Wall clock time and date at job start Tue Mar 31 2020 16:12:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.30786 * 125.72293 * 2 1 4 4 C 1.34422 * 109.32116 * 179.97438 * 3 2 1 5 5 C 1.33864 * 107.79920 * 359.97438 * 4 3 2 6 6 N 1.34402 * 125.72338 * 180.02562 * 2 1 3 7 7 C 1.46476 * 128.44228 * 0.17250 * 6 2 1 8 8 C 1.53283 * 108.69480 * 162.68592 * 7 6 2 9 9 C 1.53122 * 109.70350 * 50.75806 * 8 7 6 10 10 H 1.09004 * 109.49741 * 50.02391 * 9 8 7 11 11 C 1.50694 * 109.49995 * 170.09643 * 9 8 7 12 12 O 1.21286 * 120.00069 * 359.97438 * 11 9 8 13 13 N 1.34774 * 120.00329 * 179.97438 * 11 9 8 14 14 C 1.46501 * 120.00249 * 180.02562 * 13 11 9 15 15 H 1.09007 * 109.46748 * 325.00117 * 14 13 11 16 16 C 1.50703 * 109.46926 * 205.00408 * 14 13 11 17 17 H 1.07990 * 120.00428 * 359.97438 * 16 14 13 18 18 C 1.37881 * 119.99634 * 179.97438 * 16 14 13 19 19 N 1.31514 * 120.00434 * 359.97438 * 18 16 14 20 20 Si 1.86807 * 119.99900 * 179.97438 * 18 16 14 21 21 H 1.48498 * 109.46876 * 59.99884 * 20 18 16 22 22 H 1.48495 * 109.47039 * 180.02562 * 20 18 16 23 23 H 1.48506 * 109.46702 * 300.00165 * 20 18 16 24 24 C 1.52997 * 109.47485 * 84.99939 * 14 13 11 25 25 F 1.39906 * 109.46628 * 60.00149 * 24 14 13 26 26 F 1.39892 * 109.47224 * 180.02562 * 24 14 13 27 27 F 1.39897 * 109.47234 * 300.00528 * 24 14 13 28 28 C 1.50708 * 128.68505 * 180.33235 * 5 4 3 29 29 H 1.09000 * 109.47313 * 89.96679 * 1 2 3 30 30 H 1.09000 * 109.46750 * 209.97610 * 1 2 3 31 31 H 1.09003 * 109.46677 * 329.97453 * 1 2 3 32 32 H 1.07999 * 126.10462 * 179.97438 * 4 3 2 33 33 H 1.09002 * 109.59498 * 282.44768 * 7 6 2 34 34 H 1.09004 * 109.60028 * 42.76417 * 7 6 2 35 35 H 1.09000 * 109.43409 * 170.82896 * 8 7 6 36 36 H 1.08995 * 109.42978 * 290.68805 * 8 7 6 37 37 H 0.96999 * 119.99831 * 0.02562 * 13 11 9 38 38 H 0.96998 * 120.00634 * 179.97438 * 19 18 16 39 39 H 1.09000 * 109.74427 * 283.85983 * 28 5 4 40 40 H 1.09001 * 109.74199 * 44.57645 * 28 5 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2706 1.0618 0.0000 4 6 3.5602 0.6822 0.0006 5 6 3.5928 -0.6560 0.0015 6 7 2.2918 -1.0911 -0.0005 7 6 1.8921 -2.5003 -0.0046 8 6 3.0927 -3.3503 -0.4356 9 6 4.3185 -2.9744 0.4015 10 1 4.0539 -2.9848 1.4590 11 6 5.4234 -3.9677 0.1497 12 8 5.2486 -4.8863 -0.6227 13 7 6.6058 -3.8353 0.7827 14 6 7.6802 -4.8006 0.5374 15 1 7.2507 -5.7903 0.3811 16 6 8.6046 -4.8364 1.7270 17 1 8.4115 -4.2031 2.5802 18 6 9.6971 -5.6776 1.7260 19 7 9.9320 -6.4492 0.6873 20 14 10.8435 -5.7215 3.2003 21 1 10.0806 -6.1254 4.4087 22 1 11.9323 -6.7000 2.9517 23 1 11.4289 -4.3732 3.4123 24 6 8.4663 -4.3836 -0.7072 25 9 9.0175 -3.1134 -0.5065 26 9 9.4918 -5.3057 -0.9417 27 9 7.6081 -4.3503 -1.8115 28 6 4.7918 -1.5690 0.0092 29 1 -0.3634 0.0006 -1.0276 30 1 -0.3633 -0.8902 0.5135 31 1 -0.3633 0.8898 0.5143 32 1 4.4170 1.3396 0.0003 33 1 1.5770 -2.7938 0.9968 34 1 1.0688 -2.6449 -0.7041 35 1 2.8620 -4.4052 -0.2876 36 1 3.3044 -3.1705 -1.4896 37 1 6.7455 -3.1009 1.4007 38 1 10.7008 -7.0408 0.6864 39 1 5.2397 -1.5971 -0.9841 40 1 5.5231 -1.2103 0.7335 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000928803884.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:12:35 Heat of formation + Delta-G solvation = -124.119532 kcal Electronic energy + Delta-G solvation = -29557.598347 eV Core-core repulsion = 24958.528603 eV Total energy + Delta-G solvation = -4599.069744 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 331.125 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -48.41352 -46.06871 -45.67574 -42.46115 -39.46619 -36.32966 -34.75519 -33.57280 -32.60064 -31.32536 -29.89871 -28.56190 -26.60587 -24.65147 -24.35711 -23.04997 -21.31057 -20.74908 -19.92387 -19.02910 -17.62443 -16.98949 -16.79033 -16.70094 -16.58721 -15.98416 -15.76691 -15.06210 -14.84003 -14.54024 -14.13322 -14.04453 -13.77382 -13.39556 -13.33665 -13.07569 -13.00201 -12.88127 -12.63962 -12.52354 -12.46452 -12.34115 -12.05910 -11.98465 -11.89989 -11.78555 -11.32465 -11.15003 -11.12732 -10.91903 -10.85187 -10.47000 -10.03007 -9.75326 -9.58114 -9.29320 -8.78743 -8.37709 -8.23953 -6.29968 -4.54615 1.96027 2.65281 3.01442 3.07446 3.15837 3.21114 3.22238 3.60213 4.14994 4.27903 4.36482 4.44355 4.49478 4.55746 4.71390 4.87008 4.89153 4.97126 5.07784 5.19934 5.26747 5.34861 5.40410 5.56502 5.60102 5.64622 5.76835 5.80392 5.80982 5.89327 6.03191 6.14607 6.33203 6.71499 6.84260 7.05140 7.14180 7.38483 7.56355 8.03516 8.19173 8.42029 8.73958 9.13668 10.61630 Molecular weight = 331.12amu Principal moments of inertia in cm(-1) A = 0.021646 B = 0.003225 C = 0.003157 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1293.207046 B = 8681.080344 C = 8867.372698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 C 0.200 3.800 3 N -0.495 5.495 4 C -0.023 4.023 5 C -0.016 4.016 6 N -0.452 5.452 7 C 0.104 3.896 8 C -0.113 4.113 9 C -0.110 4.110 10 H 0.099 0.901 11 C 0.512 3.488 12 O -0.534 6.534 13 N -0.708 5.708 14 C 0.245 3.755 15 H 0.085 0.915 16 C -0.554 4.554 17 H 0.077 0.923 18 C 0.066 3.934 19 N -0.839 5.839 20 Si 0.915 3.085 21 H -0.273 1.273 22 H -0.283 1.283 23 H -0.272 1.272 24 C 0.417 3.583 25 F -0.209 7.209 26 F -0.137 7.137 27 F -0.218 7.218 28 C -0.037 4.037 29 H 0.078 0.922 30 H 0.071 0.929 31 H 0.088 0.912 32 H 0.170 0.830 33 H 0.086 0.914 34 H 0.093 0.907 35 H 0.100 0.900 36 H 0.081 0.919 37 H 0.399 0.601 38 H 0.269 0.731 39 H 0.089 0.911 40 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.022 7.661 0.615 15.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.124 4.124 2 C -0.062 4.062 3 N -0.214 5.214 4 C -0.170 4.170 5 C -0.130 4.130 6 N -0.136 5.136 7 C -0.019 4.019 8 C -0.151 4.151 9 C -0.132 4.132 10 H 0.117 0.883 11 C 0.297 3.703 12 O -0.410 6.410 13 N -0.357 5.357 14 C 0.139 3.861 15 H 0.103 0.897 16 C -0.591 4.591 17 H 0.095 0.905 18 C -0.143 4.143 19 N -0.472 5.472 20 Si 0.741 3.259 21 H -0.198 1.198 22 H -0.208 1.208 23 H -0.198 1.198 24 C 0.361 3.639 25 F -0.190 7.190 26 F -0.118 7.118 27 F -0.200 7.200 28 C -0.076 4.076 29 H 0.096 0.904 30 H 0.090 0.910 31 H 0.107 0.893 32 H 0.187 0.813 33 H 0.104 0.896 34 H 0.111 0.889 35 H 0.118 0.882 36 H 0.099 0.901 37 H 0.233 0.767 38 H 0.080 0.920 39 H 0.107 0.893 40 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -14.329 7.483 -0.062 16.166 hybrid contribution 1.287 -0.430 0.731 1.541 sum -13.042 7.053 0.669 14.842 Atomic orbital electron populations 1.20136 0.85130 1.03792 1.03306 1.23074 0.95529 0.81379 1.06171 1.70429 1.02011 1.28124 1.20869 1.21819 0.94779 0.91927 1.08478 1.21042 0.85359 0.95310 1.11325 1.45305 1.06308 1.07282 1.54713 1.22058 0.98986 0.77638 1.03180 1.21676 0.91754 1.00691 1.00982 1.21393 0.95030 0.94675 1.02107 0.88267 1.20277 0.83429 0.85862 0.80770 1.90710 1.81337 1.33499 1.35475 1.46088 1.13044 1.31228 1.45358 1.19733 0.84725 0.90344 0.91257 0.89741 1.20834 1.10637 1.26350 1.01311 0.90467 1.25083 0.97507 0.94912 0.96847 1.70378 1.28221 1.21671 1.26960 0.86270 0.79699 0.78315 0.81579 1.19771 1.20846 1.19751 1.23131 0.80203 0.74571 0.86031 1.92994 1.87214 1.43531 1.95307 1.93405 1.59568 1.64059 1.94747 1.93066 1.71404 1.96440 1.59113 1.20191 0.93203 0.90290 1.03913 0.90370 0.91026 0.89316 0.81274 0.89622 0.88865 0.88185 0.90063 0.76683 0.91987 0.89260 0.88647 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.07 -0.49 10.24 36.01 0.37 -0.12 16 2 C 0.20 2.37 7.94 -155.76 -1.24 1.13 16 3 N -0.49 -7.05 11.27 -11.02 -0.12 -7.17 16 4 C -0.02 -0.30 11.84 -17.95 -0.21 -0.52 16 5 C -0.02 -0.20 6.57 -81.73 -0.54 -0.74 16 6 N -0.45 -5.15 3.13 -109.42 -0.34 -5.49 16 7 C 0.10 0.90 6.60 -3.91 -0.03 0.88 16 8 C -0.11 -1.26 4.66 -26.52 -0.12 -1.39 16 9 C -0.11 -1.39 2.54 -91.50 -0.23 -1.62 16 10 H 0.10 1.10 8.12 -51.93 -0.42 0.68 16 11 C 0.51 8.99 6.67 -10.99 -0.07 8.92 16 12 O -0.53 -11.40 14.39 5.55 0.08 -11.32 16 13 N -0.71 -13.28 4.89 -54.93 -0.27 -13.55 16 14 C 0.24 5.79 2.21 -69.08 -0.15 5.64 16 15 H 0.09 2.25 7.58 -51.93 -0.39 1.86 16 16 C -0.55 -13.61 8.47 -34.44 -0.29 -13.90 16 17 H 0.08 1.78 7.74 -52.49 -0.41 1.37 16 18 C 0.07 1.66 5.20 -17.82 -0.09 1.57 16 19 N -0.84 -22.48 9.51 55.43 0.53 -21.95 16 20 Si 0.92 19.59 29.54 -169.99 -5.02 14.57 16 21 H -0.27 -5.71 7.11 56.52 0.40 -5.31 16 22 H -0.28 -6.07 7.11 56.52 0.40 -5.67 16 23 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 24 C 0.42 10.31 2.81 37.16 0.10 10.42 16 25 F -0.21 -4.96 16.94 2.25 0.04 -4.92 16 26 F -0.14 -3.70 12.92 2.25 0.03 -3.67 16 27 F -0.22 -5.34 15.68 2.25 0.04 -5.30 16 28 C -0.04 -0.45 5.45 -27.67 -0.15 -0.60 16 29 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 30 H 0.07 0.39 7.95 -51.93 -0.41 -0.02 16 31 H 0.09 0.62 8.14 -51.93 -0.42 0.20 16 32 H 0.17 1.92 8.06 -52.49 -0.42 1.49 16 33 H 0.09 0.62 8.14 -51.93 -0.42 0.20 16 34 H 0.09 0.63 8.14 -51.93 -0.42 0.20 16 35 H 0.10 1.12 7.77 -51.93 -0.40 0.72 16 36 H 0.08 1.02 8.12 -51.93 -0.42 0.60 16 37 H 0.40 6.41 8.26 -40.82 -0.34 6.07 16 38 H 0.27 6.87 8.31 -40.82 -0.34 6.53 16 39 H 0.09 1.18 8.10 -51.93 -0.42 0.76 16 40 H 0.10 1.03 7.95 -51.93 -0.41 0.61 16 LS Contribution 341.30 15.07 5.14 5.14 Total: -1.00 -31.56 341.30 -7.44 -38.99 By element: Atomic # 1 Polarization: 9.87 SS G_CDS: -4.88 Total: 4.99 kcal Atomic # 6 Polarization: 12.33 SS G_CDS: -2.66 Total: 9.67 kcal Atomic # 7 Polarization: -47.95 SS G_CDS: -0.21 Total: -48.16 kcal Atomic # 8 Polarization: -11.40 SS G_CDS: 0.08 Total: -11.32 kcal Atomic # 9 Polarization: -14.00 SS G_CDS: 0.10 Total: -13.90 kcal Atomic # 14 Polarization: 19.59 SS G_CDS: -5.02 Total: 14.57 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -31.56 -7.44 -38.99 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000928803884.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.125 kcal (2) G-P(sol) polarization free energy of solvation -31.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.681 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.995 kcal (6) G-S(sol) free energy of system = (1) + (5) -124.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds