0.84 16 32 H 0.07 1.68 8.11 -51.93 -0.42 1.26 16 33 H 0.26 6.80 8.31 -40.82 -0.34 6.46 16 34 H 0.06 1.09 5.38 -51.93 -0.28 0.81 16 35 H 0.07 1.43 8.10 -51.92 -0.42 1.01 16 36 H 0.16 2.34 7.33 -52.49 -0.38 1.96 16 LS Contribution 331.78 15.07 5.00 5.00 Total: -1.00 -30.66 331.78 -9.36 -40.03 By element: Atomic # 1 Polarization: 2.70 SS G_CDS: -3.87 Total: -1.17 kcal Atomic # 6 Polarization: -17.03 SS G_CDS: -1.76 Total: -18.79 kcal Atomic # 7 Polarization: -44.75 SS G_CDS: 0.22 Total: -44.53 kcal Atomic # 8 Polarization: -42.19 SS G_CDS: -2.12 Total: -44.31 kcal Atomic # 14 Polarization: 20.06 SS G_CDS: -5.02 Total: 15.04 kcal Atomic # 16 Polarization: 51.10 SS G_CDS: -0.60 Total: 50.50 kcal Atomic # 17 Polarization: -0.54 SS G_CDS: -1.22 Total: -1.77 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -30.66 -9.36 -40.03 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000594827099.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.153 kcal (2) G-P(sol) polarization free energy of solvation -30.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.818 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.362 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.027 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds