Wall clock time and date at job start Tue Mar 31 2020 16:59:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 N 1.31134 * 126.54839 * 2 1 4 4 C 1.34490 * 105.61260 * 180.02562 * 3 2 1 5 5 C 1.50707 * 126.28527 * 180.02562 * 4 3 2 6 6 H 1.09000 * 109.46973 * 344.97263 * 5 4 3 7 7 N 1.46491 * 109.47006 * 224.97442 * 5 4 3 8 8 C 1.34784 * 120.00073 * 154.99883 * 7 5 4 9 9 O 1.21279 * 119.99954 * 0.02562 * 8 7 5 10 10 C 1.50698 * 120.00003 * 179.97438 * 8 7 5 11 11 C 1.53004 * 109.47088 * 180.02562 * 10 8 7 12 12 C 1.50698 * 109.47088 * 180.02562 * 11 10 8 13 13 H 1.08004 * 120.00156 * 0.02562 * 12 11 10 14 14 C 1.37878 * 119.99762 * 179.97438 * 12 11 10 15 15 N 1.31515 * 120.00343 * 359.97438 * 14 12 11 16 16 Si 1.86805 * 119.99806 * 179.97438 * 14 12 11 17 17 H 1.48497 * 109.47024 * 0.02562 * 16 14 12 18 18 H 1.48502 * 109.46799 * 120.00006 * 16 14 12 19 19 H 1.48492 * 109.47075 * 240.00016 * 16 14 12 20 20 C 1.50699 * 109.47094 * 104.97160 * 5 4 3 21 21 C 1.38218 * 120.01202 * 100.00078 * 20 5 4 22 22 C 1.38219 * 120.02721 * 179.97438 * 21 20 5 23 23 C 1.38264 * 120.05010 * 0.02562 * 22 21 20 24 24 C 1.38179 * 120.02720 * 0.02562 * 23 22 21 25 25 C 1.38434 * 120.01154 * 279.72481 * 20 5 4 26 26 F 1.35096 * 120.03066 * 0.02562 * 25 20 5 27 27 N 1.29938 * 107.42847 * 359.97438 * 4 3 2 28 28 O 1.21303 * 110.25257 * 359.97438 * 27 4 3 29 29 H 1.09003 * 109.46787 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.46911 * 299.96581 * 1 2 3 31 31 H 1.09002 * 109.47647 * 59.96998 * 1 2 3 32 32 H 0.96999 * 119.99980 * 335.00009 * 7 5 4 33 33 H 1.09001 * 109.46999 * 300.00164 * 10 8 7 34 34 H 1.09003 * 109.47189 * 60.00165 * 10 8 7 35 35 H 1.09000 * 109.46610 * 300.00346 * 11 10 8 36 36 H 1.08997 * 109.46763 * 59.99677 * 11 10 8 37 37 H 0.96993 * 120.00238 * 180.02562 * 15 14 12 38 38 H 1.08007 * 119.98553 * 359.97438 * 21 20 5 39 39 H 1.07997 * 119.97418 * 180.02562 * 22 21 20 40 40 H 1.08000 * 119.98592 * 179.97438 * 23 22 21 41 41 H 1.07995 * 120.01356 * 179.97438 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.2879 1.0535 0.0000 4 6 3.5440 0.5729 -0.0006 5 6 4.8111 1.3888 -0.0003 6 1 4.5792 2.4202 -0.2660 7 7 5.7504 0.8324 -0.9770 8 6 6.6973 1.6193 -1.5255 9 8 6.7719 2.7880 -1.2101 10 6 7.6639 1.0467 -2.5299 11 6 8.6274 2.1418 -2.9921 12 6 9.5937 1.5693 -3.9970 13 1 9.5270 0.5287 -4.2782 14 6 10.5622 2.3744 -4.5581 15 7 10.6424 3.6420 -4.2169 16 14 11.7604 1.6646 -5.8032 17 1 11.4603 0.2257 -6.0143 18 1 11.6250 2.3921 -7.0907 19 1 13.1477 1.8121 -5.2947 20 6 5.4325 1.3512 1.3722 21 6 6.4890 0.4981 1.6296 22 6 7.0594 0.4637 2.8881 23 6 6.5737 1.2822 3.8910 24 6 5.5169 2.1352 3.6363 25 6 4.9490 2.1754 2.3739 26 9 3.9197 3.0134 2.1221 27 7 3.4646 -0.7240 -0.0003 28 8 2.3030 -1.0735 0.0008 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5133 0.8903 31 1 -0.3634 0.5143 -0.8897 32 1 5.6910 -0.1024 -1.2290 33 1 8.2292 0.2366 -2.0691 34 1 7.1117 0.6625 -3.3875 35 1 8.0623 2.9521 -3.4527 36 1 9.1795 2.5256 -2.1343 37 1 11.3235 4.2084 -4.6119 38 1 6.8689 -0.1421 0.8470 39 1 7.8852 -0.2030 3.0882 40 1 7.0200 1.2542 4.8741 41 1 5.1374 2.7741 4.4199 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000360367971.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 16:59:39 Heat of formation + Delta-G solvation = 9.469687 kcal Electronic energy + Delta-G solvation = -28065.283610 eV Core-core repulsion = 23863.091686 eV Total energy + Delta-G solvation = -4202.191924 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 333.128 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.94562 -45.88816 -40.00817 -38.66566 -36.56618 -35.17118 -33.48516 -33.33161 -31.67176 -30.74986 -30.64446 -29.22067 -27.57714 -25.48753 -24.08729 -22.89515 -22.68346 -21.96426 -20.67688 -19.85109 -18.48847 -17.88776 -17.77170 -16.89104 -16.73647 -16.28299 -15.90809 -15.58153 -15.50850 -14.88500 -14.83819 -14.40726 -14.33779 -14.02331 -13.86079 -13.66411 -13.40706 -13.24659 -13.05567 -12.44031 -12.37174 -12.25718 -12.18871 -12.07255 -11.64034 -11.31321 -11.22704 -11.18889 -10.95484 -10.59403 -10.22278 -9.99485 -9.71299 -9.29836 -9.23819 -9.07468 -9.05541 -8.79891 -8.33379 -5.96954 -4.01522 0.82956 0.96828 1.07622 1.89719 2.52467 2.96528 3.07877 3.32194 3.33010 3.39500 3.42742 3.63620 3.79273 4.14943 4.42090 4.46984 4.62840 4.65200 4.81368 4.83499 4.86979 5.10375 5.12528 5.15729 5.31415 5.38123 5.43038 5.57971 5.66139 5.73506 5.89858 5.93710 6.12571 6.16793 6.18200 6.24592 6.44754 6.72265 6.82988 7.66969 7.73569 7.83622 7.88026 8.05406 8.35948 8.62433 9.06750 9.62171 11.13964 Molecular weight = 333.13amu Principal moments of inertia in cm(-1) A = 0.012479 B = 0.003090 C = 0.002706 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2243.176028 B = 9058.232986 C =10344.015773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 C 0.177 3.823 3 N -0.466 5.466 4 C 0.173 3.827 5 C 0.284 3.716 6 H 0.128 0.872 7 N -0.736 5.736 8 C 0.514 3.486 9 O -0.520 6.520 10 C -0.127 4.127 11 C 0.037 3.963 12 C -0.527 4.527 13 H 0.057 0.943 14 C 0.058 3.942 15 N -0.889 5.889 16 Si 0.893 3.107 17 H -0.273 1.273 18 H -0.284 1.284 19 H -0.284 1.284 20 C -0.132 4.132 21 C -0.062 4.062 22 C -0.131 4.131 23 C -0.087 4.087 24 C -0.158 4.158 25 C 0.116 3.884 26 F -0.131 7.131 27 N -0.370 5.370 28 O 0.082 5.918 29 H 0.097 0.903 30 H 0.104 0.896 31 H 0.105 0.895 32 H 0.404 0.596 33 H 0.082 0.918 34 H 0.082 0.918 35 H 0.024 0.976 36 H 0.025 0.975 37 H 0.260 0.740 38 H 0.135 0.865 39 H 0.132 0.868 40 H 0.133 0.867 41 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.960 -10.648 15.685 27.528 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.044 4.044 3 N -0.200 5.200 4 C -0.101 4.101 5 C 0.177 3.823 6 H 0.145 0.855 7 N -0.392 5.392 8 C 0.303 3.697 9 O -0.393 6.393 10 C -0.167 4.167 11 C -0.001 4.001 12 C -0.565 4.565 13 H 0.075 0.925 14 C -0.144 4.144 15 N -0.527 5.527 16 Si 0.720 3.280 17 H -0.197 1.197 18 H -0.210 1.210 19 H -0.210 1.210 20 C -0.136 4.136 21 C -0.081 4.081 22 C -0.149 4.149 23 C -0.105 4.105 24 C -0.177 4.177 25 C 0.096 3.904 26 F -0.109 7.109 27 N -0.076 5.076 28 O 0.021 5.979 29 H 0.116 0.884 30 H 0.122 0.878 31 H 0.123 0.877 32 H 0.239 0.761 33 H 0.101 0.899 34 H 0.100 0.900 35 H 0.043 0.957 36 H 0.043 0.957 37 H 0.070 0.930 38 H 0.152 0.848 39 H 0.150 0.850 40 H 0.151 0.849 41 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -19.018 -9.646 15.830 26.558 hybrid contribution 0.311 -0.600 -0.808 1.054 sum -18.707 -10.245 15.021 26.087 Atomic orbital electron populations 1.20405 0.79989 1.05618 1.05850 1.28904 0.99008 0.80525 0.95940 1.71897 0.99740 1.28752 1.19630 1.25544 0.94904 0.88238 1.01396 1.17419 0.80906 0.97423 0.86576 0.85482 1.46263 1.33813 1.14560 1.44566 1.21740 0.80319 0.86401 0.81224 1.90703 1.70801 1.16807 1.60978 1.21898 0.96510 1.02493 0.95785 1.18919 0.92487 0.92143 0.96511 1.21235 1.14766 0.96295 1.24216 0.92524 1.25026 0.97642 0.94837 0.96875 1.70006 1.34252 1.05204 1.43266 0.86535 0.81028 0.79158 0.81242 1.19739 1.21013 1.21004 1.19998 0.99706 0.99352 0.94504 1.20922 0.93563 0.96386 0.97185 1.21221 1.00589 1.00158 0.92901 1.21054 0.95058 0.94684 0.99675 1.21109 0.98919 1.02202 0.95484 1.17494 0.87709 0.91115 0.94084 1.91528 1.55771 1.68910 1.94718 1.74573 0.97516 1.15256 1.20250 1.85301 1.11354 1.35777 1.65500 0.88426 0.87787 0.87683 0.76131 0.89937 0.89989 0.95730 0.95684 0.92979 0.84763 0.84975 0.84890 0.84570 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 -0.23 10.51 36.01 0.38 0.15 16 2 C 0.18 1.66 8.51 -13.05 -0.11 1.55 16 3 N -0.47 -6.10 11.55 -9.87 -0.11 -6.22 16 4 C 0.17 2.43 6.98 -156.38 -1.09 1.33 16 5 C 0.28 4.41 2.45 -70.24 -0.17 4.24 16 6 H 0.13 2.25 7.37 -51.93 -0.38 1.87 16 7 N -0.74 -11.37 3.68 -56.07 -0.21 -11.57 16 8 C 0.51 10.03 7.78 -10.98 -0.09 9.94 16 9 O -0.52 -12.34 15.64 5.56 0.09 -12.25 16 10 C -0.13 -2.57 5.64 -27.88 -0.16 -2.73 16 11 C 0.04 0.99 4.26 -27.88 -0.12 0.87 16 12 C -0.53 -14.93 9.11 -34.44 -0.31 -15.24 16 13 H 0.06 1.52 7.74 -52.48 -0.41 1.11 16 14 C 0.06 1.69 5.46 -17.82 -0.10 1.59 16 15 N -0.89 -27.45 13.29 55.43 0.74 -26.71 16 16 Si 0.89 21.70 29.54 -169.99 -5.02 16.68 16 17 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 18 H -0.28 -6.86 7.11 56.52 0.40 -6.45 16 19 H -0.28 -6.84 7.11 56.52 0.40 -6.44 16 20 C -0.13 -1.97 5.03 -104.56 -0.53 -2.49 16 21 C -0.06 -0.84 9.32 -39.60 -0.37 -1.20 16 22 C -0.13 -1.47 10.04 -39.58 -0.40 -1.87 16 23 C -0.09 -0.90 10.04 -39.59 -0.40 -1.29 16 24 C -0.16 -1.85 10.03 -39.51 -0.40 -2.24 16 25 C 0.12 1.66 7.24 -39.42 -0.29 1.38 16 26 F -0.13 -1.99 16.66 2.25 0.04 -1.95 16 27 N -0.37 -4.79 11.86 30.90 0.37 -4.43 16 28 O 0.08 0.88 11.31 18.11 0.20 1.08 16 29 H 0.10 0.13 8.14 -51.93 -0.42 -0.29 16 30 H 0.10 0.28 8.14 -51.93 -0.42 -0.14 16 31 H 0.10 0.30 8.14 -51.93 -0.42 -0.12 16 32 H 0.40 5.31 8.36 -40.82 -0.34 4.97 16 33 H 0.08 1.50 8.14 -51.93 -0.42 1.08 16 34 H 0.08 1.53 8.14 -51.93 -0.42 1.10 16 35 H 0.02 0.72 8.10 -51.93 -0.42 0.30 16 36 H 0.02 0.73 8.10 -51.93 -0.42 0.31 16 37 H 0.26 7.54 8.31 -40.82 -0.34 7.20 16 38 H 0.13 1.71 7.14 -52.48 -0.37 1.34 16 39 H 0.13 1.17 8.06 -52.49 -0.42 0.74 16 40 H 0.13 0.96 8.06 -52.49 -0.42 0.54 16 41 H 0.14 1.26 8.06 -52.49 -0.42 0.84 16 LS Contribution 367.27 15.07 5.53 5.53 Total: -1.00 -36.52 367.27 -7.38 -43.89 By element: Atomic # 1 Polarization: 6.82 SS G_CDS: -4.86 Total: 1.95 kcal Atomic # 6 Polarization: -1.87 SS G_CDS: -4.14 Total: -6.01 kcal Atomic # 7 Polarization: -49.71 SS G_CDS: 0.78 Total: -48.93 kcal Atomic # 8 Polarization: -11.46 SS G_CDS: 0.29 Total: -11.17 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 0.04 Total: -1.95 kcal Atomic # 14 Polarization: 21.70 SS G_CDS: -5.02 Total: 16.68 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -36.52 -7.38 -43.89 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000360367971.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 53.365 kcal (2) G-P(sol) polarization free energy of solvation -36.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 16.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.380 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.895 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.470 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds