Wall clock time and date at job start Tue Mar 31 2020 17:22:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.35671 * 125.69229 * 2 1 4 4 Cl 1.73601 * 125.58419 * 0.02562 * 3 2 1 5 5 C 1.35716 * 108.82548 * 180.02562 * 3 2 1 6 6 Cl 1.73610 * 126.05956 * 179.97438 * 5 3 2 7 7 C 1.39788 * 107.88020 * 359.76243 * 5 3 2 8 8 C 1.37809 * 125.69655 * 180.02562 * 2 1 3 9 9 C 1.46539 * 126.22224 * 359.95699 * 8 2 1 10 10 O 1.21716 * 120.00178 * 4.10797 * 9 8 2 11 11 N 1.34773 * 119.99861 * 184.10465 * 9 8 2 12 12 C 1.46506 * 119.99632 * 174.83839 * 11 9 8 13 13 C 1.53004 * 109.46991 * 180.02562 * 12 11 9 14 14 H 1.09001 * 112.73643 * 56.23654 * 13 12 11 15 15 C 1.53492 * 113.46858 * 187.05979 * 13 12 11 16 16 C 1.53498 * 83.34496 * 140.84842 * 15 13 12 17 17 N 1.47068 * 113.46780 * 285.50148 * 13 12 11 18 18 C 1.36940 * 136.06143 * 37.83134 * 17 13 12 19 19 H 1.07998 * 119.99669 * 0.02562 * 18 17 13 20 20 C 1.38808 * 120.00146 * 180.02562 * 18 17 13 21 21 N 1.31617 * 120.00018 * 0.02562 * 20 18 17 22 22 Si 1.86799 * 119.99982 * 179.97438 * 20 18 17 23 23 H 1.48506 * 109.46557 * 90.00424 * 22 20 18 24 24 H 1.48495 * 109.47345 * 210.00213 * 22 20 18 25 25 H 1.48498 * 109.47141 * 330.00464 * 22 20 18 26 26 H 1.08994 * 109.46877 * 265.07862 * 1 2 3 27 27 H 1.08999 * 109.47217 * 25.08030 * 1 2 3 28 28 H 1.08998 * 109.47213 * 145.07875 * 1 2 3 29 29 H 1.08002 * 126.43319 * 180.24050 * 7 5 3 30 30 H 0.96991 * 120.00283 * 354.84240 * 11 9 8 31 31 H 1.09001 * 109.46899 * 60.00578 * 12 11 9 32 32 H 1.08993 * 109.47460 * 299.99582 * 12 11 9 33 33 H 1.08995 * 114.20509 * 254.43303 * 15 13 12 34 34 H 1.09000 * 114.20604 * 27.06773 * 15 13 12 35 35 H 1.08997 * 113.47386 * 219.15697 * 16 15 13 36 36 H 1.08998 * 113.46930 * 88.70765 * 16 15 13 37 37 H 0.97000 * 120.00299 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2566 1.1019 0.0000 4 17 1.6993 2.7460 0.0006 5 6 3.5554 0.7081 -0.0006 6 17 4.9405 1.7547 -0.0014 7 6 3.5801 -0.6896 0.0046 8 6 2.2692 -1.1192 -0.0005 9 6 1.8144 -2.5122 -0.0002 10 8 0.6260 -2.7644 -0.0750 11 7 2.7120 -3.5141 0.0828 12 6 2.2533 -4.9008 0.1971 13 6 3.4637 -5.8335 0.2751 14 1 4.1381 -5.5809 1.0933 15 6 3.0927 -7.3220 0.2242 16 6 4.3526 -7.4228 -0.6469 17 7 4.1486 -6.0133 -1.0139 18 6 4.4557 -5.2194 -2.0866 19 1 4.1671 -4.1787 -2.0883 20 6 5.1378 -5.7523 -3.1717 21 7 5.4891 -7.0207 -3.1699 22 14 5.5561 -4.6694 -4.6353 23 1 6.8858 -4.0431 -4.4235 24 1 5.5887 -5.4954 -5.8689 25 1 4.5262 -3.6089 -4.7767 26 1 -0.3633 -0.0882 1.0238 27 1 -0.3633 0.9308 -0.4356 28 1 -0.3633 -0.8426 -0.5883 29 1 4.4602 -1.3155 0.0092 30 1 3.6615 -3.3171 0.0669 31 1 1.6520 -5.1576 -0.6750 32 1 1.6514 -5.0113 1.0989 33 1 3.1701 -7.8349 1.1829 34 1 2.1626 -7.5330 -0.3035 35 1 4.2461 -8.1097 -1.4864 36 1 5.2638 -7.5946 -0.0740 37 1 5.9654 -7.3932 -3.9283 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001038329921.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:22:36 Heat of formation + Delta-G solvation = 60.750822 kcal Electronic energy + Delta-G solvation = -23612.901966 eV Core-core repulsion = 19866.148763 eV Total energy + Delta-G solvation = -3746.753203 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.060 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -41.72270 -39.19369 -38.04168 -37.03344 -36.60187 -34.43133 -32.96243 -32.24205 -29.88340 -28.04438 -27.31299 -26.79499 -23.51025 -23.16068 -21.79457 -20.88850 -19.94264 -19.22890 -18.24042 -16.79858 -16.26403 -16.09931 -15.82947 -15.27579 -14.70809 -14.48549 -14.35135 -13.93600 -13.76939 -13.67341 -13.32864 -13.25315 -12.99689 -12.47641 -12.11699 -11.98480 -11.64662 -11.59609 -11.52729 -11.16427 -11.06825 -11.01706 -10.78221 -10.61283 -10.10649 -9.86659 -9.85295 -9.32070 -8.98152 -8.84080 -8.79302 -8.34516 -6.93966 -5.80028 -3.13078 1.10361 1.22804 1.90948 2.05995 2.69207 3.32175 3.37402 3.43449 3.44515 3.47320 4.40453 4.48868 4.67077 4.81977 5.00319 5.14455 5.24157 5.35094 5.41064 5.49365 5.56185 5.65080 5.85852 5.99520 6.03040 6.25064 6.34493 6.37009 6.51341 6.54562 6.62373 6.75702 7.18789 7.34483 7.54409 7.69530 7.94035 8.29926 8.99374 9.67183 10.58609 11.36976 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.012811 B = 0.003657 C = 0.003164 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2185.065273 B = 7654.846346 C = 8848.468830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.396 5.396 3 C 0.086 3.914 4 Cl -0.002 7.002 5 C -0.095 4.095 6 Cl -0.032 7.032 7 C -0.120 4.120 8 C -0.007 4.007 9 C 0.586 3.414 10 O -0.552 6.552 11 N -0.694 5.694 12 C 0.123 3.877 13 C 0.126 3.874 14 H 0.050 0.950 15 C -0.160 4.160 16 C 0.152 3.848 17 N -0.601 5.601 18 C -0.216 4.216 19 H 0.081 0.919 20 C -0.004 4.004 21 N -0.917 5.917 22 Si 0.906 3.094 23 H -0.288 1.288 24 H -0.290 1.290 25 H -0.280 1.280 26 H 0.084 0.916 27 H 0.086 0.914 28 H 0.112 0.888 29 H 0.166 0.834 30 H 0.407 0.593 31 H 0.075 0.925 32 H 0.062 0.938 33 H 0.058 0.942 34 H 0.080 0.920 35 H 0.072 0.928 36 H 0.026 0.974 37 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.150 14.347 9.803 18.790 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.071 5.071 3 C -0.058 4.058 4 Cl 0.026 6.974 5 C -0.129 4.129 6 Cl -0.004 7.004 7 C -0.146 4.146 8 C -0.122 4.122 9 C 0.372 3.628 10 O -0.432 6.432 11 N -0.344 5.344 12 C -0.001 4.001 13 C 0.018 3.982 14 H 0.067 0.933 15 C -0.199 4.199 16 C 0.026 3.974 17 N -0.327 5.327 18 C -0.343 4.343 19 H 0.098 0.902 20 C -0.201 4.201 21 N -0.564 5.564 22 Si 0.736 3.264 23 H -0.215 1.215 24 H -0.216 1.216 25 H -0.206 1.206 26 H 0.103 0.897 27 H 0.105 0.895 28 H 0.131 0.869 29 H 0.184 0.816 30 H 0.243 0.757 31 H 0.094 0.906 32 H 0.081 0.919 33 H 0.077 0.923 34 H 0.098 0.902 35 H 0.090 0.910 36 H 0.044 0.956 37 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -8.180 14.423 9.414 19.068 hybrid contribution 0.923 1.091 -0.861 1.668 sum -7.257 15.514 8.553 19.144 Atomic orbital electron populations 1.22422 0.74581 1.05661 1.04992 1.43724 1.07412 1.03288 1.52723 1.20532 0.88968 0.82342 1.13921 1.98394 1.89898 1.11844 1.97248 1.19540 0.86386 0.91640 1.15357 1.98343 1.39399 1.65173 1.97471 1.21286 0.95943 0.92387 1.05000 1.20188 0.89121 0.87865 1.15043 1.16703 0.85961 0.82852 0.77293 1.90779 1.16124 1.84665 1.51661 1.45645 1.09913 1.06531 1.72272 1.21920 0.98084 0.78609 1.01458 1.22439 0.91720 0.93161 0.90832 0.93254 1.23666 1.00975 0.95449 0.99858 1.22026 0.91859 0.88354 0.95169 1.45669 1.66084 1.07971 1.12978 1.18835 1.30923 0.92158 0.92422 0.90161 1.24757 1.00686 0.96311 0.98387 1.69822 1.43891 1.11629 1.31048 0.86209 0.78374 0.79387 0.82387 1.21486 1.21634 1.20576 0.89740 0.89519 0.86943 0.81640 0.75709 0.90639 0.91949 0.92306 0.90182 0.90969 0.95649 0.93650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 31. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.65 10.37 59.85 0.62 1.27 16 2 N -0.40 -5.06 3.17 -116.64 -0.37 -5.43 16 3 C 0.09 1.07 7.39 -16.76 -0.12 0.94 16 4 Cl 0.00 -0.02 28.40 -51.86 -1.47 -1.50 16 5 C -0.09 -1.23 6.66 -39.91 -0.27 -1.49 16 6 Cl -0.03 -0.39 29.12 -51.86 -1.51 -1.90 16 7 C -0.12 -1.60 10.34 -39.11 -0.40 -2.01 16 8 C -0.01 -0.11 6.89 -81.94 -0.56 -0.67 16 9 C 0.59 9.47 7.77 -12.92 -0.10 9.37 16 10 O -0.55 -9.98 14.77 5.17 0.08 -9.90 16 11 N -0.69 -11.11 5.31 -61.66 -0.33 -11.44 16 12 C 0.12 2.07 5.52 -4.04 -0.02 2.05 16 13 C 0.13 2.28 4.10 -72.40 -0.30 1.99 16 14 H 0.05 0.85 8.14 -51.93 -0.42 0.43 16 15 C -0.16 -2.76 8.03 -26.22 -0.21 -2.97 16 16 C 0.15 3.34 7.39 -8.50 -0.06 3.28 16 17 N -0.60 -14.04 3.65 -176.99 -0.65 -14.69 16 18 C -0.22 -5.62 10.55 -15.06 -0.16 -5.77 16 19 H 0.08 2.00 7.51 -52.49 -0.39 1.60 16 20 C 0.00 -0.12 5.50 -17.43 -0.10 -0.22 16 21 N -0.92 -26.42 11.51 55.49 0.64 -25.79 16 22 Si 0.91 21.76 29.55 -169.99 -5.02 16.74 16 23 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 24 H -0.29 -7.09 7.11 56.52 0.40 -6.68 16 25 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 26 H 0.08 0.76 8.14 -51.93 -0.42 0.33 16 27 H 0.09 0.69 7.59 -51.93 -0.39 0.30 16 28 H 0.11 1.31 6.52 -51.93 -0.34 0.97 16 29 H 0.17 1.98 7.44 -52.49 -0.39 1.59 16 30 H 0.41 6.24 7.27 -40.82 -0.30 5.94 16 31 H 0.08 1.46 8.14 -51.93 -0.42 1.03 16 32 H 0.06 0.94 8.14 -51.93 -0.42 0.51 16 33 H 0.06 0.84 8.14 -51.93 -0.42 0.42 16 34 H 0.08 1.37 8.12 -51.93 -0.42 0.95 16 35 H 0.07 1.80 7.13 -51.93 -0.37 1.43 16 36 H 0.03 0.57 8.14 -51.93 -0.42 0.14 16 37 H 0.25 7.14 8.31 -40.82 -0.34 6.81 16 LS Contribution 346.06 15.07 5.22 5.22 Total: -1.00 -30.49 346.06 -9.38 -39.87 By element: Atomic # 1 Polarization: 7.35 SS G_CDS: -4.28 Total: 3.07 kcal Atomic # 6 Polarization: 7.44 SS G_CDS: -1.69 Total: 5.75 kcal Atomic # 7 Polarization: -56.64 SS G_CDS: -0.71 Total: -57.35 kcal Atomic # 8 Polarization: -9.98 SS G_CDS: 0.08 Total: -9.90 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.02 Total: 16.74 kcal Atomic # 17 Polarization: -0.41 SS G_CDS: -2.98 Total: -3.39 kcal Total LS contribution 5.22 Total: 5.22 kcal Total: -30.49 -9.38 -39.87 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001038329921.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.623 kcal (2) G-P(sol) polarization free energy of solvation -30.488 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 70.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.384 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.872 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds