Wall clock time and date at job start Tue Mar 31 2020 16:33:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39963 * 120.47026 * 55.52086 * 3 2 1 5 5 C 1.38351 * 118.36856 * 179.72655 * 4 3 2 6 6 C 1.39374 * 119.23754 * 0.49276 * 5 4 3 7 7 C 1.48181 * 119.55295 * 179.77140 * 6 5 4 8 8 O 1.21528 * 119.99719 * 359.72805 * 7 6 5 9 9 N 1.34778 * 119.99998 * 179.72618 * 7 6 5 10 10 C 1.40048 * 119.99661 * 180.02562 * 9 7 6 11 11 C 1.40431 * 125.97710 * 359.97438 * 10 9 7 12 12 C 1.35227 * 107.86358 * 179.77684 * 11 10 9 13 13 N 1.34972 * 107.87044 * 0.42171 * 12 11 10 14 14 C 1.46500 * 125.97758 * 179.83774 * 13 12 11 15 15 C 1.50706 * 109.47299 * 124.71469 * 14 13 12 16 16 H 1.07998 * 119.99503 * 0.02562 * 15 14 13 17 17 C 1.37871 * 120.00434 * 180.02562 * 15 14 13 18 18 N 1.31516 * 119.99826 * 359.72891 * 17 15 14 19 19 Si 1.86800 * 120.00406 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.47364 * 179.72558 * 19 17 15 21 21 H 1.48508 * 109.46883 * 299.72681 * 19 17 15 22 22 H 1.48497 * 109.46870 * 59.72491 * 19 17 15 23 23 N 1.31242 * 125.97404 * 180.02562 * 10 9 7 24 24 N 1.32779 * 120.89644 * 359.49389 * 6 5 4 25 25 C 1.31484 * 121.77554 * 0.25610 * 24 6 5 26 26 Cl 1.73604 * 119.66543 * 179.97438 * 25 24 6 27 27 H 1.07997 * 120.81728 * 0.02562 * 4 3 2 28 28 H 1.07997 * 120.38006 * 180.26453 * 5 4 3 29 29 H 0.96995 * 120.00062 * 0.02562 * 9 7 6 30 30 H 1.07998 * 126.06594 * 0.03611 * 11 10 9 31 31 H 1.08003 * 126.07092 * 180.28647 * 12 11 10 32 32 H 1.09004 * 109.47078 * 4.72231 * 14 13 12 33 33 H 1.08993 * 109.47364 * 244.72002 * 14 13 12 34 34 H 0.97000 * 120.00236 * 0.27947 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2780 -0.6820 -0.9944 5 6 4.6606 -0.6478 -0.9559 6 6 5.2960 0.0506 0.0693 7 6 6.7765 0.0875 0.1202 8 8 7.4282 -0.4930 -0.7256 9 7 7.4003 0.7648 1.1044 10 6 8.7995 0.8000 1.1521 11 6 9.6719 0.1775 0.2447 12 6 10.9381 0.4519 0.6317 13 7 10.8753 1.2106 1.7463 14 6 12.0195 1.7295 2.4998 15 6 11.9016 3.2268 2.6244 16 1 11.0585 3.7403 2.1865 17 6 12.8700 3.9410 3.2974 18 7 13.8940 3.3150 3.8352 19 14 12.7236 5.7968 3.4524 20 1 13.8803 6.3222 4.2213 21 1 12.7107 6.4071 2.0986 22 1 11.4632 6.1363 4.1605 23 7 9.5248 1.4199 2.0533 24 7 4.5928 0.6880 0.9978 25 6 3.2779 0.6845 0.9945 26 17 2.4133 1.5360 2.2360 27 1 2.7595 -1.2180 -1.7754 28 1 5.2408 -1.1596 -1.7094 29 1 6.8801 1.2278 1.7796 30 1 9.3827 -0.4121 -0.6128 31 1 11.8399 0.1209 0.1381 32 1 12.9425 1.4802 1.9763 33 1 12.0332 1.2822 3.4936 34 1 13.9700 2.3513 3.7550 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001360628072.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:33:33 Heat of formation + Delta-G solvation = 115.445080 kcal Electronic energy + Delta-G solvation = -23367.675167 eV Core-core repulsion = 19522.186191 eV Total energy + Delta-G solvation = -3845.488976 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.058 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.51835 -40.68458 -39.24846 -37.35724 -37.21197 -35.15329 -33.92051 -33.45820 -32.23670 -30.90189 -29.49574 -27.04646 -25.88559 -24.50046 -23.27394 -22.19398 -20.77072 -20.02528 -19.93201 -18.27747 -17.90445 -17.23578 -16.64213 -16.03691 -16.00407 -15.37116 -15.13447 -14.92747 -14.45144 -14.24503 -14.07892 -13.81044 -13.75700 -13.61153 -13.28655 -12.99839 -12.55320 -12.43663 -12.26152 -11.96599 -11.91803 -11.21352 -10.87627 -10.84451 -10.79054 -10.59003 -10.27913 -10.17362 -9.88907 -9.78572 -9.04640 -8.60583 -8.31583 -7.64193 -6.60653 -4.35018 -0.62981 0.22094 0.96946 1.70743 1.94096 2.37207 2.44519 2.74109 2.91223 3.06524 3.34481 3.37082 3.39017 3.57380 3.58806 3.64994 3.93407 4.11203 4.28842 4.39131 4.44455 4.98007 5.01064 5.12984 5.34586 5.44578 5.62443 6.01775 6.25645 6.32999 6.50255 6.62751 6.69805 6.77486 7.17455 7.32067 7.62770 7.75219 7.89337 8.30487 8.44387 8.58082 9.33059 10.77054 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.017506 B = 0.002411 C = 0.002171 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1599.030508 B =11610.884151 C =12893.774258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.378 5.378 2 C 0.249 3.751 3 C -0.042 4.042 4 C -0.016 4.016 5 C -0.106 4.106 6 C 0.138 3.862 7 C 0.575 3.425 8 O -0.499 6.499 9 N -0.604 5.604 10 C 0.253 3.747 11 C -0.284 4.284 12 C 0.052 3.948 13 N -0.313 5.313 14 C 0.248 3.752 15 C -0.609 4.609 16 H 0.064 0.936 17 C 0.023 3.977 18 N -0.904 5.904 19 Si 1.076 2.924 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.285 1.285 23 N -0.293 5.293 24 N -0.448 5.448 25 C 0.218 3.782 26 Cl 0.001 6.999 27 H 0.167 0.833 28 H 0.173 0.827 29 H 0.423 0.577 30 H 0.163 0.837 31 H 0.170 0.830 32 H 0.047 0.953 33 H 0.036 0.964 34 H 0.267 0.733 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.653 -9.490 -10.019 24.839 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.053 5.053 2 C -0.068 4.068 3 C -0.049 4.049 4 C -0.043 4.043 5 C -0.126 4.126 6 C -0.002 4.002 7 C 0.358 3.642 8 O -0.372 6.372 9 N -0.251 5.251 10 C 0.000 4.000 11 C -0.315 4.315 12 C -0.097 4.097 13 N -0.095 5.095 14 C 0.130 3.870 15 C -0.647 4.647 16 H 0.082 0.918 17 C -0.181 4.181 18 N -0.539 5.539 19 Si 0.903 3.097 20 H -0.205 1.205 21 H -0.212 1.212 22 H -0.211 1.211 23 N -0.124 5.124 24 N -0.161 5.161 25 C 0.048 3.952 26 Cl 0.030 6.970 27 H 0.185 0.815 28 H 0.191 0.809 29 H 0.261 0.739 30 H 0.180 0.820 31 H 0.187 0.813 32 H 0.065 0.935 33 H 0.054 0.946 34 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -20.687 -7.274 -8.099 23.376 hybrid contribution -1.032 -1.876 -1.363 2.538 sum -21.719 -9.150 -9.462 25.396 Atomic orbital electron populations 1.81299 1.11307 1.06504 1.06170 1.24986 0.91878 0.94971 0.94973 1.16718 0.86208 1.03541 0.98439 1.21768 0.93489 0.93552 0.95537 1.22208 0.94225 0.97581 0.98623 1.21247 0.93946 0.93880 0.91099 1.17522 0.85100 0.79804 0.81779 1.90779 1.64449 1.43618 1.38315 1.42163 1.03513 1.50475 1.28926 1.19030 0.83311 1.00525 0.97121 1.21519 0.90136 1.13517 1.06298 1.22583 0.99452 0.96870 0.90836 1.48860 1.04287 1.36301 1.20069 1.19804 0.79378 0.96590 0.91204 1.22091 1.11901 0.90269 1.40428 0.91794 1.25923 0.92149 1.07489 0.92583 1.70857 1.29810 1.11186 1.42057 0.83424 0.76256 0.73334 0.76674 1.20521 1.21220 1.21080 1.77412 0.88200 1.24093 1.22667 1.67034 1.06278 1.17863 1.24928 1.21661 0.89132 0.93810 0.90583 1.98483 1.72594 1.74832 1.51085 0.81515 0.80907 0.73903 0.81998 0.81298 0.93492 0.94624 0.92277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.38 -3.64 18.54 41.84 0.78 -2.86 16 2 C 0.25 1.88 14.41 -22.47 -0.32 1.55 16 3 C -0.04 -0.27 5.75 -106.66 -0.61 -0.88 16 4 C -0.02 -0.06 9.89 -38.89 -0.38 -0.45 16 5 C -0.11 -0.61 9.61 -39.12 -0.38 -0.98 16 6 C 0.14 1.26 6.75 -82.95 -0.56 0.70 16 7 C 0.58 7.32 7.78 -12.18 -0.09 7.22 16 8 O -0.50 -7.15 13.43 5.34 0.07 -7.08 16 9 N -0.60 -9.02 5.43 -11.90 -0.06 -9.08 16 10 C 0.25 4.82 8.10 -154.47 -1.25 3.57 16 11 C -0.28 -5.18 9.60 -39.83 -0.38 -5.56 16 12 C 0.05 0.98 11.43 -17.24 -0.20 0.79 16 13 N -0.31 -7.04 3.67 -62.56 -0.23 -7.27 16 14 C 0.25 6.10 5.57 -5.19 -0.03 6.07 16 15 C -0.61 -16.79 9.24 -34.44 -0.32 -17.11 16 16 H 0.06 1.84 7.81 -52.49 -0.41 1.43 16 17 C 0.02 0.64 5.46 -17.82 -0.10 0.55 16 18 N -0.90 -25.93 13.65 55.43 0.76 -25.17 16 19 Si 1.08 24.62 29.90 -169.99 -5.08 19.54 16 20 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 21 H -0.29 -6.27 7.11 56.52 0.40 -5.87 16 22 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 23 N -0.29 -6.57 12.42 31.42 0.39 -6.18 16 24 N -0.45 -4.28 9.49 -6.61 -0.06 -4.34 16 25 C 0.22 1.81 7.31 -17.03 -0.12 1.68 16 26 Cl 0.00 0.01 28.18 -51.86 -1.46 -1.45 16 27 H 0.17 0.10 8.06 -52.49 -0.42 -0.32 16 28 H 0.17 0.74 7.62 -52.49 -0.40 0.34 16 29 H 0.42 5.74 8.14 -40.82 -0.33 5.41 16 30 H 0.16 2.74 5.91 -52.49 -0.31 2.43 16 31 H 0.17 2.53 8.06 -52.48 -0.42 2.11 16 32 H 0.05 1.11 7.94 -51.93 -0.41 0.70 16 33 H 0.04 0.91 8.00 -51.93 -0.42 0.50 16 34 H 0.27 7.47 7.22 -40.82 -0.29 7.17 16 LS Contribution 335.72 15.07 5.06 5.06 Total: -1.00 -32.84 335.72 -6.82 -39.66 By element: Atomic # 1 Polarization: 4.24 SS G_CDS: -2.22 Total: 2.03 kcal Atomic # 6 Polarization: 1.91 SS G_CDS: -4.75 Total: -2.84 kcal Atomic # 7 Polarization: -56.48 SS G_CDS: 1.57 Total: -54.91 kcal Atomic # 8 Polarization: -7.15 SS G_CDS: 0.07 Total: -7.08 kcal Atomic # 14 Polarization: 24.62 SS G_CDS: -5.08 Total: 19.54 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.46 Total: -1.45 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -32.84 -6.82 -39.66 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001360628072.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 155.107 kcal (2) G-P(sol) polarization free energy of solvation -32.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 122.262 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.817 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 115.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds