Wall clock time and date at job start Tue Mar 31 2020 16:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 N 1.32163 * 119.89874 * 2 1 4 4 C 1.32047 * 120.08060 * 179.74856 * 3 2 1 5 5 C 1.50697 * 120.06675 * 180.25274 * 4 3 2 6 6 C 1.39468 * 119.86555 * 0.52259 * 4 3 2 7 7 C 1.48178 * 120.09792 * 179.75348 * 6 4 3 8 8 O 1.35242 * 119.99665 * 172.66246 * 7 6 4 9 9 N 1.29887 * 120.00194 * 352.66577 * 7 6 4 10 10 C 1.46507 * 119.99868 * 179.97438 * 9 7 6 11 11 C 1.53001 * 109.46932 * 114.99865 * 10 9 7 12 12 C 1.53073 * 109.45095 * 64.78879 * 11 10 9 13 13 C 1.53187 * 109.29652 * 181.24267 * 12 11 10 14 14 N 1.46930 * 108.89201 * 305.57717 * 13 12 11 15 15 C 1.36931 * 120.63237 * 233.51321 * 14 13 12 16 16 H 1.07997 * 120.00013 * 141.43294 * 15 14 13 17 17 C 1.38810 * 120.00284 * 321.42798 * 15 14 13 18 18 N 1.31626 * 119.99847 * 351.92711 * 17 15 14 19 19 Si 1.86801 * 120.00383 * 171.92087 * 17 15 14 20 20 H 1.48502 * 109.46742 * 0.02562 * 19 17 15 21 21 H 1.48502 * 109.46863 * 120.00014 * 19 17 15 22 22 H 1.48501 * 109.47165 * 240.00135 * 19 17 15 23 23 C 1.46932 * 118.73627 * 53.54043 * 14 13 12 24 24 C 1.53033 * 109.45739 * 184.99772 * 11 10 9 25 25 N 1.32972 * 119.79996 * 359.47852 * 6 4 3 26 26 C 1.31894 * 119.91237 * 0.25385 * 25 6 4 27 27 C 1.50701 * 119.92860 * 179.97438 * 26 25 6 28 28 H 1.09003 * 109.47554 * 269.98443 * 1 2 3 29 29 H 1.09008 * 109.46539 * 29.98019 * 1 2 3 30 30 H 1.08996 * 109.47076 * 149.97558 * 1 2 3 31 31 H 1.09002 * 109.47185 * 263.18652 * 5 4 3 32 32 H 1.09004 * 109.47019 * 23.18560 * 5 4 3 33 33 H 1.09004 * 109.46988 * 143.18717 * 5 4 3 34 34 H 0.96703 * 114.00203 * 5.09919 * 8 7 6 35 35 H 1.08995 * 109.46990 * 354.99856 * 10 9 7 36 36 H 1.09000 * 109.46669 * 234.99585 * 10 9 7 37 37 H 1.08998 * 109.46089 * 304.97590 * 11 10 9 38 38 H 1.08997 * 109.39287 * 61.36732 * 12 11 10 39 39 H 1.09003 * 109.62609 * 301.25693 * 12 11 10 40 40 H 1.09004 * 109.59194 * 185.72207 * 13 12 11 41 41 H 1.09002 * 109.59190 * 65.43492 * 13 12 11 42 42 H 0.96995 * 120.00150 * 180.02562 * 18 17 15 43 43 H 1.08996 * 109.59196 * 66.17511 * 23 14 13 44 44 H 1.08998 * 109.58439 * 186.46680 * 23 14 13 45 45 H 1.09000 * 109.49969 * 58.66970 * 24 11 10 46 46 H 1.08997 * 109.49982 * 298.56500 * 24 11 10 47 47 H 1.09003 * 109.47563 * 90.00579 * 27 26 25 48 48 H 1.09001 * 109.46743 * 209.99700 * 27 26 25 49 49 H 1.08991 * 109.47515 * 329.99596 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1658 1.1457 0.0000 4 6 3.4862 1.1499 0.0050 5 6 4.2371 2.4565 0.0108 6 6 4.1846 -0.0573 -0.0007 7 6 5.6664 -0.0586 -0.0006 8 8 6.3415 -1.2215 0.1434 9 7 6.3168 1.0572 -0.1389 10 6 7.7819 1.0559 -0.1382 11 6 8.2928 1.4995 -1.5105 12 6 7.8844 2.9533 -1.7610 13 6 8.3707 3.3839 -3.1483 14 7 9.8156 3.1350 -3.2444 15 6 10.6730 4.1365 -3.6144 16 1 11.6391 4.2231 -3.1396 17 6 10.3005 5.0404 -4.5998 18 7 9.1964 4.8445 -5.2891 19 14 11.3659 6.5348 -4.9476 20 1 12.5435 6.5244 -4.0429 21 1 11.8262 6.4969 -6.3590 22 1 10.5753 7.7707 -4.7177 23 6 10.3229 1.7908 -2.9365 24 6 9.8179 1.3790 -1.5500 25 7 3.5167 -1.2071 -0.0007 26 6 2.1978 -1.2016 -0.0004 27 6 1.4405 -2.5045 -0.0009 28 1 -0.3634 -0.0003 1.0277 29 1 -0.3633 0.8903 -0.5136 30 1 -0.3633 -0.8897 -0.5142 31 1 4.5277 2.7131 -1.0080 32 1 3.5975 3.2413 0.4147 33 1 5.1291 2.3602 0.6297 34 1 5.7755 -2.0053 0.1615 35 1 8.1442 0.0507 0.0769 36 1 8.1454 1.7443 0.6247 37 1 7.8582 0.8644 -2.2825 38 1 8.3368 3.5921 -1.0025 39 1 6.7991 3.0423 -1.7122 40 1 8.1727 4.4461 -3.2917 41 1 7.8492 2.8085 -3.9133 42 1 8.9362 5.4759 -5.9779 43 1 9.9604 1.0836 -3.6823 44 1 11.4128 1.8015 -2.9423 45 1 10.1067 0.3473 -1.3494 46 1 10.2542 2.0328 -0.7949 47 1 1.2580 -2.8193 1.0266 48 1 0.4883 -2.3710 -0.5144 49 1 2.0271 -3.2656 -0.5154 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000330973616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:33:27 Heat of formation + Delta-G solvation = 34.140143 kcal Electronic energy + Delta-G solvation = -28679.436955 eV Core-core repulsion = 24835.326884 eV Total energy + Delta-G solvation = -3844.110071 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 332.195 amu Computer time = 1.39 seconds Orbital eigenvalues (eV) -41.69880 -39.02503 -37.56412 -35.55180 -34.81124 -34.49440 -32.77943 -30.80820 -30.25968 -29.70807 -29.21481 -27.15280 -25.97829 -24.24078 -23.35348 -22.35284 -22.02023 -21.18794 -20.39318 -18.96374 -18.53909 -18.14368 -16.64055 -16.05756 -15.73247 -15.43590 -14.84635 -14.67386 -14.40345 -13.96407 -13.82140 -13.65817 -13.51921 -13.38805 -13.37129 -13.04248 -13.00277 -12.77496 -12.59547 -12.47124 -12.35496 -12.15072 -12.12071 -11.81812 -11.53434 -11.23109 -11.12647 -10.86700 -10.71066 -10.54362 -10.13675 -10.04716 -9.94967 -9.65745 -9.64141 -9.46071 -9.24359 -9.05568 -8.68724 -8.40099 -6.39834 -5.70891 -3.25622 0.13974 0.71569 2.27299 3.06226 3.36963 3.40320 3.47608 3.50150 3.61396 3.74190 4.07750 4.20992 4.52141 4.54658 4.61683 4.91280 4.97025 5.03414 5.11505 5.17335 5.32913 5.40425 5.44120 5.46990 5.55597 5.57813 5.68390 5.76594 5.84898 5.91185 5.97116 6.03976 6.07508 6.26750 6.35141 6.46613 6.52576 6.66793 6.83358 6.87429 6.88819 6.98503 7.04329 7.13501 7.31761 7.44045 7.50580 7.76224 7.77108 7.88624 8.61548 9.32962 9.92232 10.56549 11.36618 Molecular weight = 332.20amu Principal moments of inertia in cm(-1) A = 0.019356 B = 0.002496 C = 0.002317 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1446.205114 B =11213.184859 C =12081.548053 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C 0.101 3.899 3 N -0.440 5.440 4 C 0.144 3.856 5 C -0.103 4.103 6 C 0.072 3.928 7 C 0.374 3.626 8 O -0.504 6.504 9 N -0.488 5.488 10 C 0.047 3.953 11 C -0.067 4.067 12 C -0.127 4.127 13 C 0.175 3.825 14 N -0.591 5.591 15 C -0.255 4.255 16 H 0.060 0.940 17 C 0.010 3.990 18 N -0.900 5.900 19 Si 0.901 3.099 20 H -0.277 1.277 21 H -0.290 1.290 22 H -0.289 1.289 23 C 0.147 3.853 24 C -0.126 4.126 25 N -0.429 5.429 26 C 0.071 3.929 27 C -0.101 4.101 28 H 0.086 0.914 29 H 0.083 0.917 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.066 0.934 33 H 0.114 0.886 34 H 0.405 0.595 35 H 0.053 0.947 36 H 0.083 0.917 37 H 0.058 0.942 38 H 0.051 0.949 39 H 0.056 0.944 40 H 0.074 0.926 41 H 0.015 0.985 42 H 0.253 0.747 43 H 0.014 0.986 44 H 0.052 0.948 45 H 0.047 0.953 46 H 0.058 0.942 47 H 0.083 0.917 48 H 0.084 0.916 49 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.029 -14.585 13.865 27.019 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.164 4.164 2 C -0.042 4.042 3 N -0.156 5.156 4 C 0.003 3.997 5 C -0.160 4.160 6 C -0.067 4.067 7 C 0.147 3.853 8 O -0.299 6.299 9 N -0.224 5.224 10 C -0.082 4.082 11 C -0.086 4.086 12 C -0.167 4.167 13 C 0.050 3.950 14 N -0.315 5.315 15 C -0.386 4.386 16 H 0.077 0.923 17 C -0.190 4.190 18 N -0.544 5.544 19 Si 0.731 3.269 20 H -0.202 1.202 21 H -0.216 1.216 22 H -0.216 1.216 23 C 0.021 3.979 24 C -0.166 4.166 25 N -0.145 5.145 26 C -0.072 4.072 27 C -0.159 4.159 28 H 0.104 0.896 29 H 0.102 0.898 30 H 0.103 0.897 31 H 0.112 0.888 32 H 0.085 0.915 33 H 0.132 0.868 34 H 0.259 0.741 35 H 0.072 0.928 36 H 0.101 0.899 37 H 0.076 0.924 38 H 0.070 0.930 39 H 0.074 0.926 40 H 0.092 0.908 41 H 0.033 0.967 42 H 0.063 0.937 43 H 0.032 0.968 44 H 0.071 0.929 45 H 0.065 0.935 46 H 0.077 0.923 47 H 0.101 0.899 48 H 0.103 0.897 49 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -17.537 -13.339 13.633 25.910 hybrid contribution 0.475 -0.459 -0.239 0.702 sum -17.062 -13.799 13.394 25.708 Atomic orbital electron populations 1.20834 0.87463 1.04345 1.03730 1.22353 0.98605 0.88881 0.94314 1.68346 1.08046 1.28682 1.10506 1.22447 0.89447 0.96960 0.90858 1.21186 0.99701 0.89785 1.05330 1.20421 0.92776 0.90352 1.03182 1.21427 0.87485 0.83401 0.92947 1.84901 1.39281 1.17059 1.88673 1.73054 1.11669 1.19328 1.18352 1.22225 0.85406 1.00963 0.99579 1.21016 0.95574 0.98278 0.93745 1.22156 0.99469 0.94069 1.00965 1.20681 0.83717 1.00384 0.90249 1.43942 1.02893 1.05240 1.79380 1.19129 0.99217 1.06064 1.14152 0.92286 1.25368 0.97617 1.00361 0.95611 1.69996 1.24377 1.36357 1.23645 0.86250 0.80112 0.82821 0.77753 1.20172 1.21641 1.21564 1.20891 0.96996 0.88029 0.92025 1.22037 0.94686 0.99294 1.00581 1.67792 1.09107 1.28588 1.09045 1.21926 0.89474 0.96995 0.98790 1.20764 0.99382 0.92144 1.03585 0.89589 0.89799 0.89683 0.88753 0.91470 0.86768 0.74053 0.92814 0.89879 0.92387 0.93031 0.92576 0.90799 0.96733 0.93727 0.96835 0.92935 0.93468 0.92338 0.89890 0.89728 0.90063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.58 9.78 36.00 0.35 -0.23 16 2 C 0.10 0.97 6.79 -82.32 -0.56 0.41 16 3 N -0.44 -5.37 10.34 -5.26 -0.05 -5.42 16 4 C 0.14 1.85 6.82 -82.04 -0.56 1.29 16 5 C -0.10 -1.28 8.72 36.00 0.31 -0.96 16 6 C 0.07 0.92 6.75 -82.83 -0.56 0.36 16 7 C 0.37 5.06 7.89 -14.29 -0.11 4.95 16 8 O -0.50 -6.25 12.00 -17.42 -0.21 -6.45 16 9 N -0.49 -7.19 5.94 -59.18 -0.35 -7.54 16 10 C 0.05 0.72 5.72 -4.04 -0.02 0.70 16 11 C -0.07 -1.21 2.35 -90.56 -0.21 -1.43 16 12 C -0.13 -2.56 5.27 -26.60 -0.14 -2.70 16 13 C 0.18 4.37 5.21 -3.71 -0.02 4.35 16 14 N -0.59 -15.50 2.94 -172.31 -0.51 -16.00 16 15 C -0.26 -7.25 9.49 -15.06 -0.14 -7.39 16 16 H 0.06 1.66 7.84 -52.49 -0.41 1.24 16 17 C 0.01 0.28 5.07 -17.43 -0.09 0.20 16 18 N -0.90 -26.96 11.47 55.49 0.64 -26.32 16 19 Si 0.90 22.15 29.56 -169.99 -5.03 17.13 16 20 H -0.28 -6.64 7.11 56.52 0.40 -6.23 16 21 H -0.29 -7.15 7.11 56.52 0.40 -6.75 16 22 H -0.29 -7.10 7.11 56.52 0.40 -6.70 16 23 C 0.15 3.28 6.52 -3.70 -0.02 3.25 16 24 C -0.13 -2.33 5.36 -26.61 -0.14 -2.47 16 25 N -0.43 -4.76 9.44 -5.89 -0.06 -4.82 16 26 C 0.07 0.66 6.79 -82.43 -0.56 0.10 16 27 C -0.10 -0.51 9.78 36.01 0.35 -0.16 16 28 H 0.09 0.36 8.14 -51.93 -0.42 -0.06 16 29 H 0.08 0.49 8.14 -51.92 -0.42 0.07 16 30 H 0.08 0.27 5.94 -51.93 -0.31 -0.04 16 31 H 0.09 1.27 8.14 -51.93 -0.42 0.85 16 32 H 0.07 0.76 8.14 -51.93 -0.42 0.33 16 33 H 0.11 1.47 5.74 -51.93 -0.30 1.17 16 34 H 0.40 3.66 8.05 45.56 0.37 4.03 16 35 H 0.05 0.82 6.73 -51.93 -0.35 0.47 16 36 H 0.08 1.25 8.14 -51.93 -0.42 0.82 16 37 H 0.06 1.14 8.14 -51.93 -0.42 0.71 16 38 H 0.05 1.05 8.14 -51.93 -0.42 0.63 16 39 H 0.06 1.06 7.72 -51.93 -0.40 0.66 16 40 H 0.07 2.04 6.60 -51.93 -0.34 1.70 16 41 H 0.01 0.39 8.14 -51.93 -0.42 -0.03 16 42 H 0.25 7.28 8.31 -40.82 -0.34 6.94 16 43 H 0.01 0.31 8.14 -51.93 -0.42 -0.11 16 44 H 0.05 1.14 7.93 -51.93 -0.41 0.73 16 45 H 0.05 0.77 8.14 -51.93 -0.42 0.34 16 46 H 0.06 1.09 8.14 -51.93 -0.42 0.66 16 47 H 0.08 0.31 8.14 -51.93 -0.42 -0.11 16 48 H 0.08 0.25 5.94 -51.93 -0.31 -0.06 16 49 H 0.08 0.41 8.14 -51.93 -0.42 -0.01 16 LS Contribution 387.98 15.07 5.85 5.85 Total: -1.00 -33.13 387.98 -8.94 -42.07 By element: Atomic # 1 Polarization: 8.35 SS G_CDS: -7.10 Total: 1.25 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -2.12 Total: 0.27 kcal Atomic # 7 Polarization: -59.78 SS G_CDS: -0.33 Total: -60.11 kcal Atomic # 8 Polarization: -6.25 SS G_CDS: -0.21 Total: -6.45 kcal Atomic # 14 Polarization: 22.15 SS G_CDS: -5.03 Total: 17.13 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -33.13 -8.94 -42.07 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000330973616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.205 kcal (2) G-P(sol) polarization free energy of solvation -33.125 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.080 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.940 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.065 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds