Wall clock time and date at job start Tue Mar 31 2020 17:22:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.35655 * 125.70104 * 2 1 4 4 Cl 1.73606 * 125.58089 * 0.22919 * 3 2 1 5 5 C 1.35717 * 108.83877 * 179.97438 * 3 2 1 6 6 Cl 1.73599 * 126.06449 * 179.97438 * 5 3 2 7 7 C 1.39793 * 107.86953 * 0.02562 * 5 3 2 8 8 C 1.37811 * 125.69020 * 179.97438 * 2 1 3 9 9 C 1.46539 * 126.22546 * 359.97438 * 8 2 1 10 10 O 1.21708 * 120.00329 * 190.02756 * 9 8 2 11 11 N 1.34775 * 119.99762 * 10.03164 * 9 8 2 12 12 C 1.46502 * 120.00019 * 179.32791 * 11 9 8 13 13 C 1.53002 * 109.47170 * 184.98039 * 12 11 9 14 14 N 1.46503 * 115.55318 * 281.10427 * 13 12 11 15 15 C 1.36939 * 119.99927 * 306.13030 * 14 13 12 16 16 H 1.08003 * 119.99850 * 3.26126 * 15 14 13 17 17 C 1.38814 * 119.99615 * 183.26547 * 15 14 13 18 18 N 1.31620 * 120.00236 * 5.57878 * 17 15 14 19 19 Si 1.86798 * 119.99778 * 185.58314 * 17 15 14 20 20 H 1.48508 * 109.47289 * 5.01151 * 19 17 15 21 21 H 1.48498 * 109.47171 * 125.00827 * 19 17 15 22 22 H 1.48493 * 109.47460 * 245.01184 * 19 17 15 23 23 C 1.53000 * 117.49485 * 135.43668 * 13 12 11 24 24 C 1.52994 * 117.49567 * 66.77876 * 13 12 11 25 25 H 1.08999 * 109.46940 * 106.02738 * 1 2 3 26 26 H 1.09000 * 109.47382 * 226.03375 * 1 2 3 27 27 H 1.08996 * 109.46877 * 346.03356 * 1 2 3 28 28 H 1.08006 * 126.43159 * 180.02562 * 7 5 3 29 29 H 0.96999 * 120.00057 * 359.32258 * 11 9 8 30 30 H 1.08992 * 109.47344 * 304.98420 * 12 11 9 31 31 H 1.09006 * 109.47275 * 64.98079 * 12 11 9 32 32 H 0.96995 * 119.99961 * 126.12528 * 14 13 12 33 33 H 0.96993 * 119.99657 * 179.97438 * 18 17 15 34 34 H 1.09004 * 117.50084 * 0.02562 * 23 13 12 35 35 H 1.09001 * 117.49884 * 145.02354 * 23 13 12 36 36 H 1.09003 * 117.49604 * 214.97596 * 24 13 12 37 37 H 1.09000 * 117.50090 * 359.97438 * 24 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2566 1.1016 0.0000 4 17 1.6995 2.7459 0.0056 5 6 3.5554 0.7079 0.0006 6 17 4.9405 1.7545 0.0002 7 6 3.5800 -0.6898 0.0004 8 6 2.2690 -1.1193 0.0005 9 6 1.8141 -2.5123 0.0017 10 8 2.6118 -3.4129 0.1855 11 7 0.5122 -2.7962 -0.2010 12 6 0.0599 -4.1895 -0.2145 13 6 -1.4239 -4.2405 -0.5845 14 7 -2.3566 -3.9173 0.4981 15 6 -2.2842 -4.5910 1.6881 16 1 -1.5066 -5.3233 1.8476 17 6 -3.2104 -4.3326 2.6893 18 7 -4.2218 -3.5229 2.4572 19 14 -3.0213 -5.1340 4.3659 20 1 -1.7478 -5.8968 4.4093 21 1 -3.0060 -4.0852 5.4170 22 1 -4.1595 -6.0573 4.6045 23 6 -1.8620 -5.2944 -1.6034 24 6 -1.8132 -3.8174 -2.0023 25 1 -0.3633 -0.2837 -0.9877 26 1 -0.3634 -0.7134 0.7396 27 1 -0.3633 0.9973 0.2480 28 1 4.4601 -1.3158 0.0011 29 1 -0.1252 -2.0780 -0.3378 30 1 0.6369 -4.7518 -0.9486 31 1 0.2033 -4.6277 0.7732 32 1 -3.0253 -3.2261 0.3719 33 1 -4.8691 -3.3427 3.1567 34 1 -1.0933 -5.9518 -2.0097 35 1 -2.8444 -5.7471 -1.4685 36 1 -2.7636 -3.2989 -2.1297 37 1 -1.0124 -3.5024 -2.6714 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001483737848.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:22:19 Heat of formation + Delta-G solvation = 46.002493 kcal Electronic energy + Delta-G solvation = -23634.269976 eV Core-core repulsion = 19886.877237 eV Total energy + Delta-G solvation = -3747.392739 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 331.060 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.80856 -39.20308 -37.57532 -37.03740 -36.67672 -34.37864 -33.20958 -32.81356 -29.88714 -29.63756 -26.99567 -26.59725 -24.02627 -22.64275 -21.85632 -21.14253 -20.20401 -19.14977 -18.03432 -17.28458 -16.45465 -16.28878 -15.84426 -15.34789 -14.85450 -14.56477 -14.40872 -14.12016 -13.86367 -13.73015 -13.44911 -13.24852 -13.12878 -12.49865 -12.35917 -12.10806 -12.00934 -11.64757 -11.57447 -11.16425 -11.07569 -11.06897 -10.95345 -10.51666 -10.31214 -10.08460 -9.82432 -9.58854 -9.06856 -8.95097 -8.83577 -8.39323 -7.18118 -5.96041 -3.26482 1.06936 1.22816 1.84082 2.04777 2.67045 3.23314 3.28816 3.33748 3.41689 3.42959 4.29988 4.37523 4.46473 4.54312 4.80693 4.86281 5.06679 5.17994 5.20620 5.34934 5.36785 5.45355 5.48937 5.68476 5.96828 6.00713 6.09615 6.30786 6.33554 6.40688 6.44684 6.48861 6.59355 6.68975 7.58821 7.59518 8.21236 8.23036 9.33325 9.84259 10.19709 11.25364 Molecular weight = 331.06amu Principal moments of inertia in cm(-1) A = 0.013796 B = 0.003285 C = 0.003119 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2029.095410 B = 8520.338605 C = 8974.032627 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 N -0.411 5.411 3 C 0.092 3.908 4 Cl 0.000 7.000 5 C -0.100 4.100 6 Cl -0.034 7.034 7 C -0.094 4.094 8 C -0.012 4.012 9 C 0.585 3.415 10 O -0.528 6.528 11 N -0.711 5.711 12 C 0.148 3.852 13 C 0.130 3.870 14 N -0.688 5.688 15 C -0.243 4.243 16 H 0.075 0.925 17 C -0.007 4.007 18 N -0.929 5.929 19 Si 0.906 3.094 20 H -0.278 1.278 21 H -0.290 1.290 22 H -0.290 1.290 23 C -0.193 4.193 24 C -0.191 4.191 25 H 0.094 0.906 26 H 0.108 0.892 27 H 0.103 0.897 28 H 0.167 0.833 29 H 0.398 0.602 30 H 0.067 0.933 31 H 0.082 0.918 32 H 0.387 0.613 33 H 0.256 0.744 34 H 0.083 0.917 35 H 0.095 0.905 36 H 0.091 0.909 37 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.228 11.071 -8.834 18.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 N -0.089 5.089 3 C -0.051 4.051 4 Cl 0.028 6.972 5 C -0.135 4.135 6 Cl -0.005 7.005 7 C -0.121 4.121 8 C -0.125 4.125 9 C 0.371 3.629 10 O -0.404 6.404 11 N -0.364 5.364 12 C 0.023 3.977 13 C 0.035 3.965 14 N -0.327 5.327 15 C -0.373 4.373 16 H 0.093 0.907 17 C -0.203 4.203 18 N -0.577 5.577 19 Si 0.737 3.263 20 H -0.203 1.203 21 H -0.217 1.217 22 H -0.217 1.217 23 C -0.234 4.234 24 C -0.229 4.229 25 H 0.112 0.888 26 H 0.126 0.874 27 H 0.122 0.878 28 H 0.184 0.816 29 H 0.236 0.764 30 H 0.085 0.915 31 H 0.100 0.900 32 H 0.222 0.778 33 H 0.066 0.934 34 H 0.102 0.898 35 H 0.114 0.886 36 H 0.110 0.890 37 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 11.435 10.499 -8.508 17.702 hybrid contribution -0.733 0.502 0.847 1.227 sum 10.702 11.001 -7.661 17.153 Atomic orbital electron populations 1.22607 0.74935 1.06829 1.05238 1.44005 1.07148 1.04007 1.53750 1.20578 0.88993 0.82438 1.13125 1.98406 1.89826 1.11759 1.97191 1.19535 0.86351 0.91593 1.16018 1.98336 1.39465 1.65169 1.97521 1.21082 0.95839 0.91620 1.03518 1.20621 0.89932 0.86397 1.15571 1.16790 0.82823 0.85644 0.77690 1.90857 1.53998 1.45641 1.49950 1.46250 1.07823 1.10545 1.71828 1.21251 0.92922 0.80717 1.02791 1.20161 0.89462 1.01902 0.84931 1.41842 1.36648 1.43720 1.10467 1.19210 1.10488 1.17230 0.90398 0.90729 1.24741 0.96855 0.99994 0.98724 1.69677 1.14536 1.40219 1.33237 0.86138 0.77583 0.78516 0.84101 1.20289 1.21724 1.21714 1.23474 1.03119 0.91298 1.05541 1.23107 1.02574 0.99272 0.97919 0.88796 0.87411 0.87842 0.81564 0.76390 0.91504 0.89988 0.77766 0.93372 0.89831 0.88617 0.89009 0.89446 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.43 9.26 59.85 0.55 0.99 16 2 N -0.41 -4.88 3.17 -116.65 -0.37 -5.25 16 3 C 0.09 1.08 7.39 -16.76 -0.12 0.96 16 4 Cl 0.00 0.00 28.23 -51.86 -1.46 -1.47 16 5 C -0.10 -1.22 6.66 -39.90 -0.27 -1.48 16 6 Cl -0.03 -0.36 29.12 -51.86 -1.51 -1.87 16 7 C -0.09 -1.22 10.66 -39.10 -0.42 -1.64 16 8 C -0.01 -0.17 6.88 -81.94 -0.56 -0.73 16 9 C 0.58 9.35 7.75 -12.92 -0.10 9.25 16 10 O -0.53 -9.99 16.90 5.18 0.09 -9.90 16 11 N -0.71 -10.78 5.32 -61.66 -0.33 -11.11 16 12 C 0.15 2.51 5.62 -4.04 -0.02 2.49 16 13 C 0.13 2.28 2.26 -131.82 -0.30 1.98 16 14 N -0.69 -15.19 5.54 -47.23 -0.26 -15.45 16 15 C -0.24 -6.17 9.44 -15.06 -0.14 -6.31 16 16 H 0.07 1.90 7.11 -52.48 -0.37 1.52 16 17 C -0.01 -0.18 5.50 -17.43 -0.10 -0.27 16 18 N -0.93 -25.98 13.08 55.49 0.73 -25.26 16 19 Si 0.91 21.45 29.56 -169.99 -5.02 16.42 16 20 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 21 H -0.29 -6.96 7.11 56.52 0.40 -6.55 16 22 H -0.29 -6.94 7.11 56.52 0.40 -6.54 16 23 C -0.19 -3.11 10.11 -26.69 -0.27 -3.38 16 24 C -0.19 -2.76 10.15 -26.70 -0.27 -3.03 16 25 H 0.09 0.75 7.60 -51.93 -0.39 0.36 16 26 H 0.11 1.21 6.95 -51.93 -0.36 0.85 16 27 H 0.10 0.84 7.32 -51.93 -0.38 0.46 16 28 H 0.17 1.99 8.06 -52.48 -0.42 1.56 16 29 H 0.40 5.35 4.38 -40.82 -0.18 5.17 16 30 H 0.07 1.07 7.96 -51.93 -0.41 0.65 16 31 H 0.08 1.62 7.00 -51.93 -0.36 1.25 16 32 H 0.39 9.05 8.04 -40.82 -0.33 8.72 16 33 H 0.26 7.01 8.31 -40.82 -0.34 6.67 16 34 H 0.08 1.20 8.09 -51.93 -0.42 0.77 16 35 H 0.10 1.68 8.14 -51.93 -0.42 1.26 16 36 H 0.09 1.33 8.14 -51.93 -0.42 0.90 16 37 H 0.09 1.10 8.14 -51.93 -0.42 0.68 16 LS Contribution 349.17 15.07 5.26 5.26 Total: -1.00 -29.20 349.17 -8.94 -38.13 By element: Atomic # 1 Polarization: 15.71 SS G_CDS: -4.04 Total: 11.67 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -2.02 Total: -1.18 kcal Atomic # 7 Polarization: -56.83 SS G_CDS: -0.23 Total: -57.07 kcal Atomic # 8 Polarization: -9.99 SS G_CDS: 0.09 Total: -9.90 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.42 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -2.97 Total: -3.34 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -29.20 -8.94 -38.13 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001483737848.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.137 kcal (2) G-P(sol) polarization free energy of solvation -29.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 54.940 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.135 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.002 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds