Wall clock time and date at job start Tue Mar 31 2020 17:33:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 O 1.42901 * 109.47325 * 2 1 4 4 C 1.53007 * 109.47027 * 120.00112 * 2 1 3 5 5 C 1.53004 * 109.47027 * 179.97438 * 4 2 1 6 6 C 1.52992 * 109.47331 * 299.99704 * 5 4 2 7 7 N 1.46495 * 109.47246 * 179.97438 * 6 5 4 8 8 C 1.34783 * 119.99931 * 155.00072 * 7 6 5 9 9 O 1.21281 * 119.99796 * 0.02562 * 8 7 6 10 10 C 1.50697 * 119.99878 * 180.02562 * 8 7 6 11 11 C 1.50699 * 109.46970 * 180.02562 * 10 8 7 12 12 C 1.38328 * 119.96224 * 270.02075 * 11 10 8 13 13 C 1.38280 * 120.13484 * 180.02562 * 12 11 10 14 14 C 1.38120 * 120.07150 * 359.67534 * 13 12 11 15 15 C 1.38861 * 119.92830 * 0.59673 * 14 13 12 16 16 O 1.35751 * 120.06597 * 179.69892 * 15 14 13 17 17 C 1.34829 * 117.00376 * 354.17384 * 16 15 14 18 18 H 1.07998 * 119.99999 * 5.03596 * 17 16 15 19 19 C 1.38657 * 120.00083 * 185.03464 * 17 16 15 20 20 N 1.31555 * 119.99797 * 179.97438 * 19 17 16 21 21 Si 1.86799 * 119.99748 * 0.02562 * 19 17 16 22 22 H 1.48496 * 109.47410 * 90.00109 * 21 19 17 23 23 H 1.48504 * 109.46801 * 209.99865 * 21 19 17 24 24 H 1.48497 * 109.47495 * 329.99577 * 21 19 17 25 25 C 1.38073 * 119.96952 * 89.99515 * 11 10 8 26 26 C 1.53007 * 109.46823 * 60.00171 * 6 5 4 27 27 C 1.53001 * 109.47290 * 240.00048 * 2 1 3 28 28 H 1.08997 * 109.46848 * 300.00029 * 1 2 3 29 29 H 1.08998 * 109.46713 * 60.00403 * 1 2 3 30 30 H 1.08999 * 109.46706 * 179.97438 * 1 2 3 31 31 H 0.96701 * 114.00138 * 300.00147 * 3 2 1 32 32 H 1.09000 * 109.47121 * 59.99588 * 4 2 1 33 33 H 1.09003 * 109.46627 * 300.00054 * 4 2 1 34 34 H 1.08998 * 109.46713 * 179.97438 * 5 4 2 35 35 H 1.08999 * 109.46706 * 60.00284 * 5 4 2 36 36 H 1.08998 * 109.47401 * 300.00693 * 6 5 4 37 37 H 0.97001 * 120.00257 * 335.00869 * 7 6 5 38 38 H 1.08996 * 109.47386 * 59.99804 * 10 8 7 39 39 H 1.08997 * 109.47038 * 299.99640 * 10 8 7 40 40 H 1.08001 * 119.93314 * 359.97438 * 12 11 10 41 41 H 1.08007 * 119.96121 * 179.97438 * 13 12 11 42 42 H 1.08001 * 120.03709 * 180.32387 * 14 13 12 43 43 H 0.96998 * 119.99749 * 179.97438 * 20 19 17 44 44 H 1.08001 * 120.03594 * 0.04940 * 25 11 10 45 45 H 1.08993 * 109.47402 * 60.00125 * 26 6 5 46 46 H 1.09003 * 109.46627 * 179.97438 * 26 6 5 47 47 H 1.09001 * 109.47052 * 299.99629 * 27 2 1 48 48 H 1.08991 * 109.47309 * 59.99990 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0064 1.3473 0.0000 4 6 2.0400 -0.7213 1.2493 5 6 3.5701 -0.7219 1.2490 6 6 4.0796 -1.4435 -0.0002 7 7 5.5445 -1.4435 -0.0008 8 6 6.2182 -2.3998 -0.6703 9 8 5.6115 -3.2601 -1.2725 10 6 7.7251 -2.4002 -0.6704 11 6 8.2271 -3.5638 -1.4858 12 6 8.4568 -4.7852 -0.8782 13 6 8.9179 -5.8552 -1.6229 14 6 9.1442 -5.7092 -2.9776 15 6 8.9200 -4.4829 -3.5893 16 8 9.1474 -4.3347 -4.9194 17 6 9.7039 -5.3792 -5.5655 18 1 9.8728 -6.3093 -5.0433 19 6 10.0592 -5.2591 -6.9004 20 7 10.6026 -6.2780 -7.5305 21 14 9.7676 -3.6501 -7.8034 22 1 10.9632 -2.7805 -7.6640 23 1 9.5220 -3.9271 -9.2415 24 1 8.5858 -2.9636 -7.2227 25 6 8.4568 -3.4101 -2.8386 26 6 3.5696 -0.7222 -1.2495 27 6 2.0401 -0.7212 -1.2492 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 -0.0005 31 1 1.7211 1.8654 -0.7650 32 1 1.6766 -1.7489 1.2493 33 1 1.6766 -0.2074 2.1392 34 1 3.9333 -1.2353 2.1392 35 1 3.9337 0.3057 1.2488 36 1 3.7158 -2.4710 0.0000 37 1 6.0298 -0.7553 0.4807 38 1 8.0886 -2.4897 0.3533 39 1 8.0886 -1.4689 -1.1049 40 1 8.2764 -4.9030 0.1800 41 1 9.0966 -6.8074 -1.1456 42 1 9.4994 -6.5468 -3.5597 43 1 10.8509 -6.1942 -8.4645 44 1 8.2777 -2.4562 -3.3123 45 1 3.9333 0.3053 -1.2497 46 1 3.9330 -1.2361 -2.1394 47 1 1.6768 -1.7489 -1.2492 48 1 1.6768 -0.2075 -2.1392 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000760392073.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:33:45 Heat of formation + Delta-G solvation = -108.770058 kcal Electronic energy + Delta-G solvation = -28247.662964 eV Core-core repulsion = 24267.344428 eV Total energy + Delta-G solvation = -3980.318536 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 1.04 seconds Orbital eigenvalues (eV) -40.41181 -39.43900 -38.75515 -36.69686 -35.85953 -33.52823 -32.39839 -32.12111 -31.19927 -30.88202 -29.37856 -27.46919 -25.89156 -25.06816 -23.23511 -22.08015 -21.61189 -20.87586 -20.43295 -19.89181 -17.68464 -17.30527 -16.98693 -16.54408 -16.37094 -15.60692 -15.34313 -15.08121 -15.06368 -14.57579 -14.11125 -13.94217 -13.88124 -13.66343 -13.55332 -13.35296 -13.14840 -12.72246 -12.66601 -12.50063 -12.43229 -12.22340 -12.13328 -11.91168 -11.75882 -11.62746 -11.34661 -11.25654 -10.85312 -10.77238 -10.75591 -10.66859 -10.57074 -10.14888 -10.11614 -9.67417 -9.33641 -9.07103 -8.82146 -8.08389 -7.29780 -6.36088 -4.02530 2.07388 2.34838 2.78184 3.18031 3.26031 3.28584 3.44601 3.83707 4.26509 4.28523 4.35353 4.47110 4.53807 4.65730 4.78419 4.80968 4.99144 5.02470 5.11069 5.12589 5.14885 5.20353 5.22896 5.31419 5.38831 5.41138 5.49075 5.60610 5.62178 5.65397 5.74342 5.76333 5.83411 5.87915 5.90050 6.03600 6.12395 6.17807 6.31219 6.46904 6.59011 6.85012 7.16128 7.27366 7.30484 7.37519 7.49562 7.67206 7.86684 8.10111 8.34382 8.99624 9.63223 10.71855 Molecular weight = 333.18amu Principal moments of inertia in cm(-1) A = 0.015766 B = 0.002383 C = 0.002169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1775.495761 B =11748.558864 C =12905.182239 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.128 3.872 3 O -0.557 6.557 4 C -0.100 4.100 5 C -0.122 4.122 6 C 0.147 3.853 7 N -0.735 5.735 8 C 0.514 3.486 9 O -0.520 6.520 10 C -0.095 4.095 11 C -0.034 4.034 12 C -0.188 4.188 13 C -0.076 4.076 14 C -0.218 4.218 15 C 0.160 3.840 16 O -0.220 6.220 17 C -0.387 4.387 18 H 0.106 0.894 19 C 0.062 3.938 20 N -0.882 5.882 21 Si 0.905 3.095 22 H -0.274 1.274 23 H -0.283 1.283 24 H -0.260 1.260 25 C -0.175 4.175 26 C -0.126 4.126 27 C -0.142 4.142 28 H 0.063 0.937 29 H 0.058 0.942 30 H 0.066 0.934 31 H 0.374 0.626 32 H 0.077 0.923 33 H 0.073 0.927 34 H 0.067 0.933 35 H 0.076 0.924 36 H 0.084 0.916 37 H 0.398 0.602 38 H 0.098 0.902 39 H 0.099 0.901 40 H 0.104 0.896 41 H 0.110 0.890 42 H 0.132 0.868 43 H 0.278 0.722 44 H 0.113 0.887 45 H 0.069 0.931 46 H 0.069 0.931 47 H 0.074 0.926 48 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.326 14.832 18.963 29.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.088 3.912 3 O -0.363 6.363 4 C -0.138 4.138 5 C -0.160 4.160 6 C 0.043 3.957 7 N -0.387 5.387 8 C 0.300 3.700 9 O -0.394 6.394 10 C -0.135 4.135 11 C -0.035 4.035 12 C -0.207 4.207 13 C -0.095 4.095 14 C -0.237 4.237 15 C 0.108 3.892 16 O -0.125 6.125 17 C -0.463 4.463 18 H 0.123 0.877 19 C -0.140 4.140 20 N -0.520 5.520 21 Si 0.730 3.270 22 H -0.199 1.199 23 H -0.208 1.208 24 H -0.184 1.184 25 C -0.194 4.194 26 C -0.165 4.165 27 C -0.180 4.180 28 H 0.082 0.918 29 H 0.077 0.923 30 H 0.085 0.915 31 H 0.221 0.779 32 H 0.096 0.904 33 H 0.091 0.909 34 H 0.086 0.914 35 H 0.095 0.905 36 H 0.102 0.898 37 H 0.232 0.768 38 H 0.116 0.884 39 H 0.117 0.883 40 H 0.122 0.878 41 H 0.128 0.872 42 H 0.150 0.850 43 H 0.089 0.911 44 H 0.131 0.869 45 H 0.088 0.912 46 H 0.088 0.912 47 H 0.092 0.908 48 H 0.085 0.915 Dipole moment (debyes) X Y Z Total from point charges -16.441 14.077 18.698 28.602 hybrid contribution -0.119 0.903 -0.882 1.268 sum -16.559 14.980 17.816 28.566 Atomic orbital electron populations 1.22490 0.95836 1.02864 1.02476 1.21218 0.92103 0.82589 0.95316 1.86530 1.77216 1.23102 1.49435 1.21462 0.95401 1.00136 0.96783 1.21717 0.95672 1.01558 0.97069 1.20903 0.79803 1.00394 0.94623 1.46106 1.06775 1.31147 1.54721 1.20751 0.90125 0.80863 0.78261 1.90754 1.70119 1.36757 1.41724 1.20599 0.91586 0.99443 1.01847 1.18660 0.98490 0.93623 0.92678 1.20419 1.08124 0.93285 0.98851 1.20735 0.97513 0.97635 0.93584 1.21290 1.08647 0.98420 0.95331 1.19011 0.93306 0.92975 0.83863 1.83567 1.71291 1.41477 1.16192 1.20765 1.38995 0.91877 0.94684 0.87669 1.24452 0.95401 0.98618 0.95579 1.69649 1.40214 1.30460 1.11714 0.86189 0.79842 0.82681 0.78243 1.19931 1.20840 1.18390 1.19936 1.08810 0.97953 0.92691 1.21829 0.94732 1.01295 0.98625 1.22178 0.96417 1.01724 0.97695 0.91813 0.92288 0.91480 0.77866 0.90448 0.90880 0.91428 0.90496 0.89752 0.76849 0.88354 0.88324 0.87757 0.87201 0.85017 0.91149 0.86889 0.91224 0.91242 0.90773 0.91456 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.99 8.82 37.16 0.33 -0.66 16 2 C 0.13 0.86 0.98 -90.61 -0.09 0.77 16 3 O -0.56 -3.98 11.63 -35.23 -0.41 -4.39 16 4 C -0.10 -0.68 4.95 -26.73 -0.13 -0.81 16 5 C -0.12 -0.91 5.25 -26.73 -0.14 -1.05 16 6 C 0.15 1.44 2.45 -67.93 -0.17 1.27 16 7 N -0.73 -7.33 5.08 -53.81 -0.27 -7.60 16 8 C 0.51 7.14 7.79 -10.98 -0.09 7.06 16 9 O -0.52 -9.80 15.70 5.56 0.09 -9.71 16 10 C -0.09 -1.20 5.83 -29.04 -0.17 -1.37 16 11 C -0.03 -0.60 4.37 -104.65 -0.46 -1.06 16 12 C -0.19 -3.34 9.70 -39.53 -0.38 -3.73 16 13 C -0.08 -1.47 10.04 -39.61 -0.40 -1.87 16 14 C -0.22 -4.95 9.17 -39.39 -0.36 -5.31 16 15 C 0.16 3.89 6.65 -39.11 -0.26 3.63 16 16 O -0.22 -6.03 8.59 0.05 0.00 -6.03 16 17 C -0.39 -11.26 9.95 30.89 0.31 -10.95 16 18 H 0.11 3.12 5.44 -52.49 -0.29 2.83 16 19 C 0.06 1.79 5.49 -17.52 -0.10 1.69 16 20 N -0.88 -26.01 13.96 55.48 0.77 -25.24 16 21 Si 0.90 22.23 28.62 -169.99 -4.86 17.37 16 22 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 23 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 24 H -0.26 -6.45 7.11 56.52 0.40 -6.05 16 25 C -0.17 -3.66 9.64 -39.40 -0.38 -4.04 16 26 C -0.13 -1.25 5.35 -26.75 -0.14 -1.39 16 27 C -0.14 -1.11 4.91 -26.76 -0.13 -1.25 16 28 H 0.06 0.35 8.14 -51.93 -0.42 -0.07 16 29 H 0.06 0.29 8.14 -51.93 -0.42 -0.14 16 30 H 0.07 0.35 8.14 -51.93 -0.42 -0.07 16 31 H 0.37 1.56 9.05 45.56 0.41 1.97 16 32 H 0.08 0.49 8.14 -51.93 -0.42 0.07 16 33 H 0.07 0.47 8.14 -51.93 -0.42 0.05 16 34 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 35 H 0.08 0.59 7.68 -51.93 -0.40 0.19 16 36 H 0.08 1.00 7.58 -51.93 -0.39 0.61 16 37 H 0.40 2.77 8.60 -40.82 -0.35 2.42 16 38 H 0.10 0.95 8.09 -51.93 -0.42 0.53 16 39 H 0.10 1.05 8.08 -51.93 -0.42 0.63 16 40 H 0.10 1.56 8.06 -52.49 -0.42 1.14 16 41 H 0.11 1.80 8.06 -52.48 -0.42 1.38 16 42 H 0.13 3.12 5.64 -52.49 -0.30 2.82 16 43 H 0.28 7.58 8.31 -40.82 -0.34 7.24 16 44 H 0.11 2.23 8.06 -52.49 -0.42 1.81 16 45 H 0.07 0.67 7.68 -51.93 -0.40 0.27 16 46 H 0.07 0.88 8.14 -51.93 -0.42 0.46 16 47 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 48 H 0.07 0.48 8.14 -51.93 -0.42 0.05 16 LS Contribution 389.82 15.07 5.87 5.87 Total: -1.00 -34.52 389.82 -8.33 -42.85 By element: Atomic # 1 Polarization: 12.70 SS G_CDS: -6.76 Total: 5.94 kcal Atomic # 6 Polarization: -16.30 SS G_CDS: -2.76 Total: -19.06 kcal Atomic # 7 Polarization: -33.34 SS G_CDS: 0.50 Total: -32.84 kcal Atomic # 8 Polarization: -19.81 SS G_CDS: -0.32 Total: -20.13 kcal Atomic # 14 Polarization: 22.23 SS G_CDS: -4.86 Total: 17.37 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -34.52 -8.33 -42.85 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000760392073.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.919 kcal (2) G-P(sol) polarization free energy of solvation -34.522 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.329 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.851 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.04 seconds