Wall clock time and date at job start Tue Mar 31 2020 16:12:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30787 * 125.72410 * 2 1 4 4 C 1.34423 * 109.32324 * 179.97438 * 3 2 1 5 5 C 1.33861 * 107.79770 * 359.97438 * 4 3 2 6 6 N 1.34400 * 125.72240 * 179.69185 * 2 1 3 7 7 C 1.46473 * 128.44686 * 0.17773 * 6 2 1 8 8 C 1.53276 * 108.69540 * 162.67450 * 7 6 2 9 9 H 1.09002 * 109.43556 * 290.74080 * 8 7 6 10 10 C 1.50700 * 109.43515 * 170.83651 * 8 7 6 11 11 O 1.21283 * 119.99594 * 0.02562 * 10 8 7 12 12 N 1.34779 * 120.00273 * 179.97438 * 10 8 7 13 13 C 1.46499 * 119.99838 * 180.02562 * 12 10 8 14 14 H 1.09003 * 109.47111 * 325.00520 * 13 12 10 15 15 C 1.50697 * 109.47015 * 205.00411 * 13 12 10 16 16 H 1.08004 * 120.00210 * 359.97438 * 15 13 12 17 17 C 1.37883 * 120.00132 * 180.02562 * 15 13 12 18 18 N 1.31514 * 119.99964 * 359.97438 * 17 15 13 19 19 Si 1.86797 * 119.99801 * 179.97438 * 17 15 13 20 20 H 1.48500 * 109.47098 * 90.00261 * 19 17 15 21 21 H 1.48501 * 109.46828 * 209.99704 * 19 17 15 22 22 H 1.48503 * 109.47365 * 329.99811 * 19 17 15 23 23 C 1.52997 * 109.47328 * 85.00293 * 13 12 10 24 24 F 1.39904 * 109.46785 * 59.99816 * 23 13 12 25 25 F 1.39897 * 109.47237 * 179.97438 * 23 13 12 26 26 F 1.39903 * 109.46883 * 300.00019 * 23 13 12 27 27 C 1.53123 * 109.70698 * 50.76769 * 8 7 6 28 28 C 1.50711 * 128.68401 * 180.14119 * 5 4 3 29 29 H 1.09002 * 109.47152 * 90.02589 * 1 2 3 30 30 H 1.09001 * 109.46980 * 330.02689 * 1 2 3 31 31 H 1.09004 * 109.47113 * 210.02670 * 1 2 3 32 32 H 1.07998 * 126.10562 * 180.02562 * 4 3 2 33 33 H 1.09003 * 109.59947 * 282.44132 * 7 6 2 34 34 H 1.09001 * 109.59822 * 42.75095 * 7 6 2 35 35 H 0.96996 * 119.99600 * 0.02562 * 12 10 8 36 36 H 0.96997 * 120.00263 * 179.97438 * 18 17 15 37 37 H 1.08998 * 109.49309 * 50.03035 * 27 8 7 38 38 H 1.09000 * 109.49966 * 170.10114 * 27 8 7 39 39 H 1.09001 * 109.74056 * 283.85852 * 28 5 4 40 40 H 1.08998 * 109.74628 * 44.57357 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2707 1.0618 0.0000 4 6 3.5602 0.6822 0.0006 5 6 3.5928 -0.6560 0.0015 6 7 2.2917 -1.0911 0.0059 7 6 1.8922 -2.5003 0.0099 8 6 3.0927 -3.3526 -0.4164 9 1 3.3050 -3.1782 -1.4713 10 6 2.7738 -4.8100 -0.2035 11 8 1.6945 -5.1355 0.2439 12 7 3.6876 -5.7518 -0.5112 13 6 3.3773 -7.1685 -0.3047 14 1 2.7556 -7.2786 0.5839 15 6 4.6578 -7.9415 -0.1208 16 1 5.6078 -7.4288 -0.1549 17 6 4.6167 -9.3036 0.0898 18 7 3.4600 -9.9280 0.1307 19 14 6.2040 -10.2618 0.3170 20 1 6.5570 -10.3001 1.7589 21 1 6.0218 -11.6475 -0.1849 22 1 7.2950 -9.5997 -0.4424 23 6 2.6258 -7.7089 -1.5229 24 9 3.4237 -7.5676 -2.6634 25 9 2.3300 -9.0620 -1.3260 26 9 1.4371 -6.9912 -1.6936 27 6 4.3185 -2.9722 0.4186 28 6 4.7919 -1.5690 0.0053 29 1 -0.3633 -0.0005 -1.0277 30 1 -0.3633 0.8902 0.5134 31 1 -0.3633 -0.8898 0.5143 32 1 4.4171 1.3396 0.0011 33 1 1.5771 -2.7881 1.0129 34 1 1.0687 -2.6488 -0.6887 35 1 4.5506 -5.4914 -0.8694 36 1 3.4310 -10.8862 0.2785 37 1 4.0540 -2.9767 1.4760 38 1 5.1177 -3.6916 0.2403 39 1 5.2364 -1.5972 -0.9896 40 1 5.5257 -1.2102 0.7271 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928803870.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:12:46 Heat of formation + Delta-G solvation = -124.247011 kcal Electronic energy + Delta-G solvation = -29540.221027 eV Core-core repulsion = 24941.145755 eV Total energy + Delta-G solvation = -4599.075272 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 331.125 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.46870 -46.12676 -45.72688 -42.44612 -39.57211 -36.31605 -34.89157 -33.44060 -32.71740 -31.33374 -30.05863 -28.42079 -26.47376 -24.83794 -24.47301 -22.65377 -21.62937 -20.84306 -19.90567 -19.01265 -17.74026 -16.99998 -16.91113 -16.74912 -16.41991 -16.06322 -15.59979 -15.13340 -14.79469 -14.66987 -14.34016 -14.05659 -13.74010 -13.47100 -13.20809 -13.10015 -13.05623 -12.92196 -12.62183 -12.52329 -12.47670 -12.39276 -12.11296 -11.99879 -11.93155 -11.85033 -11.35061 -11.24148 -11.10220 -10.93191 -10.90721 -10.50911 -9.97385 -9.80048 -9.56836 -9.40283 -8.83321 -8.45752 -8.23018 -6.34386 -4.59237 1.99114 2.63808 2.90738 3.07766 3.11370 3.18388 3.20749 3.56643 4.11239 4.21239 4.39201 4.42991 4.52410 4.58214 4.67270 4.82679 4.96817 5.07543 5.14898 5.22580 5.32077 5.37562 5.39216 5.55335 5.60903 5.68536 5.71478 5.72438 5.74645 5.88513 5.94035 6.08662 6.36326 6.71973 6.77545 6.95808 7.16342 7.32364 7.51765 8.05628 8.09055 8.36532 8.62998 9.09201 10.57208 Molecular weight = 331.12amu Principal moments of inertia in cm(-1) A = 0.020854 B = 0.003365 C = 0.003063 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1342.363651 B = 8318.972985 C = 9138.279730 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 C 0.207 3.793 3 N -0.497 5.497 4 C -0.026 4.026 5 C -0.027 4.027 6 N -0.449 5.449 7 C 0.123 3.877 8 C -0.120 4.120 9 H 0.105 0.895 10 C 0.516 3.484 11 O -0.534 6.534 12 N -0.705 5.705 13 C 0.245 3.755 14 H 0.086 0.914 15 C -0.554 4.554 16 H 0.078 0.922 17 C 0.066 3.934 18 N -0.838 5.838 19 Si 0.916 3.084 20 H -0.276 1.276 21 H -0.282 1.282 22 H -0.270 1.270 23 C 0.416 3.584 24 F -0.209 7.209 25 F -0.136 7.136 26 F -0.218 7.218 27 C -0.117 4.117 28 C -0.043 4.043 29 H 0.079 0.921 30 H 0.088 0.912 31 H 0.074 0.926 32 H 0.168 0.832 33 H 0.098 0.902 34 H 0.098 0.902 35 H 0.400 0.600 36 H 0.269 0.731 37 H 0.076 0.924 38 H 0.087 0.913 39 H 0.085 0.915 40 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.008 13.203 -0.729 13.262 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.127 4.127 2 C -0.055 4.055 3 N -0.217 5.217 4 C -0.173 4.173 5 C -0.142 4.142 6 N -0.132 5.132 7 C 0.001 3.999 8 C -0.142 4.142 9 H 0.123 0.877 10 C 0.299 3.701 11 O -0.411 6.411 12 N -0.354 5.354 13 C 0.139 3.861 14 H 0.104 0.896 15 C -0.591 4.591 16 H 0.096 0.904 17 C -0.144 4.144 18 N -0.471 5.471 19 Si 0.742 3.258 20 H -0.201 1.201 21 H -0.207 1.207 22 H -0.195 1.195 23 C 0.360 3.640 24 F -0.191 7.191 25 F -0.117 7.117 26 F -0.200 7.200 27 C -0.155 4.155 28 C -0.081 4.081 29 H 0.098 0.902 30 H 0.107 0.893 31 H 0.093 0.907 32 H 0.185 0.815 33 H 0.116 0.884 34 H 0.116 0.884 35 H 0.234 0.766 36 H 0.080 0.920 37 H 0.095 0.905 38 H 0.106 0.894 39 H 0.104 0.896 40 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -0.256 13.391 -0.394 13.399 hybrid contribution 1.331 -1.439 -0.451 2.011 sum 1.075 11.952 -0.845 12.030 Atomic orbital electron populations 1.20183 0.85030 1.04014 1.03495 1.23092 0.95618 0.81159 1.05643 1.70431 1.01993 1.28077 1.21174 1.21778 0.94796 0.91918 1.08848 1.21169 0.85753 0.95428 1.11838 1.45321 1.06375 1.07328 1.54181 1.21727 0.97290 0.76193 1.04683 1.21570 0.96376 0.93239 1.02984 0.87676 1.20079 0.84795 0.86811 0.78370 1.90727 1.23089 1.82609 1.44664 1.46045 1.17750 1.07025 1.64596 1.19769 0.98211 0.76661 0.91421 0.89611 1.20854 0.90888 0.92871 1.54491 0.90388 1.25085 0.97602 0.97565 0.94114 1.70387 1.23837 1.10540 1.42371 0.86201 0.81974 0.79002 0.78627 1.20133 1.20740 1.19465 1.23152 0.76609 0.78140 0.86084 1.92995 1.74633 1.95905 1.55549 1.93412 1.93276 1.30910 1.94074 1.93067 1.51380 1.79228 1.96369 1.21744 0.96464 0.97053 1.00234 1.20276 0.92958 0.91937 1.02960 0.90235 0.89299 0.90681 0.81508 0.88423 0.88401 0.76586 0.91997 0.90508 0.89408 0.89631 0.89166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.64 10.24 36.01 0.37 -0.27 16 2 C 0.21 2.68 7.94 -155.76 -1.24 1.44 16 3 N -0.50 -7.18 11.27 -11.02 -0.12 -7.30 16 4 C -0.03 -0.33 11.84 -17.95 -0.21 -0.54 16 5 C -0.03 -0.33 6.57 -81.72 -0.54 -0.86 16 6 N -0.45 -5.63 3.13 -109.43 -0.34 -5.98 16 7 C 0.12 1.52 5.31 -3.91 -0.02 1.50 16 8 C -0.12 -1.49 2.51 -91.57 -0.23 -1.72 16 9 H 0.11 1.20 8.11 -51.93 -0.42 0.78 16 10 C 0.52 8.81 6.69 -10.98 -0.07 8.73 16 11 O -0.53 -11.08 14.41 5.55 0.08 -11.00 16 12 N -0.71 -12.83 4.80 -54.93 -0.26 -13.09 16 13 C 0.24 5.67 2.21 -69.09 -0.15 5.51 16 14 H 0.09 2.24 7.58 -51.93 -0.39 1.84 16 15 C -0.55 -13.30 8.46 -34.44 -0.29 -13.59 16 16 H 0.08 1.75 7.74 -52.48 -0.41 1.34 16 17 C 0.07 1.63 5.20 -17.82 -0.09 1.54 16 18 N -0.84 -22.12 9.50 55.43 0.53 -21.59 16 19 Si 0.92 19.26 29.54 -169.99 -5.02 14.24 16 20 H -0.28 -5.73 7.11 56.52 0.40 -5.33 16 21 H -0.28 -5.99 7.11 56.52 0.40 -5.58 16 22 H -0.27 -5.55 7.11 56.52 0.40 -5.15 16 23 C 0.42 10.14 2.81 37.16 0.10 10.25 16 24 F -0.21 -4.90 16.94 2.25 0.04 -4.87 16 25 F -0.14 -3.62 12.91 2.25 0.03 -3.59 16 26 F -0.22 -5.25 15.68 2.25 0.04 -5.21 16 27 C -0.12 -1.22 5.25 -26.28 -0.14 -1.35 16 28 C -0.04 -0.39 6.31 -27.49 -0.17 -0.56 16 29 H 0.08 0.66 8.14 -51.93 -0.42 0.23 16 30 H 0.09 0.75 8.14 -51.93 -0.42 0.33 16 31 H 0.07 0.63 7.95 -51.93 -0.41 0.21 16 32 H 0.17 1.67 8.06 -52.49 -0.42 1.25 16 33 H 0.10 1.27 7.82 -51.93 -0.41 0.86 16 34 H 0.10 1.17 8.14 -51.93 -0.42 0.75 16 35 H 0.40 6.16 7.86 -40.82 -0.32 5.84 16 36 H 0.27 6.76 8.31 -40.82 -0.34 6.42 16 37 H 0.08 0.86 8.12 -51.93 -0.42 0.44 16 38 H 0.09 0.84 7.30 -51.93 -0.38 0.46 16 39 H 0.09 0.67 8.14 -51.93 -0.42 0.25 16 40 H 0.09 0.68 8.14 -51.93 -0.42 0.26 16 LS Contribution 340.38 15.07 5.13 5.13 Total: -1.00 -30.56 340.38 -7.43 -37.99 By element: Atomic # 1 Polarization: 10.04 SS G_CDS: -4.83 Total: 5.21 kcal Atomic # 6 Polarization: 12.76 SS G_CDS: -2.69 Total: 10.07 kcal Atomic # 7 Polarization: -47.76 SS G_CDS: -0.20 Total: -47.96 kcal Atomic # 8 Polarization: -11.08 SS G_CDS: 0.08 Total: -11.00 kcal Atomic # 9 Polarization: -13.77 SS G_CDS: 0.10 Total: -13.67 kcal Atomic # 14 Polarization: 19.26 SS G_CDS: -5.02 Total: 14.24 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -30.56 -7.43 -37.99 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928803870.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.256 kcal (2) G-P(sol) polarization free energy of solvation -30.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.991 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds