Wall clock time and date at job start Tue Mar 31 2020 18:08:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 N 1.46498 * 109.47320 * 2 1 4 4 C 1.46498 * 119.99781 * 270.00166 * 3 2 1 5 5 C 1.50703 * 109.47051 * 269.99863 * 4 3 2 6 6 H 1.07997 * 120.00164 * 359.97438 * 5 4 3 7 7 C 1.37881 * 120.00018 * 180.02562 * 5 4 3 8 8 N 1.31517 * 119.99856 * 0.02562 * 7 5 4 9 9 Si 1.86801 * 120.00157 * 179.97438 * 7 5 4 10 10 H 1.48498 * 109.46641 * 89.99886 * 9 7 5 11 11 H 1.48489 * 109.47354 * 210.00097 * 9 7 5 12 12 H 1.48501 * 109.46924 * 330.00480 * 9 7 5 13 13 C 1.34773 * 120.00052 * 89.99853 * 3 2 1 14 14 O 1.21280 * 120.00125 * 180.02562 * 13 3 2 15 15 C 1.50703 * 120.00078 * 0.02562 * 13 3 2 16 16 N 1.46899 * 109.46860 * 180.02562 * 15 13 3 17 17 C 1.48108 * 111.00155 * 66.04669 * 16 15 13 18 18 C 1.46134 * 112.18875 * 156.48704 * 17 16 15 19 19 C 1.54255 * 111.90643 * 60.86089 * 18 17 16 20 20 N 1.44245 * 108.64285 * 281.38370 * 19 18 17 21 21 C 1.46907 * 110.99707 * 219.84625 * 20 19 18 22 22 C 1.53004 * 109.46935 * 183.55855 * 21 20 19 23 23 F 1.39896 * 109.47289 * 306.27559 * 22 21 20 24 24 F 1.39904 * 109.46909 * 66.27454 * 22 21 20 25 25 C 1.48196 * 114.27123 * 93.39472 * 20 19 18 26 26 C 1.44258 * 111.00243 * 303.39856 * 16 15 13 27 27 H 1.08999 * 109.47186 * 60.00007 * 1 2 3 28 28 H 1.09000 * 109.47528 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47519 * 300.00228 * 1 2 3 30 30 H 1.09006 * 109.46672 * 239.99893 * 2 1 3 31 31 H 1.08999 * 109.47186 * 119.99993 * 2 1 3 32 32 H 1.09001 * 109.47853 * 29.99821 * 4 3 2 33 33 H 1.09000 * 109.47171 * 150.00080 * 4 3 2 34 34 H 0.96998 * 119.99701 * 180.02562 * 8 7 5 35 35 H 1.08999 * 109.47084 * 59.99912 * 15 13 3 36 36 H 1.08998 * 109.46696 * 299.99642 * 15 13 3 37 37 H 1.09001 * 108.93540 * 35.78975 * 17 16 15 38 38 H 1.08998 * 108.93518 * 277.18355 * 17 16 15 39 39 H 1.09001 * 108.99548 * 181.48846 * 18 17 16 40 40 H 1.09005 * 108.99353 * 300.24029 * 18 17 16 41 41 H 1.09004 * 109.60467 * 41.13141 * 19 18 17 42 42 H 1.08997 * 109.60481 * 161.63246 * 19 18 17 43 43 H 1.08995 * 109.47015 * 303.56009 * 21 20 19 44 44 H 1.08992 * 109.47011 * 63.56048 * 21 20 19 45 45 H 1.08993 * 109.46828 * 186.26949 * 22 21 20 46 46 H 1.09000 * 108.82104 * 78.98624 * 25 20 19 47 47 H 1.08999 * 108.82272 * 197.39003 * 25 20 19 48 48 H 1.09003 * 108.86495 * 96.34329 * 26 16 15 49 49 H 1.09000 * 108.78366 * 337.87879 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.2625 2.0717 -1.2687 5 6 3.6857 1.8349 -1.7038 6 1 4.3428 1.2308 -1.0958 7 6 4.1494 2.3903 -2.8775 8 7 3.3496 3.1272 -3.6172 9 14 5.9138 2.0973 -3.4165 10 1 5.9775 0.8766 -4.2596 11 1 6.3927 3.2650 -4.1989 12 1 6.7736 1.9173 -2.2192 13 6 2.2429 2.0165 1.1672 14 8 2.6468 3.1601 1.1672 15 6 1.9923 1.3060 2.4723 16 7 2.3098 2.2063 3.5888 17 6 1.3748 3.3543 3.6274 18 6 1.2830 3.9467 4.9601 19 6 2.6441 4.4869 5.4448 20 7 3.4422 3.3778 5.9070 21 6 4.1894 3.7364 7.1200 22 6 5.0894 2.5684 7.5285 23 9 4.3207 1.4052 7.6430 24 9 6.0785 2.3800 6.5572 25 6 4.3424 2.8048 4.8787 26 6 3.6693 2.6805 3.5000 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8899 30 1 1.8932 -0.5139 -0.8900 31 1 1.8933 -0.5138 0.8900 32 1 1.5817 1.6877 -2.0285 33 1 2.0955 3.1410 -1.1384 34 1 3.6757 3.5177 -4.4430 35 1 2.6228 0.4187 2.5299 36 1 0.9444 1.0115 2.5302 37 1 0.3850 3.0147 3.3222 38 1 1.7184 4.1140 2.9254 39 1 0.5645 4.7660 4.9354 40 1 0.9316 3.1897 5.6614 41 1 3.1539 4.9862 4.6208 42 1 2.4881 5.1911 6.2620 43 1 4.8024 4.6157 6.9225 44 1 3.4896 3.9551 7.9264 45 1 5.5589 2.7896 8.4869 46 1 5.2207 3.4435 4.7849 47 1 4.6616 1.8144 5.2031 48 1 3.6708 3.6579 3.0176 49 1 4.2443 1.9852 2.8884 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000091084883.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 18:08:45 Heat of formation + Delta-G solvation = -110.130160 kcal Electronic energy + Delta-G solvation = -30957.840539 eV Core-core repulsion = 26591.359341 eV Total energy + Delta-G solvation = -4366.481198 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 333.197 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -49.10110 -47.01450 -40.01004 -38.40944 -36.05231 -34.97641 -32.91951 -32.66376 -30.61183 -30.07737 -28.71678 -27.01305 -25.44820 -25.08214 -23.03582 -22.71730 -22.33477 -20.52224 -20.08908 -18.27633 -17.81574 -17.45441 -16.73120 -16.55177 -16.28482 -15.87155 -15.64684 -15.18050 -14.91167 -14.62941 -14.37982 -14.14929 -13.87364 -13.64230 -13.40433 -13.35722 -13.21739 -13.11027 -12.82245 -12.58513 -12.51733 -12.41837 -12.03212 -11.80132 -11.64148 -11.46409 -11.22428 -11.01563 -10.92195 -10.89544 -10.72272 -10.67637 -10.50684 -10.49997 -10.25508 -10.12023 -9.64401 -9.44861 -8.44583 -8.23766 -7.73072 -7.64832 -6.05316 -4.09964 3.28818 3.35068 3.37614 3.43254 3.56700 3.68881 3.96429 4.05258 4.16491 4.34894 4.44058 4.66052 4.97897 5.04581 5.11874 5.18418 5.27092 5.29428 5.31700 5.34974 5.37078 5.43156 5.55318 5.64842 5.69462 5.77059 5.80482 5.89891 5.95252 5.99737 6.06351 6.12594 6.22148 6.24973 6.42793 6.49392 6.53434 6.92712 7.03265 7.13915 7.30026 7.40282 7.44317 7.56049 7.91362 8.23319 8.43556 8.89407 9.08890 9.55279 11.02683 Molecular weight = 333.20amu Principal moments of inertia in cm(-1) A = 0.013138 B = 0.003295 C = 0.002967 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2130.773228 B = 8494.606090 C = 9433.984132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.168 4.168 2 C 0.106 3.894 3 N -0.596 5.596 4 C 0.246 3.754 5 C -0.524 4.524 6 H 0.056 0.944 7 C 0.061 3.939 8 N -0.895 5.895 9 Si 0.897 3.103 10 H -0.280 1.280 11 H -0.285 1.285 12 H -0.274 1.274 13 C 0.473 3.527 14 O -0.544 6.544 15 C 0.034 3.966 16 N -0.496 5.496 17 C 0.049 3.951 18 C -0.106 4.106 19 C 0.067 3.933 20 N -0.534 5.534 21 C 0.008 3.992 22 C 0.265 3.735 23 F -0.193 7.193 24 F -0.205 7.205 25 C 0.064 3.936 26 C 0.055 3.945 27 H 0.059 0.941 28 H 0.060 0.940 29 H 0.050 0.950 30 H 0.081 0.919 31 H 0.066 0.934 32 H 0.030 0.970 33 H 0.041 0.959 34 H 0.263 0.737 35 H 0.097 0.903 36 H 0.096 0.904 37 H 0.060 0.940 38 H 0.057 0.943 39 H 0.064 0.936 40 H 0.076 0.924 41 H 0.043 0.957 42 H 0.064 0.936 43 H 0.058 0.942 44 H 0.101 0.899 45 H 0.109 0.891 46 H 0.038 0.962 47 H 0.079 0.921 48 H 0.061 0.939 49 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.742 -1.664 22.016 22.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.019 4.019 3 N -0.328 5.328 4 C 0.127 3.873 5 C -0.563 4.563 6 H 0.074 0.926 7 C -0.141 4.141 8 N -0.534 5.534 9 Si 0.725 3.275 10 H -0.206 1.206 11 H -0.211 1.211 12 H -0.199 1.199 13 C 0.259 3.741 14 O -0.423 6.423 15 C -0.098 4.098 16 N -0.218 5.218 17 C -0.078 4.078 18 C -0.144 4.144 19 C -0.061 4.061 20 N -0.259 5.259 21 C -0.121 4.121 22 C 0.210 3.790 23 F -0.174 7.174 24 F -0.187 7.187 25 C -0.063 4.063 26 C -0.074 4.074 27 H 0.078 0.922 28 H 0.079 0.921 29 H 0.069 0.931 30 H 0.100 0.900 31 H 0.084 0.916 32 H 0.048 0.952 33 H 0.059 0.941 34 H 0.072 0.928 35 H 0.115 0.885 36 H 0.114 0.886 37 H 0.079 0.921 38 H 0.075 0.925 39 H 0.082 0.918 40 H 0.094 0.906 41 H 0.062 0.938 42 H 0.083 0.917 43 H 0.076 0.924 44 H 0.120 0.880 45 H 0.127 0.873 46 H 0.056 0.944 47 H 0.098 0.902 48 H 0.079 0.921 49 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -2.892 -1.591 22.348 22.590 hybrid contribution 1.640 0.716 -1.596 2.398 sum -1.252 -0.875 20.752 20.808 Atomic orbital electron populations 1.22208 0.96778 1.01446 1.02215 1.21419 0.93517 0.84222 1.02703 1.48384 1.63209 1.13206 1.07976 1.19229 0.96151 0.93534 0.78400 1.21428 0.96931 1.31767 1.06208 0.92582 1.24934 0.97812 0.94922 0.96427 1.69935 1.35703 1.33456 1.14335 0.86514 0.84737 0.77688 0.78599 1.20606 1.21108 1.19928 1.21654 0.78640 0.87546 0.86308 1.90626 1.46296 1.18209 1.87120 1.22508 1.03168 0.96789 0.87293 1.61928 1.02990 1.17564 1.39311 1.21138 0.96125 0.93207 0.97356 1.20546 0.96008 1.00106 0.97760 1.21776 0.94458 0.91035 0.98840 1.60527 1.25675 1.34139 1.05608 1.23271 0.97318 0.95336 0.96178 1.21920 0.82365 0.83577 0.91095 1.93017 1.76378 1.51537 1.96514 1.92990 1.63541 1.95857 1.66293 1.22896 0.92470 0.99828 0.91100 1.21939 0.89571 1.01448 0.94430 0.92172 0.92116 0.93077 0.90046 0.91604 0.95243 0.94125 0.92759 0.88483 0.88608 0.92133 0.92483 0.91793 0.90585 0.93839 0.91742 0.92404 0.88044 0.87334 0.94405 0.90220 0.92067 0.91380 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.25 10.24 37.15 0.38 -1.87 16 2 C 0.11 1.68 5.93 -4.05 -0.02 1.66 16 3 N -0.60 -12.43 2.46 -175.06 -0.43 -12.86 16 4 C 0.25 6.43 5.16 -5.19 -0.03 6.41 16 5 C -0.52 -14.92 9.39 -34.44 -0.32 -15.24 16 6 H 0.06 1.60 7.81 -52.49 -0.41 1.19 16 7 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 8 N -0.90 -26.75 13.29 55.43 0.74 -26.01 16 9 Si 0.90 22.04 29.54 -169.99 -5.02 17.01 16 10 H -0.28 -6.67 7.11 56.52 0.40 -6.27 16 11 H -0.29 -6.95 7.11 56.52 0.40 -6.55 16 12 H -0.27 -6.74 7.11 56.52 0.40 -6.34 16 13 C 0.47 9.57 6.93 -10.99 -0.08 9.49 16 14 O -0.54 -13.02 11.90 5.56 0.07 -12.95 16 15 C 0.03 0.53 4.13 -4.98 -0.02 0.51 16 16 N -0.50 -7.65 4.62 -240.68 -1.11 -8.76 16 17 C 0.05 0.72 4.34 -6.42 -0.03 0.69 16 18 C -0.11 -1.26 5.66 -29.33 -0.17 -1.42 16 19 C 0.07 0.77 5.41 -4.59 -0.02 0.74 16 20 N -0.53 -6.37 4.09 -234.27 -0.96 -7.32 16 21 C 0.01 0.07 5.20 -3.82 -0.02 0.05 16 22 C 0.26 2.30 5.14 37.16 0.19 2.49 16 23 F -0.19 -2.24 16.76 2.25 0.04 -2.21 16 24 F -0.21 -2.32 13.87 2.25 0.03 -2.29 16 25 C 0.06 0.90 4.25 -2.63 -0.01 0.88 16 26 C 0.06 0.91 3.78 -4.75 -0.02 0.89 16 27 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 28 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 29 H 0.05 0.65 7.22 -51.93 -0.38 0.27 16 30 H 0.08 1.36 8.07 -51.93 -0.42 0.94 16 31 H 0.07 0.88 6.44 -51.93 -0.33 0.54 16 32 H 0.03 0.78 8.07 -51.93 -0.42 0.37 16 33 H 0.04 1.20 7.42 -51.93 -0.39 0.82 16 34 H 0.26 7.42 8.31 -40.82 -0.34 7.08 16 35 H 0.10 1.39 7.37 -51.93 -0.38 1.01 16 36 H 0.10 1.29 6.95 -51.93 -0.36 0.93 16 37 H 0.06 0.85 7.71 -51.93 -0.40 0.45 16 38 H 0.06 1.01 5.94 -51.93 -0.31 0.70 16 39 H 0.06 0.65 8.14 -51.93 -0.42 0.23 16 40 H 0.08 0.93 8.12 -51.93 -0.42 0.51 16 41 H 0.04 0.57 6.96 -51.93 -0.36 0.21 16 42 H 0.06 0.58 7.61 -51.93 -0.40 0.19 16 43 H 0.06 0.44 8.14 -51.93 -0.42 0.02 16 44 H 0.10 0.67 8.13 -51.93 -0.42 0.24 16 45 H 0.11 0.51 8.14 -51.93 -0.42 0.09 16 46 H 0.04 0.53 7.37 -51.93 -0.38 0.14 16 47 H 0.08 1.17 6.13 -51.93 -0.32 0.85 16 48 H 0.06 1.16 5.36 -51.93 -0.28 0.88 16 49 H 0.07 1.21 7.36 -51.93 -0.38 0.83 16 LS Contribution 377.94 15.07 5.70 5.70 Total: -1.00 -33.50 377.94 -9.23 -42.73 By element: Atomic # 1 Polarization: 8.05 SS G_CDS: -8.01 Total: 0.04 kcal Atomic # 6 Polarization: 7.20 SS G_CDS: -0.26 Total: 6.94 kcal Atomic # 7 Polarization: -53.19 SS G_CDS: -1.76 Total: -54.96 kcal Atomic # 8 Polarization: -13.02 SS G_CDS: 0.07 Total: -12.95 kcal Atomic # 9 Polarization: -4.57 SS G_CDS: 0.07 Total: -4.50 kcal Atomic # 14 Polarization: 22.04 SS G_CDS: -5.02 Total: 17.01 kcal Total LS contribution 5.70 Total: 5.70 kcal Total: -33.50 -9.23 -42.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000091084883.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.401 kcal (2) G-P(sol) polarization free energy of solvation -33.503 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -100.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.226 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.729 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.130 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds