Wall clock time and date at job start Tue Mar 31 2020 17:06:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09004 * 110.05873 * 2 1 4 4 C 1.54269 * 110.03167 * 121.41677 * 2 1 3 5 5 C 1.54894 * 104.19545 * 142.89375 * 4 2 1 6 6 C 1.55014 * 102.75459 * 322.04605 * 5 4 2 7 7 C 1.53876 * 110.03339 * 238.58093 * 2 1 3 8 8 H 1.09001 * 110.02863 * 0.05051 * 7 2 1 9 9 N 1.46500 * 110.03173 * 121.42739 * 7 2 1 10 10 C 1.34772 * 120.00219 * 204.30766 * 9 7 2 11 11 O 1.21363 * 120.00079 * 0.02562 * 10 9 7 12 12 C 1.49352 * 120.00190 * 180.02562 * 10 9 7 13 13 O 1.21373 * 120.00229 * 0.02562 * 12 10 9 14 14 N 1.34780 * 120.00420 * 180.02562 * 12 10 9 15 15 C 1.39714 * 120.00430 * 184.24513 * 14 12 10 16 16 C 1.39028 * 120.04028 * 324.63376 * 15 14 12 17 17 C 1.38144 * 120.05921 * 179.70219 * 16 15 14 18 18 C 1.38180 * 120.14536 * 0.59319 * 17 16 15 19 19 C 1.38916 * 120.08157 * 359.68197 * 18 17 16 20 20 O 1.35751 * 120.03005 * 179.97438 * 19 18 17 21 21 C 1.34835 * 116.99817 * 185.36087 * 20 19 18 22 22 H 1.07998 * 120.00100 * 354.97191 * 21 20 19 23 23 C 1.38656 * 119.99757 * 174.96550 * 21 20 19 24 24 N 1.31563 * 119.99975 * 180.02562 * 23 21 20 25 25 Si 1.86799 * 120.00056 * 0.02562 * 23 21 20 26 26 H 1.48504 * 109.47036 * 89.99888 * 25 23 21 27 27 H 1.48495 * 109.47253 * 209.99973 * 25 23 21 28 28 H 1.48500 * 109.47368 * 330.00166 * 25 23 21 29 29 C 1.38762 * 119.93942 * 0.02562 * 19 18 17 30 30 H 1.08996 * 109.46890 * 181.41977 * 1 2 3 31 31 H 1.09000 * 109.47013 * 301.41918 * 1 2 3 32 32 H 1.09001 * 109.46920 * 61.41474 * 1 2 3 33 33 H 1.09004 * 110.48698 * 261.56729 * 4 2 1 34 34 H 1.08990 * 110.48982 * 24.21799 * 4 2 1 35 35 H 1.09007 * 110.75505 * 80.37031 * 5 4 2 36 36 H 1.08997 * 110.75595 * 203.55700 * 5 4 2 37 37 H 1.09001 * 110.50590 * 279.29650 * 6 5 4 38 38 H 1.09001 * 110.52532 * 156.61521 * 6 5 4 39 39 H 0.96999 * 119.99771 * 24.32192 * 9 7 2 40 40 H 0.97003 * 119.99238 * 4.51944 * 14 12 10 41 41 H 1.07997 * 119.96530 * 359.97438 * 16 15 14 42 42 H 1.08003 * 119.92503 * 180.32591 * 17 16 15 43 43 H 1.07996 * 119.96034 * 179.70843 * 18 17 16 44 44 H 0.96992 * 119.99806 * 179.97438 * 24 23 21 45 45 H 1.08005 * 120.07049 * 180.02562 * 29 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.9038 1.0239 0.0000 4 6 2.0584 -0.7555 1.2369 5 6 3.3137 -1.5008 0.7191 6 6 2.8871 -1.9414 -0.7046 7 6 2.0571 -0.7536 -1.2337 8 1 1.2229 -1.1186 -1.8328 9 7 2.9033 0.1310 -2.0385 10 6 3.0712 -0.1101 -3.3537 11 8 2.5211 -1.0599 -3.8716 12 6 3.9343 0.7914 -4.1741 13 8 4.4848 1.7410 -3.6561 14 7 4.1018 0.5506 -5.4895 15 6 4.9783 1.3400 -6.2382 16 6 5.1089 2.6950 -5.9554 17 6 5.9800 3.4746 -6.6915 18 6 6.7149 2.9137 -7.7184 19 6 6.5848 1.5617 -8.0099 20 8 7.3068 1.0117 -9.0194 21 6 7.0524 -0.2773 -9.3223 22 1 6.3619 -0.8476 -8.7188 23 6 7.6773 -0.8705 -10.4086 24 7 7.4288 -2.1281 -10.7045 25 14 8.8722 0.1159 -11.4520 26 1 10.2440 -0.0259 -10.9013 27 1 8.8445 -0.3897 -12.8480 28 1 8.4780 1.5476 -11.4362 29 6 5.7153 0.7740 -7.2688 30 1 -0.3633 -1.0273 0.0255 31 1 -0.3633 0.5357 0.8770 32 1 -0.3633 0.4917 -0.9024 33 1 2.3298 -0.0536 2.0255 34 1 1.3143 -1.4660 1.5966 35 1 4.1710 -0.8291 0.6751 36 1 3.5344 -2.3660 1.3442 37 1 2.2764 -2.8430 -0.6583 38 1 3.7630 -2.1046 -1.3326 39 1 3.3428 0.8902 -1.6246 40 1 3.6108 -0.1683 -5.9173 41 1 4.5321 3.1374 -5.1568 42 1 6.0837 4.5259 -6.4665 43 1 7.3915 3.5270 -8.2950 44 1 7.8656 -2.5429 -11.4646 45 1 5.6128 -0.2775 -7.4933 RHF calculation, no. of doubly occupied orbitals= 62 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000264368137.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:06:04 Heat of formation + Delta-G solvation = -75.698430 kcal Electronic energy + Delta-G solvation = -27582.492515 eV Core-core repulsion = 23565.493640 eV Total energy + Delta-G solvation = -4016.998875 eV No. of doubly occupied orbitals = 62 Molecular weight (most abundant/longest-lived isotopes) = 332.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.05445 -39.80670 -38.87981 -38.05091 -36.68259 -34.69581 -33.71864 -32.38147 -31.64885 -29.67402 -29.07225 -28.37233 -25.89798 -25.27027 -24.37809 -21.94990 -21.84900 -21.04878 -20.43233 -19.89683 -18.69611 -17.90712 -17.60039 -16.98963 -16.30599 -16.01927 -15.55849 -15.44921 -15.11042 -14.91805 -14.51673 -14.11172 -14.05225 -13.88426 -13.85785 -13.52003 -13.31536 -13.16420 -12.71336 -12.37794 -12.23234 -12.02840 -11.94002 -11.79281 -11.64811 -11.40400 -11.20208 -11.13595 -11.04944 -11.01158 -10.99974 -10.80878 -10.29168 -9.97082 -9.57926 -9.48644 -9.43700 -8.88401 -7.91941 -7.38947 -6.44438 -4.12338 1.18391 1.98663 2.19193 2.31653 3.15821 3.22092 3.24262 3.38673 3.56124 4.02398 4.17325 4.21422 4.33651 4.41568 4.46499 4.80299 4.82253 4.95477 5.00736 5.05794 5.06900 5.14744 5.24017 5.39596 5.47873 5.50663 5.53214 5.60044 5.72130 5.77202 5.82854 5.83991 5.87412 5.95107 6.04175 6.09178 6.14979 6.39408 6.67294 6.75058 6.96969 7.09886 7.12791 7.38855 7.55031 7.66378 7.74895 7.95254 8.01231 8.90336 9.51013 10.63016 Molecular weight = 332.16amu Principal moments of inertia in cm(-1) A = 0.020404 B = 0.002284 C = 0.002142 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1371.972053 B =12256.639939 C =13068.775824 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.103 4.103 3 H 0.081 0.919 4 C -0.120 4.120 5 C -0.127 4.127 6 C -0.135 4.135 7 C 0.140 3.860 8 H 0.097 0.903 9 N -0.695 5.695 10 C 0.511 3.489 11 O -0.515 6.515 12 C 0.504 3.496 13 O -0.504 6.504 14 N -0.635 5.635 15 C 0.170 3.830 16 C -0.196 4.196 17 C -0.066 4.066 18 C -0.194 4.194 19 C 0.173 3.827 20 O -0.213 6.213 21 C -0.392 4.392 22 H 0.106 0.894 23 C 0.064 3.936 24 N -0.878 5.878 25 Si 0.906 3.094 26 H -0.273 1.273 27 H -0.282 1.282 28 H -0.259 1.259 29 C -0.237 4.237 30 H 0.059 0.941 31 H 0.059 0.941 32 H 0.057 0.943 33 H 0.068 0.932 34 H 0.071 0.929 35 H 0.068 0.932 36 H 0.069 0.931 37 H 0.078 0.922 38 H 0.072 0.928 39 H 0.412 0.588 40 H 0.420 0.580 41 H 0.126 0.874 42 H 0.120 0.880 43 H 0.120 0.880 44 H 0.280 0.720 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.793 4.363 21.680 25.063 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.122 4.122 3 H 0.100 0.900 4 C -0.157 4.157 5 C -0.164 4.164 6 C -0.174 4.174 7 C 0.036 3.964 8 H 0.115 0.885 9 N -0.348 5.348 10 C 0.291 3.709 11 O -0.390 6.390 12 C 0.285 3.715 13 O -0.379 6.379 14 N -0.281 5.281 15 C 0.077 3.923 16 C -0.217 4.217 17 C -0.085 4.085 18 C -0.214 4.214 19 C 0.120 3.880 20 O -0.118 6.118 21 C -0.467 4.467 22 H 0.123 0.877 23 C -0.139 4.139 24 N -0.516 5.516 25 Si 0.731 3.269 26 H -0.199 1.199 27 H -0.208 1.208 28 H -0.183 1.183 29 C -0.258 4.258 30 H 0.078 0.922 31 H 0.078 0.922 32 H 0.076 0.924 33 H 0.087 0.913 34 H 0.089 0.911 35 H 0.087 0.913 36 H 0.088 0.912 37 H 0.096 0.904 38 H 0.091 0.909 39 H 0.248 0.752 40 H 0.258 0.742 41 H 0.144 0.856 42 H 0.138 0.862 43 H 0.138 0.862 44 H 0.090 0.910 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -11.601 4.207 21.399 24.702 hybrid contribution 0.467 0.028 -0.521 0.700 sum -11.134 4.235 20.879 24.038 Atomic orbital electron populations 1.21863 0.93946 1.02269 1.02143 1.22062 0.96573 0.99852 0.93758 0.90044 1.22467 0.97513 0.99057 0.96701 1.22556 0.97717 1.00186 0.95991 1.22816 1.00378 0.97608 0.96572 1.21871 0.93119 0.89847 0.91544 0.88535 1.45923 1.49551 1.31446 1.07922 1.20091 0.82045 0.85403 0.83330 1.90788 1.47210 1.29284 1.71719 1.20104 0.82572 0.85703 0.83077 1.90762 1.46960 1.28606 1.71533 1.43117 1.42366 1.34780 1.07825 1.17424 0.92127 0.89930 0.92794 1.20732 1.04969 0.91805 1.04174 1.20549 0.95099 0.98744 0.94068 1.20300 1.06035 0.92694 1.02384 1.18784 0.89577 0.91541 0.88098 1.83601 1.54297 1.28565 1.45365 1.20747 1.28626 0.83124 1.14215 0.87674 1.24472 0.97639 0.95518 0.96306 1.69647 1.42342 1.11032 1.28542 0.86173 0.80819 0.81096 0.78782 1.19858 1.20796 1.18268 1.20978 1.02467 1.01603 1.00796 0.92179 0.92166 0.92369 0.91283 0.91068 0.91318 0.91228 0.90383 0.90895 0.75158 0.74219 0.85649 0.86242 0.86217 0.90994 0.84352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.80 8.85 37.16 0.33 -0.47 16 2 C -0.10 -0.63 3.27 -89.50 -0.29 -0.93 16 3 H 0.08 0.48 7.61 -51.93 -0.40 0.09 16 4 C -0.12 -0.65 6.36 -25.07 -0.16 -0.80 16 5 C -0.13 -0.82 6.91 -24.67 -0.17 -0.99 16 6 C -0.14 -1.10 6.54 -25.01 -0.16 -1.26 16 7 C 0.14 1.17 2.89 -66.81 -0.19 0.98 16 8 H 0.10 0.92 7.12 -51.93 -0.37 0.55 16 9 N -0.69 -6.90 5.03 -53.18 -0.27 -7.17 16 10 C 0.51 6.69 7.88 -11.63 -0.09 6.59 16 11 O -0.51 -7.77 16.15 5.49 0.09 -7.68 16 12 C 0.50 7.57 7.72 -11.63 -0.09 7.48 16 13 O -0.50 -8.21 13.93 5.48 0.08 -8.14 16 14 N -0.64 -10.20 5.32 -10.31 -0.05 -10.26 16 15 C 0.17 3.19 6.29 -83.78 -0.53 2.66 16 16 C -0.20 -3.51 8.69 -39.32 -0.34 -3.86 16 17 C -0.07 -1.13 10.03 -39.64 -0.40 -1.53 16 18 C -0.19 -3.79 9.99 -39.35 -0.39 -4.19 16 19 C 0.17 3.93 6.65 -39.14 -0.26 3.67 16 20 O -0.21 -5.54 8.58 0.03 0.00 -5.54 16 21 C -0.39 -10.88 9.95 30.89 0.31 -10.57 16 22 H 0.11 2.98 5.43 -52.49 -0.29 2.69 16 23 C 0.06 1.78 5.49 -17.51 -0.10 1.69 16 24 N -0.88 -25.16 13.96 55.48 0.77 -24.38 16 25 Si 0.91 21.45 28.62 -169.99 -4.86 16.59 16 26 H -0.27 -6.37 7.11 56.52 0.40 -5.96 16 27 H -0.28 -6.45 7.11 56.52 0.40 -6.05 16 28 H -0.26 -6.12 7.11 56.52 0.40 -5.72 16 29 C -0.24 -5.06 9.08 -39.19 -0.36 -5.42 16 30 H 0.06 0.32 8.12 -51.93 -0.42 -0.10 16 31 H 0.06 0.28 8.14 -51.93 -0.42 -0.14 16 32 H 0.06 0.36 8.14 -51.93 -0.42 -0.07 16 33 H 0.07 0.33 8.14 -51.93 -0.42 -0.09 16 34 H 0.07 0.35 7.84 -51.93 -0.41 -0.06 16 35 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 36 H 0.07 0.40 8.14 -51.93 -0.42 -0.02 16 37 H 0.08 0.59 8.14 -51.93 -0.42 0.16 16 38 H 0.07 0.73 8.04 -51.93 -0.42 0.31 16 39 H 0.41 3.62 7.78 -40.82 -0.32 3.30 16 40 H 0.42 6.19 8.30 -40.82 -0.34 5.85 16 41 H 0.13 2.15 6.25 -52.49 -0.33 1.82 16 42 H 0.12 1.66 8.06 -52.48 -0.42 1.23 16 43 H 0.12 2.14 8.06 -52.49 -0.42 1.72 16 44 H 0.28 7.41 8.31 -40.82 -0.34 7.07 16 45 H 0.14 3.08 5.63 -52.48 -0.30 2.78 16 LS Contribution 374.89 15.07 5.65 5.65 Total: -1.00 -30.87 374.89 -7.59 -38.46 By element: Atomic # 1 Polarization: 15.50 SS G_CDS: -6.09 Total: 9.41 kcal Atomic # 6 Polarization: -4.04 SS G_CDS: -2.90 Total: -6.94 kcal Atomic # 7 Polarization: -42.26 SS G_CDS: 0.45 Total: -41.81 kcal Atomic # 8 Polarization: -21.52 SS G_CDS: 0.17 Total: -21.36 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -4.86 Total: 16.59 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -30.87 -7.59 -38.46 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000264368137.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.240 kcal (2) G-P(sol) polarization free energy of solvation -30.873 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.586 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.459 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.698 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds