Wall clock time and date at job start Tue Mar 31 2020 18:01:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.35368 * 127.24799 * 2 1 4 4 N 1.35036 * 107.22964 * 180.26112 * 3 2 1 5 5 C 1.46499 * 124.88284 * 179.72267 * 4 3 2 6 6 N 1.28465 * 110.22937 * 359.72674 * 4 3 2 7 7 C 1.31814 * 110.07701 * 359.97438 * 6 4 3 8 8 C 1.47706 * 126.52223 * 180.02562 * 7 6 4 9 9 O 1.21571 * 119.99862 * 180.02562 * 8 7 6 10 10 N 1.34774 * 119.99728 * 0.02562 * 8 7 6 11 11 C 1.46506 * 120.00072 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.47289 * 180.02562 * 11 10 8 13 13 C 1.53360 * 111.22614 * 297.63005 * 12 11 10 14 14 C 1.55546 * 105.83614 * 241.97155 * 13 12 11 15 15 C 1.54685 * 104.35050 * 334.36047 * 14 13 12 16 16 C 1.54570 * 111.31738 * 177.45559 * 12 11 10 17 17 H 1.08998 * 111.92492 * 18.70816 * 16 12 11 18 18 N 1.46897 * 107.36400 * 255.61831 * 16 12 11 19 19 C 1.36940 * 125.24661 * 181.65760 * 18 16 12 20 20 H 1.07996 * 120.00214 * 359.97438 * 19 18 16 21 21 C 1.38811 * 119.99747 * 179.97438 * 19 18 16 22 22 N 1.31613 * 120.00071 * 359.97438 * 21 19 18 23 23 Si 1.86801 * 119.99915 * 179.97438 * 21 19 18 24 24 H 1.48493 * 109.47120 * 359.97438 * 23 21 19 25 25 H 1.48505 * 109.47225 * 120.00269 * 23 21 19 26 26 H 1.48500 * 109.47250 * 240.00072 * 23 21 19 27 27 C 1.46727 * 109.50120 * 1.65755 * 18 16 12 28 28 C 1.53864 * 111.25953 * 61.01309 * 12 11 10 29 29 H 1.09002 * 109.46625 * 270.18509 * 1 2 3 30 30 H 1.08996 * 109.47436 * 30.18890 * 1 2 3 31 31 H 1.08997 * 109.47096 * 150.19333 * 1 2 3 32 32 H 1.07999 * 126.38651 * 359.97438 * 3 2 1 33 33 H 1.08996 * 109.46951 * 270.02260 * 5 4 3 34 34 H 1.08999 * 109.47384 * 30.02752 * 5 4 3 35 35 H 1.08998 * 109.46458 * 150.02370 * 5 4 3 36 36 H 0.97001 * 120.00676 * 359.97438 * 10 8 7 37 37 H 1.09001 * 109.47060 * 300.00359 * 11 10 8 38 38 H 1.09004 * 109.47073 * 59.99848 * 11 10 8 39 39 H 1.09002 * 110.05483 * 1.97462 * 13 12 11 40 40 H 1.08994 * 110.05892 * 123.47642 * 13 12 11 41 41 H 1.08997 * 110.54007 * 215.54668 * 14 13 12 42 42 H 1.09003 * 110.23079 * 93.01640 * 14 13 12 43 43 H 1.08998 * 110.60929 * 278.64781 * 15 14 13 44 44 H 1.08998 * 110.74774 * 155.72876 * 15 14 13 45 45 H 0.97007 * 120.00073 * 179.97438 * 22 21 19 46 46 H 1.09002 * 110.04574 * 221.96979 * 27 18 16 47 47 H 1.08997 * 110.08851 * 100.53237 * 27 18 16 48 48 H 1.09003 * 110.57191 * 212.51356 * 28 12 11 49 49 H 1.08997 * 110.57297 * 335.38872 * 28 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.0776 0.0000 4 7 3.5951 0.6153 -0.0059 5 6 4.7936 1.4577 -0.0137 6 7 3.5998 -0.6693 -0.0037 7 6 2.3635 -1.1264 0.0042 8 6 1.9506 -2.5445 0.0095 9 8 0.7698 -2.8338 0.0162 10 7 2.8829 -3.5178 0.0069 11 6 2.4734 -4.9245 0.0116 12 6 3.7158 -5.8173 0.0081 13 6 4.5481 -5.6056 -1.2626 14 6 4.5572 -6.9766 -1.9973 15 6 4.3357 -8.0156 -0.8730 16 6 3.3329 -7.3133 0.0768 17 1 2.2949 -7.4813 -0.2100 18 7 3.6027 -7.7724 1.4458 19 6 3.4235 -9.0518 1.9000 20 1 3.0558 -9.8158 1.2311 21 6 3.7147 -9.3667 3.2202 22 7 4.1633 -8.4358 4.0353 23 14 3.4697 -11.1118 3.8400 24 1 2.9591 -11.9624 2.7351 25 1 4.7659 -11.6522 4.3230 26 1 2.4887 -11.1081 4.9549 27 6 4.0936 -6.6487 2.2515 28 6 4.5799 -5.5760 1.2581 29 1 -0.3632 0.0033 1.0277 30 1 -0.3634 0.8882 -0.5167 31 1 -0.3633 -0.8917 -0.5108 32 1 2.0220 2.1138 -0.0004 33 1 5.0852 1.6651 -1.0433 34 1 4.5821 2.3955 0.5000 35 1 5.6054 0.9391 0.4964 36 1 3.8250 -3.2870 0.0012 37 1 1.8827 -5.1279 0.9048 38 1 1.8742 -5.1314 -0.8751 39 1 4.0935 -4.8331 -1.8828 40 1 5.5671 -5.3226 -0.9991 41 1 5.5171 -7.1420 -2.4864 42 1 3.7451 -7.0206 -2.7232 43 1 5.2716 -8.2261 -0.3554 44 1 3.9058 -8.9332 -1.2745 45 1 4.3664 -8.6558 4.9580 46 1 4.9199 -6.9748 2.8833 47 1 3.2878 -6.2495 2.8675 48 1 5.6357 -5.7183 1.0273 49 1 4.4053 -4.5769 1.6573 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001094415381.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:01:37 Heat of formation + Delta-G solvation = 63.449029 kcal Electronic energy + Delta-G solvation = -29310.607808 eV Core-core repulsion = 25467.768666 eV Total energy + Delta-G solvation = -3842.839143 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 332.195 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.80490 -39.85071 -38.61329 -34.71364 -34.06767 -33.89256 -32.15622 -31.56088 -30.26091 -28.58353 -27.80831 -26.67274 -26.51825 -24.37490 -23.78097 -22.46370 -20.86504 -20.32081 -19.99081 -19.60277 -18.32999 -17.60056 -16.82450 -16.52758 -16.40429 -15.40472 -15.07956 -14.84627 -14.72691 -14.13911 -13.96472 -13.75188 -13.55766 -13.44966 -13.19104 -13.02663 -12.81968 -12.77341 -12.60869 -12.42513 -12.16821 -11.76858 -11.43154 -11.21415 -11.07011 -10.91127 -10.77583 -10.69198 -10.59086 -10.19280 -10.08555 -10.01456 -9.77950 -9.72443 -9.53475 -9.40578 -9.38796 -8.92338 -8.69407 -8.54319 -6.75442 -5.60273 -2.98983 1.52584 1.97334 2.25361 3.37035 3.43660 3.49525 3.51670 3.52459 4.13539 4.54042 4.54834 4.67806 4.73081 4.96076 4.97965 5.06754 5.10644 5.11894 5.20670 5.41853 5.56586 5.61673 5.64381 5.72871 5.82970 5.87901 5.92265 5.95947 6.07620 6.11093 6.15567 6.16290 6.25836 6.38200 6.38991 6.47218 6.51591 6.55728 6.58926 6.72539 6.77946 6.84519 6.93178 7.18449 7.58326 7.63101 7.74629 7.86863 7.93319 8.39913 8.41474 9.30372 9.91594 10.55314 11.45290 Molecular weight = 332.20amu Principal moments of inertia in cm(-1) A = 0.016695 B = 0.002839 C = 0.002743 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1676.780525 B = 9859.710556 C =10206.127873 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 C -0.145 4.145 3 C -0.027 4.027 4 N -0.286 5.286 5 C 0.088 3.912 6 N -0.260 5.260 7 C -0.013 4.013 8 C 0.600 3.400 9 O -0.533 6.533 10 N -0.709 5.709 11 C 0.141 3.859 12 C -0.081 4.081 13 C -0.111 4.111 14 C -0.122 4.122 15 C -0.130 4.130 16 C 0.173 3.827 17 H 0.048 0.952 18 N -0.596 5.596 19 C -0.217 4.217 20 H 0.077 0.923 21 C -0.012 4.012 22 N -0.922 5.922 23 Si 0.911 3.089 24 H -0.280 1.280 25 H -0.292 1.292 26 H -0.292 1.292 27 C 0.163 3.837 28 C -0.133 4.133 29 H 0.067 0.933 30 H 0.059 0.941 31 H 0.083 0.917 32 H 0.180 0.820 33 H 0.084 0.916 34 H 0.094 0.906 35 H 0.097 0.903 36 H 0.405 0.595 37 H 0.074 0.926 38 H 0.066 0.934 39 H 0.059 0.941 40 H 0.063 0.937 41 H 0.055 0.945 42 H 0.057 0.943 43 H 0.071 0.929 44 H 0.054 0.946 45 H 0.250 0.750 46 H 0.092 0.908 47 H 0.012 0.988 48 H 0.060 0.940 49 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.432 21.474 -11.058 24.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.155 4.155 3 C -0.170 4.170 4 N -0.074 5.074 5 C -0.052 4.052 6 N -0.096 5.096 7 C -0.173 4.173 8 C 0.384 3.616 9 O -0.409 6.409 10 N -0.360 5.360 11 C 0.018 3.982 12 C -0.082 4.082 13 C -0.149 4.149 14 C -0.160 4.160 15 C -0.170 4.170 16 C 0.065 3.935 17 H 0.065 0.935 18 N -0.320 5.320 19 C -0.346 4.346 20 H 0.095 0.905 21 C -0.207 4.207 22 N -0.570 5.570 23 Si 0.742 3.258 24 H -0.206 1.206 25 H -0.219 1.219 26 H -0.219 1.219 27 C 0.038 3.962 28 C -0.172 4.172 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.102 0.898 32 H 0.197 0.803 33 H 0.102 0.898 34 H 0.113 0.887 35 H 0.116 0.884 36 H 0.240 0.760 37 H 0.093 0.907 38 H 0.085 0.915 39 H 0.078 0.922 40 H 0.082 0.918 41 H 0.074 0.926 42 H 0.076 0.924 43 H 0.090 0.910 44 H 0.072 0.928 45 H 0.060 0.940 46 H 0.110 0.890 47 H 0.030 0.970 48 H 0.079 0.921 49 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 1.832 20.853 -10.835 23.571 hybrid contribution -0.307 -0.314 0.453 0.631 sum 1.525 20.539 -10.382 23.064 Atomic orbital electron populations 1.20175 0.88074 1.02962 1.02441 1.20404 0.97521 0.90461 1.07153 1.22589 0.83712 1.00460 1.10207 1.45249 1.07038 1.03776 1.51306 1.22160 0.84931 0.93785 1.04369 1.73513 1.23309 0.93703 1.19112 1.21940 0.89388 0.95211 1.10769 1.16857 0.85526 0.82496 0.76730 1.90769 1.16866 1.82653 1.50569 1.45919 1.09901 1.06346 1.73817 1.21391 0.96428 0.78042 1.02376 1.21863 0.94362 0.96044 0.95948 1.22377 0.99436 0.97376 0.95679 1.22522 1.00422 0.95164 0.97887 1.22985 1.01097 0.97033 0.95863 1.21523 0.95761 0.89009 0.87212 0.93472 1.44346 1.76191 1.06447 1.04995 1.19084 1.36648 0.84728 0.94136 0.90491 1.24773 1.01920 0.97764 0.96254 1.69903 1.51121 1.30873 1.05147 0.86050 0.77229 0.83975 0.78579 1.20570 1.21905 1.21881 1.21426 0.98825 0.84688 0.91228 1.22795 0.98357 1.00044 0.95976 0.91427 0.92172 0.89817 0.80298 0.89771 0.88699 0.88436 0.75955 0.90749 0.91526 0.92218 0.91831 0.92578 0.92413 0.91013 0.92753 0.93957 0.89000 0.96976 0.92131 0.92491 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.85 9.92 36.00 0.36 -0.50 16 2 C -0.15 -1.77 6.25 -104.40 -0.65 -2.42 16 3 C -0.03 -0.25 11.40 -17.17 -0.20 -0.44 16 4 N -0.29 -2.70 3.70 -68.13 -0.25 -2.96 16 5 C 0.09 0.38 11.31 59.85 0.68 1.06 16 6 N -0.26 -3.33 11.67 33.42 0.39 -2.94 16 7 C -0.01 -0.18 7.13 -82.76 -0.59 -0.77 16 8 C 0.60 9.88 7.82 -12.39 -0.10 9.79 16 9 O -0.53 -10.11 15.12 5.30 0.08 -10.03 16 10 N -0.71 -10.92 4.64 -61.29 -0.28 -11.20 16 11 C 0.14 2.39 4.43 -4.04 -0.02 2.37 16 12 C -0.08 -1.40 0.53 -153.05 -0.08 -1.48 16 13 C -0.11 -1.61 5.75 -25.19 -0.14 -1.75 16 14 C -0.12 -1.79 6.88 -24.49 -0.17 -1.96 16 15 C -0.13 -2.39 6.23 -24.82 -0.15 -2.54 16 16 C 0.17 3.54 3.60 -65.86 -0.24 3.30 16 17 H 0.05 0.99 7.93 -51.93 -0.41 0.58 16 18 N -0.60 -14.97 2.99 -162.43 -0.49 -15.45 16 19 C -0.22 -6.01 9.96 -15.06 -0.15 -6.16 16 20 H 0.08 2.07 7.83 -52.49 -0.41 1.66 16 21 C -0.01 -0.33 5.48 -17.43 -0.10 -0.43 16 22 N -0.92 -27.13 10.14 55.49 0.56 -26.57 16 23 Si 0.91 22.36 29.55 -169.99 -5.02 17.34 16 24 H -0.28 -6.69 7.11 56.52 0.40 -6.29 16 25 H -0.29 -7.20 7.11 56.52 0.40 -6.80 16 26 H -0.29 -7.26 7.11 56.52 0.40 -6.86 16 27 C 0.16 3.99 5.65 -3.35 -0.02 3.97 16 28 C -0.13 -2.51 5.77 -25.72 -0.15 -2.66 16 29 H 0.07 0.72 8.14 -51.93 -0.42 0.29 16 30 H 0.06 0.48 8.14 -51.93 -0.42 0.06 16 31 H 0.08 1.08 6.73 -51.93 -0.35 0.73 16 32 H 0.18 0.89 8.06 -52.49 -0.42 0.47 16 33 H 0.08 0.25 8.14 -51.93 -0.42 -0.17 16 34 H 0.09 0.16 8.13 -51.93 -0.42 -0.26 16 35 H 0.10 0.41 8.14 -51.93 -0.42 -0.01 16 36 H 0.41 5.72 7.28 -40.82 -0.30 5.42 16 37 H 0.07 1.46 8.14 -51.93 -0.42 1.04 16 38 H 0.07 1.11 8.14 -51.93 -0.42 0.69 16 39 H 0.06 0.80 7.51 -51.93 -0.39 0.41 16 40 H 0.06 0.88 7.28 -51.93 -0.38 0.51 16 41 H 0.06 0.75 8.14 -51.93 -0.42 0.33 16 42 H 0.06 0.79 8.14 -51.93 -0.42 0.37 16 43 H 0.07 1.46 8.06 -51.93 -0.42 1.05 16 44 H 0.05 0.98 8.14 -51.93 -0.42 0.56 16 45 H 0.25 7.16 8.31 -40.82 -0.34 6.82 16 46 H 0.09 2.53 6.16 -51.93 -0.32 2.21 16 47 H 0.01 0.33 8.14 -51.93 -0.42 -0.09 16 48 H 0.06 1.10 7.42 -51.93 -0.39 0.72 16 49 H 0.06 1.00 7.03 -51.93 -0.36 0.64 16 LS Contribution 386.37 15.07 5.82 5.82 Total: -1.00 -33.71 386.37 -8.84 -42.55 By element: Atomic # 1 Polarization: 12.00 SS G_CDS: -7.93 Total: 4.07 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -1.72 Total: -0.63 kcal Atomic # 7 Polarization: -59.05 SS G_CDS: -0.07 Total: -59.12 kcal Atomic # 8 Polarization: -10.11 SS G_CDS: 0.08 Total: -10.03 kcal Atomic # 14 Polarization: 22.36 SS G_CDS: -5.02 Total: 17.34 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -33.71 -8.84 -42.55 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001094415381.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.997 kcal (2) G-P(sol) polarization free energy of solvation -33.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.289 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.840 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.548 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.449 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds