Wall clock time and date at job start Tue Mar 31 2020 17:22:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.35663 * 125.69442 * 2 1 4 4 Cl 1.73597 * 125.58385 * 359.97345 * 3 2 1 5 5 C 1.35723 * 108.82849 * 179.97438 * 3 2 1 6 6 Cl 1.73600 * 126.06070 * 179.97438 * 5 3 2 7 7 C 1.39785 * 107.87598 * 0.22493 * 5 3 2 8 8 C 1.37799 * 125.69083 * 179.97438 * 2 1 3 9 9 C 1.46542 * 126.22666 * 0.02562 * 8 2 1 10 10 O 1.21719 * 119.99931 * 5.36715 * 9 8 2 11 11 N 1.34778 * 120.00073 * 185.36299 * 9 8 2 12 12 C 1.46499 * 119.99794 * 185.18066 * 11 9 8 13 13 H 1.09000 * 110.89147 * 31.11431 * 12 11 9 14 14 C 1.55158 * 111.00762 * 155.00047 * 12 11 9 15 15 C 1.54320 * 102.94429 * 153.57118 * 14 12 11 16 16 N 1.47017 * 107.27178 * 337.81053 * 15 14 12 17 17 C 1.36938 * 125.64535 * 178.92265 * 16 15 14 18 18 H 1.08003 * 120.00107 * 180.02562 * 17 16 15 19 19 C 1.38810 * 120.00453 * 0.02562 * 17 16 15 20 20 N 1.31622 * 119.99654 * 359.97438 * 19 17 16 21 21 Si 1.86800 * 120.00341 * 180.02562 * 19 17 16 22 22 H 1.48499 * 109.47026 * 359.97438 * 21 19 17 23 23 H 1.48505 * 109.47237 * 119.99603 * 21 19 17 24 24 H 1.48496 * 109.47281 * 239.99738 * 21 19 17 25 25 C 1.47425 * 108.70619 * 358.93800 * 16 15 14 26 26 H 1.08998 * 109.46658 * 85.90457 * 1 2 3 27 27 H 1.08996 * 109.47579 * 205.90145 * 1 2 3 28 28 H 1.09005 * 109.46898 * 325.90882 * 1 2 3 29 29 H 1.08001 * 126.44180 * 179.77304 * 7 5 3 30 30 H 0.96999 * 120.00357 * 5.17544 * 11 9 8 31 31 H 1.09001 * 110.71660 * 271.93875 * 14 12 11 32 32 H 1.09003 * 110.72002 * 35.02947 * 14 12 11 33 33 H 1.09007 * 109.88017 * 97.22786 * 15 14 12 34 34 H 1.09001 * 109.88431 * 218.38602 * 15 14 12 35 35 H 0.97006 * 119.99992 * 180.02562 * 20 19 17 36 36 H 1.09003 * 110.36457 * 265.29252 * 25 16 15 37 37 H 1.08991 * 110.36575 * 142.97147 * 25 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2566 1.1018 0.0000 4 17 1.6994 2.7459 -0.0007 5 6 3.5555 0.7080 0.0006 6 17 4.9405 1.7545 0.0002 7 6 3.5801 -0.6896 -0.0043 8 6 2.2690 -1.1192 0.0005 9 6 1.8141 -2.5122 0.0006 10 8 0.6276 -2.7650 -0.0984 11 7 2.7096 -3.5135 0.1102 12 6 2.2689 -4.9060 -0.0035 13 1 1.4137 -4.9895 -0.6742 14 6 3.4321 -5.8213 -0.4690 15 6 3.0411 -7.1979 0.1087 16 7 2.1206 -6.9556 1.2292 17 6 1.5261 -7.9213 1.9967 18 1 0.8619 -7.6395 2.8003 19 6 1.7771 -9.2626 1.7420 20 7 2.5862 -9.6061 0.7622 21 14 0.9656 -10.5799 2.7885 22 1 0.1075 -9.9370 3.8159 23 1 0.1330 -11.4552 1.9248 24 1 2.0114 -11.3949 3.4573 25 6 1.9433 -5.5008 1.3893 26 1 -0.3632 0.0734 -1.0250 27 1 -0.3634 -0.9244 0.4489 28 1 -0.3633 0.8511 0.5760 29 1 4.4601 -1.3157 -0.0086 30 1 3.6459 -3.3122 0.2643 31 1 3.4810 -5.8595 -1.5572 32 1 4.3806 -5.4810 -0.0534 33 1 2.5443 -7.7937 -0.6571 34 1 3.9310 -7.7165 0.4654 35 1 2.7613 -10.5434 0.5839 36 1 2.6351 -5.1145 2.1379 37 1 0.9148 -5.2725 1.6684 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001014635623.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:22:47 Heat of formation + Delta-G solvation = 31.095092 kcal Electronic energy + Delta-G solvation = -23256.346508 eV Core-core repulsion = 19508.307336 eV Total energy + Delta-G solvation = -3748.039172 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.060 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -41.88767 -39.37215 -37.31962 -37.09162 -36.74961 -34.37779 -33.13972 -31.95328 -29.81922 -29.00544 -27.03626 -26.92226 -24.62071 -23.00236 -21.32252 -20.47711 -20.20146 -19.80889 -18.33857 -16.97944 -16.50129 -16.28767 -15.98334 -14.90751 -14.68601 -14.60910 -14.54612 -13.98623 -13.93468 -13.72548 -13.43652 -12.95488 -12.58501 -12.46768 -12.32192 -12.21146 -11.86149 -11.77460 -11.69751 -11.22851 -11.08566 -10.94715 -10.80903 -10.43139 -10.10245 -9.97361 -9.95234 -9.73598 -9.15052 -8.95168 -8.63325 -8.51250 -6.87104 -5.74022 -3.07715 0.94882 1.10560 1.75413 1.88622 2.53584 3.14493 3.26164 3.39610 3.45524 3.47758 4.36445 4.45025 4.52811 4.67827 4.90777 5.08356 5.20041 5.28538 5.37203 5.40656 5.56281 5.67210 5.73403 5.84393 6.09736 6.20930 6.25474 6.36305 6.37146 6.48936 6.63518 6.87789 7.47923 7.53996 7.54701 7.78890 8.12642 8.22691 9.19202 9.78977 10.43245 11.37930 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.026241 B = 0.002410 C = 0.002286 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1066.760450 B =11614.706782 C =12247.291610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.394 5.394 3 C 0.087 3.913 4 Cl 0.000 7.000 5 C -0.096 4.096 6 Cl -0.032 7.032 7 C -0.124 4.124 8 C -0.008 4.008 9 C 0.587 3.413 10 O -0.539 6.539 11 N -0.698 5.698 12 C 0.129 3.871 13 H 0.099 0.901 14 C -0.149 4.149 15 C 0.179 3.821 16 N -0.604 5.604 17 C -0.227 4.227 18 H 0.079 0.921 19 C -0.009 4.009 20 N -0.923 5.923 21 Si 0.913 3.087 22 H -0.280 1.280 23 H -0.290 1.290 24 H -0.290 1.290 25 C 0.130 3.870 26 H 0.086 0.914 27 H 0.117 0.883 28 H 0.086 0.914 29 H 0.165 0.835 30 H 0.401 0.599 31 H 0.067 0.933 32 H 0.063 0.937 33 H 0.050 0.950 34 H 0.047 0.953 35 H 0.252 0.748 36 H 0.021 0.979 37 H 0.044 0.956 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.260 24.175 -3.817 24.578 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 N -0.069 5.069 3 C -0.057 4.057 4 Cl 0.029 6.971 5 C -0.131 4.131 6 Cl -0.004 7.004 7 C -0.150 4.150 8 C -0.123 4.123 9 C 0.373 3.627 10 O -0.418 6.418 11 N -0.348 5.348 12 C 0.025 3.975 13 H 0.117 0.883 14 C -0.188 4.188 15 C 0.054 3.946 16 N -0.331 5.331 17 C -0.355 4.355 18 H 0.097 0.903 19 C -0.205 4.205 20 N -0.571 5.571 21 Si 0.744 3.256 22 H -0.205 1.205 23 H -0.217 1.217 24 H -0.217 1.217 25 C 0.002 3.998 26 H 0.104 0.896 27 H 0.135 0.865 28 H 0.105 0.895 29 H 0.182 0.818 30 H 0.236 0.764 31 H 0.086 0.914 32 H 0.082 0.918 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.063 0.937 36 H 0.039 0.961 37 H 0.062 0.938 Dipole moment (debyes) X Y Z Total from point charges 1.058 23.941 -3.890 24.278 hybrid contribution 0.131 -0.224 0.572 0.628 sum 1.188 23.718 -3.318 23.978 Atomic orbital electron populations 1.22509 0.74351 1.06493 1.04732 1.43771 1.07559 1.03284 1.52275 1.20574 0.88989 0.82520 1.13579 1.98405 1.89902 1.11652 1.97190 1.19539 0.86428 0.91631 1.15467 1.98346 1.39317 1.65217 1.97477 1.21204 0.95726 0.92337 1.05696 1.20188 0.89161 0.87849 1.15095 1.16727 0.86011 0.82776 0.77194 1.90828 1.15876 1.84395 1.50675 1.45689 1.10933 1.06099 1.72040 1.22414 0.98448 0.77155 0.99516 0.88297 1.23208 0.96652 0.98430 1.00540 1.21159 0.94078 0.89428 0.89958 1.44396 1.53199 0.99125 1.36360 1.19111 1.21367 0.85435 1.09562 0.90317 1.24807 0.99873 0.97003 0.98778 1.69954 1.39551 1.15856 1.31706 0.86022 0.78493 0.81792 0.79334 1.20484 1.21714 1.21740 1.21820 0.98686 0.86078 0.93211 0.89595 0.86460 0.89514 0.81787 0.76357 0.91429 0.91823 0.93156 0.93453 0.93750 0.96129 0.93789 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.53 10.43 59.85 0.62 1.16 16 2 N -0.39 -4.31 3.17 -116.64 -0.37 -4.68 16 3 C 0.09 0.91 7.39 -16.76 -0.12 0.79 16 4 Cl 0.00 0.00 28.59 -51.86 -1.48 -1.48 16 5 C -0.10 -1.01 6.66 -39.90 -0.27 -1.27 16 6 Cl -0.03 -0.31 29.12 -51.86 -1.51 -1.82 16 7 C -0.12 -1.25 10.33 -39.10 -0.40 -1.65 16 8 C -0.01 -0.09 6.89 -81.94 -0.56 -0.66 16 9 C 0.59 8.23 7.76 -12.91 -0.10 8.13 16 10 O -0.54 -9.16 14.34 5.17 0.07 -9.09 16 11 N -0.70 -9.27 5.17 -53.07 -0.27 -9.54 16 12 C 0.13 2.20 3.38 -65.78 -0.22 1.97 16 13 H 0.10 1.85 7.62 -51.93 -0.40 1.45 16 14 C -0.15 -2.52 6.60 -24.90 -0.16 -2.69 16 15 C 0.18 4.15 5.37 -3.07 -0.02 4.13 16 16 N -0.60 -15.21 3.39 -170.07 -0.58 -15.78 16 17 C -0.23 -6.29 10.28 -15.06 -0.15 -6.45 16 18 H 0.08 2.13 7.83 -52.48 -0.41 1.72 16 19 C -0.01 -0.24 5.49 -17.43 -0.10 -0.33 16 20 N -0.92 -26.70 10.31 55.49 0.57 -26.13 16 21 Si 0.91 22.02 29.55 -169.99 -5.02 16.99 16 22 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 23 H -0.29 -7.04 7.11 56.52 0.40 -6.64 16 24 H -0.29 -7.02 7.11 56.52 0.40 -6.62 16 25 C 0.13 2.68 6.93 -2.53 -0.02 2.66 16 26 H 0.09 0.69 8.14 -51.93 -0.42 0.26 16 27 H 0.12 1.25 6.21 -51.93 -0.32 0.92 16 28 H 0.09 0.60 7.88 -51.93 -0.41 0.19 16 29 H 0.16 1.24 7.49 -52.49 -0.39 0.85 16 30 H 0.40 4.16 7.51 -40.82 -0.31 3.86 16 31 H 0.07 1.03 8.14 -51.93 -0.42 0.60 16 32 H 0.06 0.94 8.00 -51.93 -0.42 0.53 16 33 H 0.05 1.30 7.38 -51.93 -0.38 0.92 16 34 H 0.05 1.21 7.51 -51.93 -0.39 0.82 16 35 H 0.25 7.08 8.31 -40.82 -0.34 6.74 16 36 H 0.02 0.42 8.14 -51.93 -0.42 0.00 16 37 H 0.04 0.95 8.14 -51.93 -0.42 0.53 16 LS Contribution 340.79 15.07 5.14 5.14 Total: -1.00 -31.42 340.79 -9.21 -40.64 By element: Atomic # 1 Polarization: 4.22 SS G_CDS: -4.25 Total: -0.03 kcal Atomic # 6 Polarization: 7.30 SS G_CDS: -1.51 Total: 5.79 kcal Atomic # 7 Polarization: -55.49 SS G_CDS: -0.65 Total: -56.14 kcal Atomic # 8 Polarization: -9.16 SS G_CDS: 0.07 Total: -9.09 kcal Atomic # 14 Polarization: 22.02 SS G_CDS: -5.02 Total: 16.99 kcal Atomic # 17 Polarization: -0.31 SS G_CDS: -2.99 Total: -3.30 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -31.42 -9.21 -40.64 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001014635623.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 71.730 kcal (2) G-P(sol) polarization free energy of solvation -31.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.308 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.213 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.635 kcal (6) G-S(sol) free energy of system = (1) + (5) 31.095 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds