Wall clock time and date at job start Tue Mar 31 2020 17:14:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.09004 * 109.46976 * 2 1 4 4 N 1.46504 * 109.47298 * 240.00351 * 2 1 3 5 5 C 1.34775 * 119.99994 * 84.99693 * 4 2 1 6 6 O 1.21710 * 120.00090 * 0.02562 * 5 4 2 7 7 C 1.46545 * 119.99572 * 180.02562 * 5 4 2 8 8 C 1.37959 * 126.21833 * 180.02562 * 7 5 4 9 9 C 1.39791 * 107.12753 * 179.97438 * 8 7 5 10 10 Cl 1.73600 * 126.06218 * 179.97438 * 9 8 7 11 11 C 1.35721 * 107.87535 * 359.97438 * 9 8 7 12 12 Cl 1.73595 * 125.58376 * 180.02562 * 11 9 8 13 13 N 1.35658 * 108.82979 * 0.26601 * 11 9 8 14 14 H 0.97003 * 125.69598 * 179.73500 * 13 11 9 15 15 C 1.53002 * 109.47349 * 120.00214 * 2 1 3 16 16 C 1.53947 * 113.73901 * 281.82448 * 15 2 1 17 17 N 1.47808 * 86.03696 * 222.08084 * 16 15 2 18 18 C 1.36936 * 134.45865 * 204.64597 * 17 16 15 19 19 H 1.08003 * 119.99852 * 179.86837 * 18 17 16 20 20 C 1.38807 * 120.00115 * 359.86556 * 18 17 16 21 21 N 1.31623 * 119.99827 * 359.97438 * 20 18 17 22 22 Si 1.86794 * 120.00328 * 180.02562 * 20 18 17 23 23 H 1.48501 * 109.47367 * 59.99832 * 22 20 18 24 24 H 1.48501 * 109.47578 * 179.97438 * 22 20 18 25 25 H 1.48500 * 109.46995 * 300.00101 * 22 20 18 26 26 C 1.47581 * 91.05134 * 24.55141 * 17 16 15 27 27 H 1.09007 * 109.46820 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47363 * 300.07361 * 1 2 3 29 29 H 1.09003 * 109.46739 * 60.07969 * 1 2 3 30 30 H 0.96993 * 119.99804 * 264.99673 * 4 2 1 31 31 H 1.08002 * 126.43674 * 359.92656 * 8 7 5 32 32 H 1.08998 * 112.94183 * 53.41211 * 15 2 1 33 33 H 1.09000 * 113.76759 * 336.34853 * 16 15 2 34 34 H 1.09001 * 113.76829 * 107.73977 * 16 15 2 35 35 H 0.96995 * 120.00075 * 179.97438 * 21 20 18 36 36 H 1.09002 * 113.77156 * 221.15313 * 26 17 16 37 37 H 1.09001 * 113.87330 * 89.76125 * 26 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 7 2.0184 -0.6905 -1.1962 5 6 2.1471 -0.0181 -2.3572 6 8 1.8580 1.1629 -2.4117 7 6 2.6351 -0.7091 -3.5538 8 6 2.8158 -0.1492 -4.8017 9 6 3.2935 -1.1598 -5.6411 10 17 3.6867 -0.9902 -7.3234 11 6 3.3955 -2.2972 -4.9075 12 17 3.9447 -3.8343 -5.4982 13 7 2.9928 -2.0372 -3.6384 14 1 2.9636 -2.6786 -2.9113 15 6 2.0401 -0.7213 1.2492 16 6 1.9744 0.1329 2.5283 17 7 3.3098 -0.4179 2.8417 18 6 4.0193 -0.6144 3.9962 19 1 5.0066 -1.0505 3.9557 20 6 3.4698 -0.2533 5.2186 21 7 2.2668 0.2786 5.2680 22 14 4.4379 -0.5208 6.7936 23 1 5.7078 0.2465 6.7304 24 1 3.6357 -0.0547 7.9531 25 1 4.7403 -1.9663 6.9492 26 6 3.5702 -0.6729 1.4116 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5150 0.8893 29 1 -0.3633 0.5126 -0.8907 30 1 2.2491 -1.6316 -1.1527 31 1 2.6234 0.8769 -5.0783 32 1 1.6176 -1.7193 1.3658 33 1 1.9751 1.2065 2.3401 34 1 1.1953 -0.1777 3.2245 35 1 1.8826 0.5306 6.1222 36 1 4.0628 -1.6258 1.2178 37 1 4.0408 0.1624 0.8930 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000970232065.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:14:21 Heat of formation + Delta-G solvation = 48.240209 kcal Electronic energy + Delta-G solvation = -23027.283585 eV Core-core repulsion = 19279.987881 eV Total energy + Delta-G solvation = -3747.295704 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.060 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.87051 -39.62544 -38.05909 -37.22820 -36.79381 -35.02087 -32.34457 -31.62735 -30.91031 -29.10781 -27.54513 -25.00208 -24.29759 -23.21558 -21.57021 -20.93756 -20.58482 -19.90003 -18.68631 -16.90205 -16.57930 -16.14336 -15.78274 -15.16113 -14.86051 -14.67497 -14.40825 -14.09835 -13.89221 -13.68428 -13.63648 -13.23624 -12.43106 -12.30125 -12.24101 -12.08890 -11.84045 -11.69993 -11.47700 -11.30542 -11.24326 -10.92943 -10.76155 -10.44542 -10.37380 -9.91108 -9.84873 -9.50827 -9.42571 -9.10141 -8.84106 -8.62002 -6.93342 -5.81503 -3.13984 0.84937 1.03606 1.74165 1.84702 2.73916 3.05006 3.09716 3.36357 3.40705 3.41950 4.40393 4.41443 4.51911 4.94903 5.04427 5.09967 5.24832 5.30482 5.46439 5.54188 5.71809 5.78258 5.86912 5.95777 6.02220 6.16491 6.25912 6.33977 6.43178 6.49988 6.54414 6.68027 7.15963 7.28558 7.35844 7.50139 7.93190 8.01017 8.99877 9.66179 10.54299 11.35671 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.021067 B = 0.002366 C = 0.002229 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1328.783686 B =11829.476858 C =12559.357384 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.159 4.159 2 C 0.151 3.849 3 H 0.092 0.908 4 N -0.715 5.715 5 C 0.588 3.412 6 O -0.519 6.519 7 C -0.010 4.010 8 C -0.090 4.090 9 C -0.099 4.099 10 Cl -0.029 7.029 11 C 0.096 3.904 12 Cl 0.003 6.997 13 N -0.521 5.521 14 H 0.428 0.572 15 C -0.149 4.149 16 C 0.177 3.823 17 N -0.611 5.611 18 C -0.226 4.226 19 H 0.079 0.921 20 C -0.007 4.007 21 N -0.921 5.921 22 Si 0.912 3.088 23 H -0.285 1.285 24 H -0.289 1.289 25 H -0.284 1.284 26 C 0.124 3.876 27 H 0.053 0.947 28 H 0.073 0.927 29 H 0.055 0.945 30 H 0.392 0.608 31 H 0.168 0.832 32 H 0.089 0.911 33 H 0.029 0.971 34 H 0.076 0.924 35 H 0.255 0.745 36 H 0.039 0.961 37 H 0.033 0.967 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.200 -6.996 -23.014 24.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.217 4.217 2 C 0.047 3.953 3 H 0.110 0.890 4 N -0.365 5.365 5 C 0.373 3.627 6 O -0.394 6.394 7 C -0.124 4.124 8 C -0.116 4.116 9 C -0.134 4.134 10 Cl -0.001 7.001 11 C -0.048 4.048 12 Cl 0.032 6.968 13 N -0.122 5.122 14 H 0.268 0.732 15 C -0.169 4.169 16 C 0.051 3.949 17 N -0.337 5.337 18 C -0.353 4.353 19 H 0.096 0.904 20 C -0.204 4.204 21 N -0.568 5.568 22 Si 0.743 3.257 23 H -0.212 1.212 24 H -0.215 1.215 25 H -0.211 1.211 26 C -0.002 4.002 27 H 0.073 0.927 28 H 0.092 0.908 29 H 0.074 0.926 30 H 0.225 0.775 31 H 0.186 0.814 32 H 0.107 0.893 33 H 0.047 0.953 34 H 0.094 0.906 35 H 0.065 0.935 36 H 0.057 0.943 37 H 0.050 0.950 Dipole moment (debyes) X Y Z Total from point charges -1.303 -6.315 -22.691 23.589 hybrid contribution 0.841 -1.099 1.036 1.728 sum -0.463 -7.414 -21.655 22.894 Atomic orbital electron populations 1.22121 0.95070 1.01910 1.02596 1.21223 0.94027 0.97609 0.82446 0.88961 1.46060 1.66826 1.13631 1.09935 1.16807 0.78118 0.86325 0.81423 1.90890 1.50147 1.14321 1.84070 1.20621 1.11988 0.82684 0.97137 1.21160 1.01298 0.99803 0.89319 1.19612 1.12510 0.93198 0.88039 1.98353 1.92850 1.97673 1.11187 1.20571 1.08679 0.89573 0.85974 1.98433 1.87548 1.25052 1.85786 1.41915 1.50539 1.10455 1.09333 0.73157 1.23895 0.97622 1.00818 0.94526 1.22229 0.89665 0.93919 0.89118 1.45965 1.16320 1.71895 0.99564 1.18965 0.98487 1.35083 0.82795 0.90366 1.24783 0.97063 1.00993 0.97528 1.69789 1.15345 1.47085 1.24601 0.86199 0.78916 0.77832 0.82794 1.21167 1.21491 1.21089 1.22540 0.92932 0.97648 0.87048 0.92741 0.90776 0.92607 0.77451 0.81422 0.89308 0.95281 0.90611 0.93507 0.94302 0.94953 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.03 9.44 37.16 0.35 -1.68 16 2 C 0.15 2.11 2.29 -67.93 -0.16 1.96 16 3 H 0.09 1.51 7.48 -51.93 -0.39 1.12 16 4 N -0.71 -8.09 4.94 -55.15 -0.27 -8.37 16 5 C 0.59 7.39 7.75 -12.91 -0.10 7.29 16 6 O -0.52 -8.39 16.54 5.18 0.09 -8.31 16 7 C -0.01 -0.11 7.06 -81.94 -0.58 -0.68 16 8 C -0.09 -0.93 10.64 -39.10 -0.42 -1.34 16 9 C -0.10 -0.96 6.66 -39.90 -0.27 -1.23 16 10 Cl -0.03 -0.27 29.12 -51.86 -1.51 -1.78 16 11 C 0.10 0.84 7.75 -16.76 -0.13 0.71 16 12 Cl 0.00 0.03 29.13 -51.86 -1.51 -1.48 16 13 N -0.52 -4.11 6.00 -6.51 -0.04 -4.14 16 14 H 0.43 2.23 8.19 -40.82 -0.33 1.90 16 15 C -0.15 -2.46 3.35 -89.69 -0.30 -2.76 16 16 C 0.18 3.92 6.98 -2.84 -0.02 3.90 16 17 N -0.61 -15.22 3.70 -177.71 -0.66 -15.87 16 18 C -0.23 -6.24 10.70 -15.06 -0.16 -6.41 16 19 H 0.08 2.09 7.83 -52.48 -0.41 1.68 16 20 C -0.01 -0.20 5.50 -17.43 -0.10 -0.29 16 21 N -0.92 -26.85 11.39 55.49 0.63 -26.22 16 22 Si 0.91 21.87 29.55 -169.99 -5.02 16.85 16 23 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 24 H -0.29 -6.98 7.11 56.52 0.40 -6.57 16 25 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 26 C 0.12 2.38 8.38 -2.97 -0.02 2.36 16 27 H 0.05 0.62 8.14 -51.93 -0.42 0.20 16 28 H 0.07 0.98 8.09 -51.93 -0.42 0.56 16 29 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 30 H 0.39 3.36 7.73 -40.82 -0.32 3.04 16 31 H 0.17 1.64 8.06 -52.49 -0.42 1.22 16 32 H 0.09 1.40 8.14 -51.93 -0.42 0.98 16 33 H 0.03 0.67 8.03 -51.93 -0.42 0.25 16 34 H 0.08 1.86 7.17 -51.93 -0.37 1.49 16 35 H 0.25 7.22 8.31 -40.82 -0.34 6.88 16 36 H 0.04 0.69 8.14 -51.93 -0.42 0.27 16 37 H 0.03 0.63 8.10 -51.93 -0.42 0.21 16 LS Contribution 349.74 15.07 5.27 5.27 Total: -1.00 -32.08 349.74 -9.25 -41.33 By element: Atomic # 1 Polarization: 5.21 SS G_CDS: -4.33 Total: 0.89 kcal Atomic # 6 Polarization: 3.73 SS G_CDS: -1.90 Total: 1.83 kcal Atomic # 7 Polarization: -54.26 SS G_CDS: -0.34 Total: -54.60 kcal Atomic # 8 Polarization: -8.39 SS G_CDS: 0.09 Total: -8.31 kcal Atomic # 14 Polarization: 21.87 SS G_CDS: -5.02 Total: 16.85 kcal Atomic # 17 Polarization: -0.24 SS G_CDS: -3.02 Total: -3.26 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -32.08 -9.25 -41.33 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000970232065.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 89.575 kcal (2) G-P(sol) polarization free energy of solvation -32.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 57.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.250 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.334 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds