Wall clock time and date at job start Tue Mar 31 2020 16:39:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.42901 * 113.99645 * 2 1 4 4 C 1.53006 * 109.46793 * 179.97438 * 3 2 1 5 5 N 1.46493 * 109.47238 * 64.99777 * 4 3 2 6 6 C 1.37099 * 119.99871 * 269.99769 * 5 4 3 7 7 H 1.07997 * 120.00403 * 142.96903 * 6 5 4 8 8 C 1.38952 * 120.00049 * 322.97003 * 6 5 4 9 9 N 1.31408 * 120.00640 * 158.84890 * 8 6 5 10 10 Si 1.86808 * 119.99933 * 338.84727 * 8 6 5 11 11 H 1.48498 * 109.46981 * 95.26016 * 10 8 6 12 12 H 1.48499 * 109.47134 * 215.26184 * 10 8 6 13 13 H 1.48508 * 109.46839 * 335.26380 * 10 8 6 14 14 C 1.34772 * 120.00640 * 90.00292 * 5 4 3 15 15 O 1.21297 * 119.99345 * 356.00602 * 14 5 4 16 16 C 1.50697 * 120.00590 * 176.00898 * 14 5 4 17 17 C 1.50695 * 109.47483 * 185.82048 * 16 14 5 18 18 C 1.38223 * 120.42549 * 267.07987 * 17 16 14 19 19 N 1.31849 * 120.76703 * 179.97438 * 18 17 16 20 20 C 1.31894 * 121.72743 * 359.97438 * 19 18 17 21 21 C 1.38176 * 120.76065 * 359.97438 * 20 19 18 22 22 C 1.38637 * 120.41371 * 87.03267 * 17 16 14 23 23 C 1.50690 * 120.79098 * 0.02562 * 22 17 16 24 24 F 1.39902 * 109.47134 * 180.64398 * 23 22 17 25 25 F 1.39906 * 109.47010 * 300.64420 * 23 22 17 26 26 F 1.39897 * 109.47459 * 60.64522 * 23 22 17 27 27 H 1.08998 * 109.48077 * 300.00633 * 1 2 3 28 28 H 1.09005 * 109.47264 * 60.00857 * 1 2 3 29 29 H 1.09005 * 109.47136 * 180.02562 * 1 2 3 30 30 H 1.08996 * 109.47884 * 59.99110 * 3 2 1 31 31 H 1.09008 * 109.47047 * 299.99163 * 3 2 1 32 32 H 1.08994 * 109.46875 * 304.99131 * 4 3 2 33 33 H 1.09003 * 109.46778 * 184.99564 * 4 3 2 34 34 H 0.96996 * 120.00764 * 179.97438 * 9 8 6 35 35 H 1.09007 * 109.46727 * 65.82756 * 16 14 5 36 36 H 1.08998 * 109.47243 * 305.83049 * 16 14 5 37 37 H 1.07998 * 119.61941 * 359.94973 * 18 17 16 38 38 H 1.08001 * 119.61860 * 180.02562 * 20 19 18 39 39 H 1.08000 * 120.41566 * 179.74836 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 7 3.9766 0.5640 -1.2508 6 6 4.0980 -0.7991 -1.3343 7 1 3.8317 -1.3100 -2.2478 8 6 4.5635 -1.5233 -0.2437 9 7 4.3018 -2.8074 -0.1475 10 14 5.5616 -0.6714 1.0859 11 1 4.6627 -0.2655 2.1960 12 1 6.5960 -1.6035 1.6021 13 1 6.2195 0.5321 0.5164 14 6 4.2634 1.3327 -2.3199 15 8 4.0871 2.5318 -2.2694 16 6 4.8030 0.7028 -3.5781 17 6 5.1723 1.7827 -4.5622 18 6 4.2617 2.2052 -5.5123 19 7 4.5775 3.1498 -6.3762 20 6 5.7637 3.7266 -6.3705 21 6 6.7248 3.3568 -5.4492 22 6 6.4296 2.3657 -4.5253 23 6 7.4506 1.9336 -3.5047 24 9 8.6214 2.6811 -3.6709 25 9 6.9419 2.1434 -2.2184 26 9 7.7364 0.5750 -3.6772 27 1 -0.3635 0.5139 0.8899 28 1 -0.3634 0.5137 -0.8901 29 1 -0.3634 -1.0277 0.0005 30 1 1.6884 1.8465 0.8898 31 1 1.6886 1.8464 -0.8901 32 1 3.8507 0.5687 0.8428 33 1 3.9784 2.1766 0.0901 34 1 4.6271 -3.3131 0.6137 35 1 4.0419 0.0570 -4.0162 36 1 5.6869 0.1118 -3.3384 37 1 3.2801 1.7561 -5.5478 38 1 5.9859 4.4973 -7.0936 39 1 7.6957 3.8299 -5.4521 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000518794582.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:39:37 Heat of formation + Delta-G solvation = -171.721797 kcal Electronic energy + Delta-G solvation = -30385.903923 eV Core-core repulsion = 25687.051328 eV Total energy + Delta-G solvation = -4698.852595 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 332.113 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -49.98767 -47.55569 -47.32734 -40.39569 -38.87355 -37.06722 -34.91684 -33.74552 -32.32804 -31.96801 -29.81305 -27.81021 -26.32700 -25.78337 -24.70026 -23.16178 -22.55676 -21.76643 -19.08390 -18.46540 -18.39755 -18.23673 -17.10705 -16.52705 -16.25625 -15.84276 -15.54798 -15.29856 -15.14149 -14.63680 -14.55977 -14.36986 -14.18818 -14.00694 -13.96298 -13.82529 -13.55968 -13.50852 -13.38933 -13.12002 -12.66049 -12.52649 -12.15785 -11.95298 -11.83160 -11.60425 -11.42629 -11.10745 -10.88837 -10.78262 -10.15275 -10.06579 -9.88714 -9.58901 -9.25738 -9.08487 -9.02035 -8.55900 -7.84146 -6.43821 -4.01586 0.87367 1.06723 2.75705 3.06061 3.22702 3.30254 3.60439 3.63113 3.80651 4.11195 4.14636 4.27038 4.40358 4.46628 4.60014 4.80025 4.85039 5.00085 5.04288 5.33781 5.54351 5.59313 5.65813 5.67647 5.76683 5.82323 5.84457 5.93842 5.99026 6.06484 6.15968 6.25074 6.29511 6.44930 6.57415 7.30984 7.80384 7.85957 8.06893 8.23370 8.95372 9.32386 9.63450 10.66951 Molecular weight = 332.11amu Principal moments of inertia in cm(-1) A = 0.013653 B = 0.005341 C = 0.004386 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2050.322835 B = 5241.285867 C = 6382.240400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.355 6.355 3 C 0.056 3.944 4 C 0.102 3.898 5 N -0.448 5.448 6 C -0.335 4.335 7 H 0.103 0.897 8 C 0.078 3.922 9 N -0.852 5.852 10 Si 0.867 3.133 11 H -0.274 1.274 12 H -0.288 1.288 13 H -0.260 1.260 14 C 0.482 3.518 15 O -0.596 6.596 16 C -0.103 4.103 17 C -0.043 4.043 18 C 0.114 3.886 19 N -0.463 5.463 20 C 0.087 3.913 21 C -0.127 4.127 22 C -0.131 4.131 23 C 0.506 3.494 24 F -0.181 7.181 25 F -0.157 7.157 26 F -0.170 7.170 27 H 0.029 0.971 28 H 0.032 0.968 29 H 0.081 0.919 30 H 0.042 0.958 31 H 0.049 0.951 32 H 0.074 0.926 33 H 0.084 0.916 34 H 0.274 0.726 35 H 0.107 0.893 36 H 0.110 0.890 37 H 0.165 0.835 38 H 0.163 0.837 39 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.046 8.146 -6.735 10.766 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.273 6.273 3 C -0.022 4.022 4 C -0.021 4.021 5 N -0.167 5.167 6 C -0.462 4.462 7 H 0.121 0.879 8 C -0.130 4.130 9 N -0.486 5.486 10 Si 0.695 3.305 11 H -0.201 1.201 12 H -0.215 1.215 13 H -0.184 1.184 14 C 0.271 3.729 15 O -0.482 6.482 16 C -0.143 4.143 17 C -0.046 4.046 18 C -0.044 4.044 19 N -0.170 5.170 20 C -0.070 4.070 21 C -0.147 4.147 22 C -0.141 4.141 23 C 0.452 3.548 24 F -0.162 7.162 25 F -0.138 7.138 26 F -0.151 7.151 27 H 0.047 0.953 28 H 0.051 0.949 29 H 0.099 0.901 30 H 0.060 0.940 31 H 0.067 0.933 32 H 0.091 0.909 33 H 0.102 0.898 34 H 0.084 0.916 35 H 0.126 0.874 36 H 0.128 0.872 37 H 0.182 0.818 38 H 0.180 0.820 39 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 1.498 8.608 -7.179 11.309 hybrid contribution 1.037 0.024 1.759 2.042 sum 2.535 8.632 -5.420 10.503 Atomic orbital electron populations 1.22655 0.83076 1.02085 0.98679 1.88235 1.17619 1.26476 1.94995 1.22844 0.94849 0.85272 0.99256 1.21734 0.92335 0.98868 0.89137 1.43570 1.56935 1.07013 1.09206 1.18937 1.45214 0.78804 1.03259 0.87910 1.25198 0.95496 0.95042 0.97255 1.69747 1.40693 1.07883 1.30306 0.87104 0.80653 0.80452 0.82294 1.20101 1.21472 1.18385 1.19852 0.81233 0.86160 0.85615 1.90567 1.58640 1.14794 1.84189 1.20689 1.04840 0.95697 0.93046 1.20472 0.92074 0.96122 0.95896 1.22688 0.98969 0.92760 0.89937 1.67666 1.19289 1.07151 1.22929 1.22692 0.88515 0.98491 0.97296 1.21939 1.01915 0.96062 0.94810 1.20271 0.95192 1.00694 0.97902 1.18189 0.79920 0.75163 0.81522 1.93139 1.50914 1.76688 1.95507 1.93342 1.86558 1.94408 1.39521 1.93210 1.93842 1.32705 1.95383 0.95265 0.94932 0.90072 0.94033 0.93260 0.90862 0.89804 0.91608 0.87450 0.87225 0.81783 0.81969 0.83631 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.52 11.01 101.05 1.11 1.63 16 2 O -0.36 -7.56 10.18 -35.23 -0.36 -7.91 16 3 C 0.06 1.10 6.28 37.16 0.23 1.33 16 4 C 0.10 2.26 4.60 -4.04 -0.02 2.25 16 5 N -0.45 -10.53 2.17 -114.82 -0.25 -10.78 16 6 C -0.34 -8.50 8.49 -14.93 -0.13 -8.62 16 7 H 0.10 2.70 7.39 -52.49 -0.39 2.31 16 8 C 0.08 2.05 5.33 -17.47 -0.09 1.96 16 9 N -0.85 -23.32 13.96 55.50 0.77 -22.55 16 10 Si 0.87 20.53 24.94 -169.99 -4.24 16.29 16 11 H -0.27 -6.29 6.68 56.52 0.38 -5.91 16 12 H -0.29 -6.77 7.11 56.52 0.40 -6.37 16 13 H -0.26 -6.21 7.11 56.52 0.40 -5.81 16 14 C 0.48 10.68 6.12 -10.99 -0.07 10.61 16 15 O -0.60 -14.05 15.45 5.54 0.09 -13.96 16 16 C -0.10 -1.92 3.89 -29.04 -0.11 -2.03 16 17 C -0.04 -0.72 4.37 -104.48 -0.46 -1.18 16 18 C 0.11 1.74 10.85 -17.55 -0.19 1.55 16 19 N -0.46 -6.73 10.36 -13.25 -0.14 -6.87 16 20 C 0.09 1.06 11.18 -17.55 -0.20 0.86 16 21 C -0.13 -1.64 9.50 -39.44 -0.37 -2.01 16 22 C -0.13 -2.09 5.40 -104.32 -0.56 -2.65 16 23 C 0.51 8.53 2.83 36.00 0.10 8.63 16 24 F -0.18 -2.69 16.08 2.25 0.04 -2.65 16 25 F -0.16 -3.16 15.05 2.25 0.03 -3.12 16 26 F -0.17 -2.90 15.50 2.25 0.03 -2.86 16 27 H 0.03 0.40 8.14 -51.93 -0.42 -0.02 16 28 H 0.03 0.48 8.14 -51.93 -0.42 0.05 16 29 H 0.08 1.21 8.14 -51.93 -0.42 0.79 16 30 H 0.04 0.70 8.14 -51.93 -0.42 0.28 16 31 H 0.05 0.97 8.14 -51.92 -0.42 0.55 16 32 H 0.07 1.69 3.10 -51.93 -0.16 1.53 16 33 H 0.08 1.78 7.48 -51.93 -0.39 1.40 16 34 H 0.27 7.06 8.31 -40.82 -0.34 6.72 16 35 H 0.11 1.82 7.78 -51.93 -0.40 1.42 16 36 H 0.11 2.12 5.72 -51.93 -0.30 1.83 16 37 H 0.17 2.19 8.06 -52.49 -0.42 1.77 16 38 H 0.16 1.36 8.06 -52.49 -0.42 0.94 16 39 H 0.15 1.47 7.27 -52.49 -0.38 1.09 16 LS Contribution 338.31 15.07 5.10 5.10 Total: -1.00 -30.64 338.31 -3.81 -34.45 By element: Atomic # 1 Polarization: 6.69 SS G_CDS: -4.14 Total: 2.55 kcal Atomic # 6 Polarization: 13.07 SS G_CDS: -0.75 Total: 12.32 kcal Atomic # 7 Polarization: -40.58 SS G_CDS: 0.39 Total: -40.19 kcal Atomic # 8 Polarization: -21.60 SS G_CDS: -0.27 Total: -21.88 kcal Atomic # 9 Polarization: -8.74 SS G_CDS: 0.11 Total: -8.64 kcal Atomic # 14 Polarization: 20.53 SS G_CDS: -4.24 Total: 16.29 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -30.64 -3.81 -34.45 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000518794582.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.271 kcal (2) G-P(sol) polarization free energy of solvation -30.641 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -167.911 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.810 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.451 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds