Wall clock time and date at job start Tue Mar 31 2020 16:45:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13591 * 1 3 3 C 1.43200 * 179.97438 * 2 1 4 4 C 1.39935 * 120.45783 * 261.79914 * 3 2 1 5 5 N 1.31307 * 120.74096 * 179.76954 * 4 3 2 6 6 C 1.32823 * 121.81791 * 0.52061 * 5 4 3 7 7 C 1.48089 * 119.58228 * 179.75158 * 6 5 4 8 8 O 1.21542 * 120.00108 * 179.72508 * 7 6 5 9 9 N 1.34775 * 119.99931 * 359.72972 * 7 6 5 10 10 C 1.40049 * 120.00516 * 179.97438 * 9 7 6 11 11 C 1.40434 * 125.96978 * 359.97081 * 10 9 7 12 12 C 1.35231 * 107.86442 * 179.75437 * 11 10 9 13 13 N 1.34973 * 107.86673 * 0.39828 * 12 11 10 14 14 C 1.46500 * 125.97578 * 179.86734 * 13 12 11 15 15 C 1.50706 * 109.47299 * 124.70762 * 14 13 12 16 16 H 1.07998 * 119.99503 * 0.02562 * 15 14 13 17 17 C 1.37871 * 120.00434 * 180.02562 * 15 14 13 18 18 N 1.31516 * 119.99826 * 359.72891 * 17 15 14 19 19 Si 1.86800 * 120.00406 * 180.02562 * 17 15 14 20 20 H 1.48501 * 109.47364 * 179.72558 * 19 17 15 21 21 H 1.48508 * 109.46883 * 299.72681 * 19 17 15 22 22 H 1.48497 * 109.46870 * 59.72491 * 19 17 15 23 23 N 1.31237 * 125.98256 * 179.97438 * 10 9 7 24 24 C 1.39493 * 120.84055 * 359.47737 * 6 5 4 25 25 Cl 1.73598 * 120.41639 * 180.27821 * 24 6 5 26 26 C 1.38553 * 119.17227 * 0.25195 * 24 6 5 27 27 H 1.07993 * 119.62679 * 0.02562 * 4 3 2 28 28 H 0.97008 * 119.99925 * 359.97438 * 9 7 6 29 29 H 1.07996 * 126.06872 * 0.02562 * 11 10 9 30 30 H 1.08001 * 126.06779 * 180.23698 * 12 11 10 31 31 H 1.09004 * 109.47078 * 4.71524 * 14 13 12 32 32 H 1.08993 * 109.47364 * 244.71295 * 14 13 12 33 33 H 0.97000 * 120.00236 * 0.27947 * 18 17 15 34 34 H 1.07998 * 120.83169 * 179.97438 * 26 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.5679 0.0006 0.0000 4 6 3.2772 0.1730 1.1939 5 7 4.5902 0.1700 1.2010 6 6 5.2961 0.0153 0.0866 7 6 6.7756 0.0253 0.1510 8 8 7.4291 -0.1206 -0.8633 9 7 7.3974 0.1962 1.3345 10 6 8.7965 0.2051 1.3957 11 6 9.6707 0.0477 0.3079 12 6 10.9363 0.1215 0.7788 13 7 10.8711 0.3092 2.1138 14 6 12.0138 0.4411 3.0211 15 6 11.8952 1.7291 3.7945 16 1 11.0527 2.3837 3.6272 17 6 12.8621 2.0717 4.7156 18 7 13.8854 1.2720 4.9232 19 14 12.7148 3.6679 5.6747 20 1 13.8699 3.7987 6.5987 21 1 12.7041 4.8138 4.7301 22 1 11.4530 3.6601 6.4577 23 7 9.5200 0.3620 2.4793 24 6 4.6617 -0.1622 -1.1430 25 17 5.5952 -0.3706 -2.5917 26 6 3.2771 -0.1706 -1.1935 27 1 2.7385 0.3059 2.1204 28 1 6.8758 0.3129 2.1440 29 1 9.3834 -0.1012 -0.7224 30 1 11.8390 0.0416 0.1913 31 1 12.9378 0.4483 2.4430 32 1 12.0258 -0.3995 3.7148 33 1 13.9618 0.4430 4.4253 34 1 2.7583 -0.3055 -2.1311 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001435242340.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:45:30 Heat of formation + Delta-G solvation = 124.314898 kcal Electronic energy + Delta-G solvation = -23530.440760 eV Core-core repulsion = 19685.336408 eV Total energy + Delta-G solvation = -3845.104352 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 331.058 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.46720 -40.63786 -39.15420 -37.30903 -37.04558 -35.02347 -33.85142 -33.38071 -32.18416 -30.85578 -29.45014 -26.99074 -25.86798 -24.53823 -23.26152 -22.16474 -20.72915 -19.98079 -19.85501 -18.22510 -17.77767 -17.21470 -16.53359 -15.95315 -15.91508 -15.50038 -15.13576 -14.86165 -14.25662 -14.20036 -14.06601 -13.80200 -13.69792 -13.66339 -13.26383 -13.12674 -12.53144 -12.49452 -12.30020 -11.99710 -11.62100 -11.19244 -10.83867 -10.77020 -10.59401 -10.49932 -10.16891 -10.06788 -9.68908 -9.64385 -9.02500 -8.59530 -8.26757 -7.59224 -6.59501 -4.33739 -0.59877 0.20611 1.40113 1.76654 1.97746 2.40285 2.46333 2.78217 2.95897 3.10562 3.33771 3.37497 3.39207 3.57776 3.64042 3.65598 3.81446 4.01798 4.28582 4.38615 4.40386 4.84695 4.99201 5.14159 5.35691 5.43919 5.66801 6.07323 6.32471 6.39960 6.53316 6.67442 6.71977 6.84741 7.23146 7.38063 7.65555 7.78400 7.97827 8.32064 8.48348 8.59559 9.34360 10.78136 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.018639 B = 0.002463 C = 0.002234 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1501.894518 B =11364.999620 C =12529.675657 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.388 5.388 2 C 0.253 3.747 3 C -0.045 4.045 4 C 0.158 3.842 5 N -0.438 5.438 6 C 0.127 3.873 7 C 0.567 3.433 8 O -0.483 6.483 9 N -0.605 5.605 10 C 0.256 3.744 11 C -0.283 4.283 12 C 0.051 3.949 13 N -0.315 5.315 14 C 0.249 3.751 15 C -0.608 4.608 16 H 0.064 0.936 17 C 0.023 3.977 18 N -0.904 5.904 19 Si 1.076 2.924 20 H -0.280 1.280 21 H -0.286 1.286 22 H -0.285 1.285 23 N -0.295 5.295 24 C -0.042 4.042 25 Cl 0.006 6.994 26 C -0.025 4.025 27 H 0.184 0.816 28 H 0.422 0.578 29 H 0.163 0.837 30 H 0.169 0.831 31 H 0.047 0.953 32 H 0.036 0.964 33 H 0.267 0.733 34 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -20.576 -4.047 -13.062 24.706 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.062 5.062 2 C -0.064 4.064 3 C -0.051 4.051 4 C -0.006 4.006 5 N -0.148 5.148 6 C -0.013 4.013 7 C 0.350 3.650 8 O -0.354 6.354 9 N -0.253 5.253 10 C 0.003 3.997 11 C -0.314 4.314 12 C -0.098 4.098 13 N -0.096 5.096 14 C 0.131 3.869 15 C -0.646 4.646 16 H 0.082 0.918 17 C -0.182 4.182 18 N -0.540 5.540 19 Si 0.903 3.097 20 H -0.205 1.205 21 H -0.212 1.212 22 H -0.211 1.211 23 N -0.126 5.126 24 C -0.072 4.072 25 Cl 0.035 6.965 26 C -0.053 4.053 27 H 0.201 0.799 28 H 0.259 0.741 29 H 0.180 0.820 30 H 0.186 0.814 31 H 0.065 0.935 32 H 0.053 0.947 33 H 0.077 0.923 34 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -20.431 -2.959 -10.656 23.232 hybrid contribution -0.999 -1.132 -2.454 2.882 sum -21.430 -4.091 -13.110 25.453 Atomic orbital electron populations 1.81337 1.11536 1.07251 1.06119 1.25087 0.91889 0.94586 0.94791 1.17044 0.86113 1.06506 0.95487 1.23137 0.88909 0.91329 0.97180 1.67867 1.08132 1.11018 1.27831 1.21208 0.94971 0.96920 0.88189 1.17489 0.85153 0.78763 0.83623 1.90858 1.64400 1.46556 1.33564 1.42130 1.03390 1.69066 1.10700 1.19014 0.83336 1.03677 0.93664 1.21539 0.90093 1.19281 1.00484 1.22576 0.99464 1.02063 0.85720 1.48836 1.04270 1.50671 1.05856 1.19788 0.79468 0.99336 0.88357 1.22093 1.11964 1.05237 1.25332 0.91802 1.25923 0.92168 1.04074 0.96014 1.70855 1.29832 1.12047 1.41222 0.83422 0.76232 0.73904 0.76108 1.20538 1.21232 1.21095 1.77394 0.88185 1.27001 1.20024 1.21769 0.92500 1.02180 0.90775 1.98478 1.71592 1.94409 1.31991 1.21628 0.91448 0.93400 0.98865 0.79925 0.74101 0.81955 0.81393 0.93543 0.94670 0.92277 0.81780 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.39 -3.39 18.54 41.83 0.78 -2.61 16 2 C 0.25 1.56 15.36 -22.48 -0.35 1.22 16 3 C -0.05 -0.23 5.75 -106.72 -0.61 -0.84 16 4 C 0.16 0.84 10.91 -17.14 -0.19 0.65 16 5 N -0.44 -3.64 9.51 -9.46 -0.09 -3.73 16 6 C 0.13 1.25 6.75 -82.93 -0.56 0.69 16 7 C 0.57 7.59 7.77 -12.22 -0.09 7.49 16 8 O -0.48 -7.26 11.04 5.33 0.06 -7.20 16 9 N -0.61 -9.10 5.43 -11.92 -0.06 -9.17 16 10 C 0.26 4.91 8.10 -154.47 -1.25 3.66 16 11 C -0.28 -5.25 9.60 -39.83 -0.38 -5.63 16 12 C 0.05 0.98 11.43 -17.24 -0.20 0.78 16 13 N -0.31 -7.12 3.67 -62.56 -0.23 -7.35 16 14 C 0.25 6.14 5.57 -5.19 -0.03 6.12 16 15 C -0.61 -16.81 9.24 -34.44 -0.32 -17.12 16 16 H 0.06 1.84 7.81 -52.49 -0.41 1.43 16 17 C 0.02 0.63 5.46 -17.82 -0.10 0.54 16 18 N -0.90 -25.99 13.65 55.43 0.76 -25.24 16 19 Si 1.08 24.61 29.90 -169.99 -5.08 19.52 16 20 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 21 H -0.29 -6.28 7.11 56.52 0.40 -5.88 16 22 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 23 N -0.30 -6.63 12.42 31.42 0.39 -6.24 16 24 C -0.04 -0.34 6.36 -39.00 -0.25 -0.58 16 25 Cl 0.01 0.05 26.00 -51.86 -1.35 -1.29 16 26 C -0.02 -0.13 9.70 -38.85 -0.38 -0.50 16 27 H 0.18 0.44 8.06 -52.49 -0.42 0.02 16 28 H 0.42 5.59 8.14 -40.82 -0.33 5.26 16 29 H 0.16 2.83 5.91 -52.49 -0.31 2.52 16 30 H 0.17 2.58 8.06 -52.49 -0.42 2.16 16 31 H 0.05 1.11 7.94 -51.93 -0.41 0.69 16 32 H 0.04 0.91 8.00 -51.93 -0.42 0.49 16 33 H 0.27 7.49 7.22 -40.82 -0.29 7.20 16 34 H 0.16 0.44 8.06 -52.49 -0.42 0.02 16 LS Contribution 332.70 15.07 5.01 5.01 Total: -1.00 -33.02 332.70 -6.76 -39.78 By element: Atomic # 1 Polarization: 4.30 SS G_CDS: -2.24 Total: 2.06 kcal Atomic # 6 Polarization: 1.16 SS G_CDS: -4.70 Total: -3.54 kcal Atomic # 7 Polarization: -55.88 SS G_CDS: 1.54 Total: -54.34 kcal Atomic # 8 Polarization: -7.26 SS G_CDS: 0.06 Total: -7.20 kcal Atomic # 14 Polarization: 24.61 SS G_CDS: -5.08 Total: 19.52 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -1.35 Total: -1.29 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -33.02 -6.76 -39.78 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001435242340.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 164.091 kcal (2) G-P(sol) polarization free energy of solvation -33.015 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.076 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.777 kcal (6) G-S(sol) free energy of system = (1) + (5) 124.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds