Wall clock time and date at job start Tue Mar 31 2020 18:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.35365 * 127.24993 * 2 1 4 4 N 1.35033 * 107.22787 * 180.09303 * 3 2 1 5 5 C 1.46507 * 124.87945 * 179.89400 * 4 3 2 6 6 N 1.28457 * 110.23214 * 359.63361 * 4 3 2 7 7 C 1.31807 * 110.07595 * 0.22756 * 6 4 3 8 8 C 1.47714 * 126.52204 * 180.02562 * 7 6 4 9 9 O 1.21571 * 120.00219 * 186.06775 * 8 7 6 10 10 N 1.34774 * 119.99464 * 6.06403 * 8 7 6 11 11 C 1.47069 * 120.84941 * 6.15483 * 10 8 7 12 12 C 1.53591 * 108.79262 * 126.52786 * 11 10 8 13 13 C 1.53141 * 109.54481 * 54.24267 * 12 11 10 14 14 C 1.52817 * 109.26177 * 299.01200 * 13 12 11 15 15 H 1.09000 * 109.47010 * 302.00585 * 14 13 12 16 16 C 1.53029 * 110.51814 * 181.59239 * 14 13 12 17 17 N 1.47069 * 108.50925 * 184.77118 * 16 14 13 18 18 C 1.36939 * 120.47546 * 233.21931 * 17 16 14 19 19 H 1.07999 * 119.99892 * 151.14937 * 18 17 16 20 20 C 1.38803 * 119.99852 * 331.14968 * 18 17 16 21 21 N 1.31618 * 120.00464 * 342.25870 * 20 18 17 22 22 Si 1.86800 * 119.99945 * 162.26423 * 20 18 17 23 23 H 1.48497 * 109.47253 * 59.99701 * 22 20 18 24 24 H 1.48495 * 109.47116 * 180.02562 * 22 20 18 25 25 H 1.48503 * 109.47104 * 299.99557 * 22 20 18 26 26 C 1.46869 * 119.05227 * 53.19311 * 17 16 14 27 27 C 1.53312 * 109.09953 * 307.34818 * 26 17 16 28 28 C 1.46724 * 120.84163 * 186.43880 * 10 8 7 29 29 H 1.08998 * 109.53476 * 114.79364 * 28 10 8 30 30 H 1.09001 * 109.47362 * 270.30683 * 1 2 3 31 31 H 1.09002 * 109.46985 * 30.31026 * 1 2 3 32 32 H 1.08998 * 109.46995 * 150.30763 * 1 2 3 33 33 H 1.08003 * 126.37929 * 359.96966 * 3 2 1 34 34 H 1.08997 * 109.47296 * 269.72318 * 5 4 3 35 35 H 1.09002 * 109.46634 * 149.72504 * 5 4 3 36 36 H 1.09001 * 109.46999 * 29.72411 * 5 4 3 37 37 H 1.08999 * 109.54228 * 246.44414 * 11 10 8 38 38 H 1.08997 * 109.53785 * 6.70430 * 11 10 8 39 39 H 1.09002 * 109.59584 * 294.14752 * 12 11 10 40 40 H 1.09011 * 109.37283 * 174.19731 * 12 11 10 41 41 H 1.09007 * 109.50477 * 179.07466 * 13 12 11 42 42 H 1.08992 * 109.50654 * 58.95312 * 13 12 11 43 43 H 1.09004 * 109.71522 * 64.94651 * 16 14 13 44 44 H 1.09004 * 109.53802 * 304.49708 * 16 14 13 45 45 H 0.97001 * 120.00783 * 180.02562 * 21 20 18 46 46 H 1.08992 * 109.53317 * 187.46014 * 26 17 16 47 47 H 1.08997 * 109.53011 * 67.23120 * 26 17 16 48 48 H 1.08998 * 109.56099 * 294.25951 * 27 26 17 49 49 H 1.09003 * 109.64574 * 173.99733 * 27 26 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3264 1.0775 0.0000 4 7 3.5951 0.6152 -0.0021 5 6 4.7938 1.4576 -0.0050 6 7 3.5998 -0.6694 0.0043 7 6 2.3635 -1.1264 0.0060 8 6 1.9505 -2.5446 0.0135 9 8 0.7755 -2.8361 -0.0970 10 7 2.8765 -3.5153 0.1426 11 6 4.2839 -3.1840 0.4117 12 6 4.7467 -3.9613 1.6529 13 6 4.4747 -5.4550 1.4529 14 6 2.9736 -5.6738 1.2683 15 1 2.4407 -5.2890 2.1378 16 6 2.6648 -7.1637 1.1051 17 7 1.2306 -7.3144 0.8166 18 6 0.4541 -8.1511 1.5731 19 1 -0.5981 -7.9435 1.7003 20 6 1.0195 -9.2660 2.1766 21 7 2.1821 -9.7212 1.7602 22 14 0.1302 -10.1204 3.5796 23 1 -1.1934 -10.6005 3.1074 24 1 0.9381 -11.2752 4.0474 25 1 -0.0608 -9.1644 4.6998 26 6 0.6427 -6.5543 -0.2941 27 6 0.9912 -5.0707 -0.1265 28 6 2.5072 -4.9293 0.0123 29 1 2.9947 -5.3540 -0.8652 30 1 -0.3634 0.0055 1.0276 31 1 -0.3633 0.8872 -0.5187 32 1 -0.3633 -0.8927 -0.5090 33 1 2.0220 2.1137 -0.0005 34 1 5.0919 1.6617 -1.0334 35 1 5.6023 0.9407 0.5119 36 1 4.5788 2.3970 0.5042 37 1 4.8949 -3.4643 -0.4464 38 1 4.3780 -2.1135 0.5938 39 1 4.2034 -3.6077 2.5293 40 1 5.8151 -3.8036 1.8009 41 1 4.8183 -6.0078 2.3273 42 1 5.0053 -5.8062 0.5680 43 1 2.9119 -7.6935 2.0251 44 1 3.2500 -7.5690 0.2796 45 1 2.5771 -10.5005 2.1816 46 1 -0.4402 -6.6773 -0.2871 47 1 1.0460 -6.9189 -1.2389 48 1 0.5049 -4.6803 0.7674 49 1 0.6513 -4.5136 -0.9996 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001021588835.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:00:36 Heat of formation + Delta-G solvation = 89.959643 kcal Electronic energy + Delta-G solvation = -30251.639243 eV Core-core repulsion = 26409.949687 eV Total energy + Delta-G solvation = -3841.689556 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 332.195 amu Computer time = 1.48 seconds Orbital eigenvalues (eV) -42.82167 -40.09310 -37.49938 -35.69953 -34.09585 -32.92456 -32.56513 -31.75048 -30.10470 -29.18217 -28.28417 -26.77046 -25.39152 -24.70899 -22.68196 -22.34085 -21.94152 -20.78984 -19.96530 -19.26494 -18.87637 -17.04191 -16.62120 -16.50809 -16.20501 -15.52172 -14.93228 -14.66788 -14.25080 -14.06229 -13.80418 -13.75304 -13.52018 -13.44556 -13.29090 -12.97710 -12.85695 -12.61059 -12.55600 -12.28369 -12.12857 -12.09267 -11.89552 -11.41422 -11.14935 -10.92144 -10.77221 -10.68630 -10.53023 -10.27562 -10.16098 -9.94129 -9.78748 -9.65439 -9.36672 -9.25227 -8.88265 -8.76743 -8.34417 -8.05498 -6.52334 -5.69410 -3.10740 1.54681 2.02409 2.25793 3.30492 3.45550 3.50119 3.52827 3.59502 4.13493 4.55227 4.58570 4.65505 4.68163 4.94292 5.02111 5.17254 5.18590 5.26408 5.36362 5.46125 5.48665 5.54899 5.66436 5.68869 5.78118 5.87375 5.88849 5.97827 6.05731 6.12770 6.16030 6.30722 6.39473 6.43798 6.52459 6.55175 6.57299 6.67151 6.71229 6.79183 6.91224 7.05860 7.16882 7.33754 7.44608 7.71270 7.72382 7.87048 7.90468 8.53010 8.56721 9.31623 9.95696 10.53017 11.39031 Molecular weight = 332.20amu Principal moments of inertia in cm(-1) A = 0.020287 B = 0.003284 C = 0.003010 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1379.875512 B = 8522.951660 C = 9300.057143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 C -0.145 4.145 3 C -0.025 4.025 4 N -0.292 5.292 5 C 0.088 3.912 6 N -0.263 5.263 7 C -0.006 4.006 8 C 0.596 3.404 9 O -0.520 6.520 10 N -0.593 5.593 11 C 0.088 3.912 12 C -0.131 4.131 13 C -0.112 4.112 14 C -0.120 4.120 15 H 0.066 0.934 16 C 0.184 3.816 17 N -0.593 5.593 18 C -0.249 4.249 19 H 0.064 0.936 20 C 0.002 3.998 21 N -0.904 5.904 22 Si 0.900 3.100 23 H -0.283 1.283 24 H -0.291 1.291 25 H -0.284 1.284 26 C 0.139 3.861 27 C -0.116 4.116 28 C 0.158 3.842 29 H 0.064 0.936 30 H 0.066 0.934 31 H 0.059 0.941 32 H 0.086 0.914 33 H 0.179 0.821 34 H 0.083 0.917 35 H 0.095 0.905 36 H 0.093 0.907 37 H 0.060 0.940 38 H 0.121 0.879 39 H 0.060 0.940 40 H 0.066 0.934 41 H 0.063 0.937 42 H 0.059 0.941 43 H 0.086 0.914 44 H 0.018 0.982 45 H 0.253 0.747 46 H 0.055 0.945 47 H 0.013 0.987 48 H 0.071 0.929 49 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.557 24.741 -3.746 26.139 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.155 4.155 3 C -0.168 4.168 4 N -0.079 5.079 5 C -0.053 4.053 6 N -0.099 5.099 7 C -0.166 4.166 8 C 0.382 3.618 9 O -0.395 6.395 10 N -0.325 5.325 11 C -0.036 4.036 12 C -0.169 4.169 13 C -0.150 4.150 14 C -0.141 4.141 15 H 0.084 0.916 16 C 0.058 3.942 17 N -0.315 5.315 18 C -0.379 4.379 19 H 0.082 0.918 20 C -0.196 4.196 21 N -0.549 5.549 22 Si 0.730 3.270 23 H -0.209 1.209 24 H -0.217 1.217 25 H -0.211 1.211 26 C 0.013 3.987 27 C -0.155 4.155 28 C 0.056 3.944 29 H 0.082 0.918 30 H 0.084 0.916 31 H 0.078 0.922 32 H 0.105 0.895 33 H 0.196 0.804 34 H 0.102 0.898 35 H 0.114 0.886 36 H 0.112 0.888 37 H 0.078 0.922 38 H 0.138 0.862 39 H 0.079 0.921 40 H 0.085 0.915 41 H 0.082 0.918 42 H 0.078 0.922 43 H 0.104 0.896 44 H 0.036 0.964 45 H 0.063 0.937 46 H 0.074 0.926 47 H 0.031 0.969 48 H 0.090 0.910 49 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 8.228 24.161 -3.766 25.800 hybrid contribution -0.782 -0.096 0.781 1.109 sum 7.447 24.065 -2.984 25.367 Atomic orbital electron populations 1.20195 0.88055 1.03180 1.02361 1.20397 0.97534 0.90446 1.07165 1.22581 0.83774 1.00392 1.10034 1.45447 1.06931 1.04072 1.51431 1.22139 0.84974 0.93821 1.04318 1.73373 1.22974 0.93127 1.20398 1.22204 0.89169 0.95571 1.09632 1.17040 0.85342 0.82183 0.77250 1.90831 1.17112 1.81199 1.50389 1.48133 1.08511 1.06635 1.69212 1.22493 0.81004 1.02927 0.97177 1.21983 1.00416 0.96553 0.97938 1.21489 0.97028 0.94707 1.01793 1.22236 0.94213 1.00545 0.97083 0.91567 1.20704 0.84337 0.88310 1.00867 1.44083 1.05594 1.49095 1.32760 1.19162 0.93233 1.01743 1.23725 0.91827 1.25024 0.97721 0.96109 1.00792 1.70031 1.18962 1.24514 1.41343 0.86403 0.78984 0.78719 0.82894 1.20905 1.21726 1.21107 1.21129 0.97260 0.89938 0.90422 1.22459 0.92538 0.97323 1.03170 1.21343 0.97444 0.77687 0.97889 0.91767 0.91557 0.92231 0.89504 0.80429 0.89835 0.88602 0.88809 0.92178 0.86195 0.92105 0.91542 0.91784 0.92196 0.89588 0.96368 0.93721 0.92646 0.96910 0.91047 0.91033 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.91 9.99 36.01 0.36 -0.55 16 2 C -0.15 -1.82 6.25 -104.40 -0.65 -2.47 16 3 C -0.03 -0.23 11.40 -17.17 -0.20 -0.43 16 4 N -0.29 -2.72 3.70 -68.12 -0.25 -2.98 16 5 C 0.09 0.36 11.31 59.85 0.68 1.04 16 6 N -0.26 -3.33 8.44 33.42 0.28 -3.05 16 7 C -0.01 -0.09 6.85 -82.76 -0.57 -0.65 16 8 C 0.60 10.46 7.63 -12.39 -0.09 10.37 16 9 O -0.52 -10.17 10.63 5.30 0.06 -10.12 16 10 N -0.59 -10.12 2.96 -166.19 -0.49 -10.61 16 11 C 0.09 1.24 6.16 -3.42 -0.02 1.22 16 12 C -0.13 -1.81 6.08 -26.35 -0.16 -1.97 16 13 C -0.11 -1.84 5.25 -26.75 -0.14 -1.98 16 14 C -0.12 -2.41 2.21 -90.56 -0.20 -2.61 16 15 H 0.07 1.47 8.14 -51.93 -0.42 1.04 16 16 C 0.18 4.51 4.63 -3.72 -0.02 4.49 16 17 N -0.59 -15.65 3.00 -172.28 -0.52 -16.17 16 18 C -0.25 -7.13 9.55 -15.06 -0.14 -7.28 16 19 H 0.06 1.81 7.89 -52.49 -0.41 1.39 16 20 C 0.00 0.05 4.88 -17.43 -0.09 -0.03 16 21 N -0.90 -26.77 11.30 55.49 0.63 -26.15 16 22 Si 0.90 22.37 29.59 -169.99 -5.03 17.34 16 23 H -0.28 -6.95 7.11 56.52 0.40 -6.55 16 24 H -0.29 -7.24 7.11 56.52 0.40 -6.83 16 25 H -0.28 -7.03 7.11 56.52 0.40 -6.63 16 26 C 0.14 3.22 6.50 -3.68 -0.02 3.19 16 27 C -0.12 -2.41 3.80 -26.63 -0.10 -2.51 16 28 C 0.16 3.03 2.63 -67.72 -0.18 2.86 16 29 H 0.06 1.24 8.14 -51.93 -0.42 0.82 16 30 H 0.07 0.73 8.14 -51.93 -0.42 0.31 16 31 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 32 H 0.09 1.19 6.62 -51.93 -0.34 0.85 16 33 H 0.18 0.92 8.06 -52.48 -0.42 0.50 16 34 H 0.08 0.24 8.14 -51.93 -0.42 -0.18 16 35 H 0.10 0.35 8.14 -51.93 -0.42 -0.07 16 36 H 0.09 0.14 8.13 -51.93 -0.42 -0.28 16 37 H 0.06 0.81 8.14 -51.93 -0.42 0.38 16 38 H 0.12 1.61 4.14 -72.88 -0.30 1.31 16 39 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 40 H 0.07 0.76 8.14 -51.92 -0.42 0.34 16 41 H 0.06 1.05 8.14 -51.93 -0.42 0.63 16 42 H 0.06 0.96 8.14 -51.93 -0.42 0.53 16 43 H 0.09 2.34 6.16 -51.93 -0.32 2.02 16 44 H 0.02 0.47 8.14 -51.93 -0.42 0.04 16 45 H 0.25 7.25 8.31 -40.82 -0.34 6.91 16 46 H 0.05 1.27 7.93 -51.93 -0.41 0.86 16 47 H 0.01 0.30 8.14 -51.93 -0.42 -0.12 16 48 H 0.07 1.63 7.10 -51.93 -0.37 1.26 16 49 H 0.07 1.46 6.50 -51.93 -0.34 1.13 16 LS Contribution 372.73 15.07 5.62 5.62 Total: -1.00 -34.00 372.73 -9.22 -43.23 By element: Atomic # 1 Polarization: 8.19 SS G_CDS: -7.97 Total: 0.22 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: -1.54 Total: 2.67 kcal Atomic # 7 Polarization: -58.61 SS G_CDS: -0.35 Total: -58.96 kcal Atomic # 8 Polarization: -10.17 SS G_CDS: 0.06 Total: -10.12 kcal Atomic # 14 Polarization: 22.37 SS G_CDS: -5.03 Total: 17.34 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -34.00 -9.22 -43.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001021588835.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.186 kcal (2) G-P(sol) polarization free energy of solvation -34.002 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.184 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.226 kcal (6) G-S(sol) free energy of system = (1) + (5) 89.960 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.48 seconds