Wall clock time and date at job start Tue Mar 31 2020 17:13:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09005 * 110.00038 * 2 1 4 4 C 1.54323 * 109.88400 * 121.09803 * 2 1 3 5 5 H 1.09001 * 110.87034 * 23.17573 * 4 2 1 6 6 N 1.46498 * 110.71906 * 259.97461 * 4 2 1 7 7 C 1.36940 * 119.99856 * 160.02638 * 6 4 2 8 8 H 1.08000 * 120.00079 * 359.97438 * 7 6 4 9 9 C 1.38812 * 119.99819 * 179.97438 * 7 6 4 10 10 N 1.31619 * 120.00007 * 359.97438 * 9 7 6 11 11 Si 1.86794 * 119.99723 * 179.97438 * 9 7 6 12 12 H 1.48500 * 109.47261 * 180.02562 * 11 9 7 13 13 H 1.48503 * 109.47346 * 60.00340 * 11 9 7 14 14 H 1.48501 * 109.47718 * 300.00087 * 11 9 7 15 15 C 1.55157 * 102.94068 * 141.61117 * 4 2 1 16 16 C 1.54914 * 101.58137 * 324.49585 * 15 4 2 17 17 N 1.47018 * 109.88123 * 238.90935 * 2 1 3 18 18 C 1.34778 * 125.65245 * 61.60673 * 17 2 1 19 19 O 1.21712 * 119.99805 * 358.13171 * 18 17 2 20 20 C 1.46544 * 120.00016 * 178.13156 * 18 17 2 21 21 C 1.37956 * 126.21849 * 187.68234 * 20 18 17 22 22 C 1.39803 * 107.12521 * 179.90518 * 21 20 18 23 23 Cl 1.73599 * 126.05959 * 180.13603 * 22 21 20 24 24 C 1.35716 * 107.87341 * 0.36598 * 22 21 20 25 25 Cl 1.73604 * 125.58136 * 179.81316 * 24 22 21 26 26 N 1.35660 * 108.83359 * 359.77254 * 24 22 21 27 27 H 0.97004 * 125.69834 * 179.97438 * 26 24 22 28 28 H 1.09000 * 109.46643 * 298.90427 * 1 2 3 29 29 H 1.09004 * 109.47022 * 58.89981 * 1 2 3 30 30 H 1.08998 * 109.47002 * 178.90282 * 1 2 3 31 31 H 0.97004 * 120.00091 * 340.02096 * 6 4 2 32 32 H 0.96996 * 119.99886 * 359.97438 * 10 9 7 33 33 H 1.08992 * 111.00617 * 82.57406 * 15 4 2 34 34 H 1.09007 * 111.00050 * 206.42278 * 15 4 2 35 35 H 1.08995 * 110.36132 * 155.84958 * 16 15 4 36 36 H 1.09000 * 110.36959 * 278.17357 * 16 15 4 37 37 H 1.07998 * 126.44034 * 0.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9028 1.0243 0.0000 4 6 2.0549 -0.7496 1.2427 5 1 1.3065 -1.4459 1.6210 6 7 2.4555 0.1960 2.2875 7 6 2.5576 -0.2227 3.5873 8 1 2.3424 -1.2499 3.8422 9 6 2.9377 0.6731 4.5772 10 7 3.2004 1.9248 4.2664 11 14 3.0763 0.1021 6.3503 12 1 3.4951 1.2413 7.2059 13 1 4.0846 -0.9842 6.4432 14 1 1.7588 -0.4046 6.8117 15 6 3.2876 -1.5142 0.6922 16 6 2.8145 -1.8794 -0.7369 17 7 2.0300 -0.7139 -1.1840 18 6 1.8074 -0.3619 -2.4658 19 8 1.1127 0.6048 -2.7194 20 6 2.4017 -1.1429 -3.5539 21 6 2.3841 -0.8179 -4.8946 22 6 3.0649 -1.8331 -5.5732 23 17 3.3361 -1.9134 -7.2860 24 6 3.4717 -2.7470 -4.6561 25 17 4.3564 -4.2001 -5.0019 26 7 3.0745 -2.3387 -3.4249 27 1 3.2366 -2.8099 -2.5927 28 1 -0.3632 0.4967 0.8997 29 1 -0.3633 0.5308 -0.8800 30 1 -0.3633 -1.0275 -0.0197 31 1 2.6485 1.1187 2.0585 32 1 3.1288 2.2212 3.3456 33 1 4.1654 -0.8689 0.6603 34 1 3.4852 -2.4111 1.2795 35 1 3.6716 -2.0337 -1.3923 36 1 2.1886 -2.7714 -0.7130 37 1 1.9314 0.0573 -5.3366 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000986626689.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:13:54 Heat of formation + Delta-G solvation = 26.344053 kcal Electronic energy + Delta-G solvation = -23606.491463 eV Core-core repulsion = 19858.246270 eV Total energy + Delta-G solvation = -3748.245193 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.060 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.96408 -39.85499 -37.68176 -37.19438 -36.78009 -34.63691 -32.31464 -31.43853 -31.12502 -29.76647 -28.62898 -25.33934 -24.00421 -23.36296 -21.71083 -21.36513 -20.73568 -20.07309 -18.03867 -17.55524 -16.82490 -16.31562 -15.66556 -15.30537 -14.95607 -14.82264 -14.29284 -14.02875 -13.76948 -13.69289 -13.65278 -13.15879 -13.00449 -12.51769 -12.32000 -12.28195 -12.07486 -11.88066 -11.78586 -11.44153 -11.21284 -11.11491 -10.76143 -10.69142 -10.42389 -10.15639 -10.05869 -9.40673 -9.31909 -9.07066 -8.84614 -8.55113 -7.22853 -6.23718 -3.26949 0.87997 1.06575 1.76862 1.86320 2.61941 2.97403 3.07393 3.44093 3.46765 3.64816 4.17074 4.48708 4.52136 4.56558 4.86410 4.90558 5.01111 5.14131 5.25707 5.27262 5.49368 5.52834 5.64338 5.76813 5.81679 5.84634 6.01313 6.04525 6.19260 6.30611 6.39683 6.43271 6.55756 6.65805 7.34444 7.65373 7.94641 8.60911 9.03842 9.90584 10.03314 11.23821 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.023404 B = 0.002642 C = 0.002463 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1196.074176 B =10596.807826 C =11366.083797 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.128 3.872 3 H 0.080 0.920 4 C 0.183 3.817 5 H 0.069 0.931 6 N -0.725 5.725 7 C -0.339 4.339 8 H 0.067 0.933 9 C -0.039 4.039 10 N -0.938 5.938 11 Si 1.080 2.920 12 H -0.284 1.284 13 H -0.294 1.294 14 H -0.294 1.294 15 C -0.152 4.152 16 C 0.082 3.918 17 N -0.606 5.606 18 C 0.602 3.398 19 O -0.518 6.518 20 C -0.006 4.006 21 C -0.090 4.090 22 C -0.098 4.098 23 Cl -0.030 7.030 24 C 0.092 3.908 25 Cl 0.002 6.998 26 N -0.525 5.525 27 H 0.430 0.570 28 H 0.072 0.928 29 H 0.065 0.935 30 H 0.052 0.948 31 H 0.369 0.631 32 H 0.256 0.744 33 H 0.078 0.922 34 H 0.081 0.919 35 H 0.064 0.936 36 H 0.073 0.927 37 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.337 -12.307 -19.331 22.919 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.214 4.214 2 C 0.025 3.975 3 H 0.098 0.902 4 C 0.071 3.929 5 H 0.087 0.913 6 N -0.366 5.366 7 C -0.470 4.470 8 H 0.085 0.915 9 C -0.238 4.238 10 N -0.582 5.582 11 Si 0.910 3.090 12 H -0.210 1.210 13 H -0.222 1.222 14 H -0.221 1.221 15 C -0.194 4.194 16 C -0.042 4.042 17 N -0.340 5.340 18 C 0.390 3.610 19 O -0.394 6.394 20 C -0.120 4.120 21 C -0.116 4.116 22 C -0.133 4.133 23 Cl -0.001 7.001 24 C -0.053 4.053 25 Cl 0.031 6.969 26 N -0.133 5.133 27 H 0.277 0.723 28 H 0.091 0.909 29 H 0.084 0.916 30 H 0.071 0.929 31 H 0.204 0.796 32 H 0.068 0.932 33 H 0.097 0.903 34 H 0.100 0.900 35 H 0.082 0.918 36 H 0.091 0.909 37 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 0.370 -11.665 -17.850 21.327 hybrid contribution 0.109 -0.899 -1.516 1.766 sum 0.479 -12.564 -19.366 23.089 Atomic orbital electron populations 1.22064 0.94301 1.01922 1.03085 1.21989 0.94864 0.96836 0.83807 0.90178 1.21169 0.93389 0.91515 0.86814 0.91336 1.42347 1.81989 1.08396 1.03887 1.19978 1.45153 0.97065 0.84772 0.91522 1.25818 0.99215 0.94404 1.04327 1.70892 1.51124 1.15841 1.20332 0.83244 0.75946 0.74900 0.74870 1.20954 1.22174 1.22128 1.23584 1.01740 1.02219 0.91835 1.22671 0.94171 0.89101 0.98216 1.48481 1.51935 1.28537 1.05008 1.16433 0.80718 0.83769 0.80102 1.90873 1.38457 1.27412 1.82658 1.20490 1.06393 0.89449 0.95690 1.21132 1.01036 0.99742 0.89736 1.19614 1.09425 0.98091 0.86139 1.98349 1.95528 1.98173 1.08063 1.20652 1.05261 0.93222 0.86124 1.98427 1.72733 1.32142 1.93605 1.42877 1.43187 1.19188 1.08022 0.72296 0.90910 0.91585 0.92890 0.79640 0.93236 0.90343 0.90012 0.91790 0.90926 0.81418 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.40 9.10 37.16 0.34 -2.07 16 2 C 0.13 2.08 3.22 -66.96 -0.22 1.86 16 3 H 0.08 1.46 7.69 -51.93 -0.40 1.06 16 4 C 0.18 3.24 3.11 -66.10 -0.21 3.04 16 5 H 0.07 1.23 7.84 -51.93 -0.41 0.82 16 6 N -0.72 -16.62 5.25 -51.65 -0.27 -16.89 16 7 C -0.34 -8.83 9.98 -15.06 -0.15 -8.98 16 8 H 0.07 1.69 7.83 -52.49 -0.41 1.28 16 9 C -0.04 -1.08 5.50 -17.43 -0.10 -1.18 16 10 N -0.94 -27.84 13.70 55.49 0.76 -27.08 16 11 Si 1.08 24.65 29.92 -169.99 -5.09 19.57 16 12 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 13 H -0.29 -6.39 7.11 56.52 0.40 -5.99 16 14 H -0.29 -6.41 7.11 56.52 0.40 -6.01 16 15 C -0.15 -2.24 6.77 -24.58 -0.17 -2.41 16 16 C 0.08 0.93 5.45 -2.53 -0.01 0.91 16 17 N -0.61 -8.48 3.06 -164.59 -0.50 -8.98 16 18 C 0.60 8.81 7.62 -12.91 -0.10 8.71 16 19 O -0.52 -9.09 15.87 5.18 0.08 -9.01 16 20 C -0.01 -0.07 6.84 -81.94 -0.56 -0.64 16 21 C -0.09 -1.03 10.65 -39.10 -0.42 -1.45 16 22 C -0.10 -1.04 6.66 -39.90 -0.27 -1.31 16 23 Cl -0.03 -0.29 29.12 -51.86 -1.51 -1.80 16 24 C 0.09 0.91 7.75 -16.76 -0.13 0.78 16 25 Cl 0.00 0.02 29.13 -51.86 -1.51 -1.49 16 26 N -0.53 -5.15 5.39 -6.51 -0.04 -5.18 16 27 H 0.43 3.44 5.22 -40.82 -0.21 3.22 16 28 H 0.07 1.17 8.14 -51.93 -0.42 0.75 16 29 H 0.07 1.06 6.84 -51.93 -0.36 0.70 16 30 H 0.05 0.75 8.14 -51.93 -0.42 0.32 16 31 H 0.37 8.94 6.34 -40.82 -0.26 8.69 16 32 H 0.26 7.49 6.77 -40.82 -0.28 7.22 16 33 H 0.08 1.29 8.14 -51.93 -0.42 0.86 16 34 H 0.08 1.14 8.14 -51.93 -0.42 0.71 16 35 H 0.06 0.60 5.54 -51.93 -0.29 0.31 16 36 H 0.07 0.67 8.11 -51.93 -0.42 0.25 16 37 H 0.17 1.79 8.06 -52.49 -0.42 1.37 16 LS Contribution 338.20 15.07 5.10 5.10 Total: -1.00 -30.30 338.20 -8.90 -39.20 By element: Atomic # 1 Polarization: 13.23 SS G_CDS: -3.94 Total: 9.29 kcal Atomic # 6 Polarization: -0.74 SS G_CDS: -1.98 Total: -2.72 kcal Atomic # 7 Polarization: -58.09 SS G_CDS: -0.05 Total: -58.14 kcal Atomic # 8 Polarization: -9.09 SS G_CDS: 0.08 Total: -9.01 kcal Atomic # 14 Polarization: 24.65 SS G_CDS: -5.09 Total: 19.57 kcal Atomic # 17 Polarization: -0.27 SS G_CDS: -3.02 Total: -3.29 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -30.30 -8.90 -39.20 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000986626689.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 65.544 kcal (2) G-P(sol) polarization free energy of solvation -30.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 35.241 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.200 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds