Wall clock time and date at job start Tue Mar 31 2020 17:30:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 N 1.46506 * 109.46775 * 185.24636 * 3 2 1 5 5 C 1.33234 * 119.99487 * 263.09572 * 4 3 2 6 6 H 1.08004 * 119.99571 * 201.65766 * 5 4 3 7 7 C 1.46795 * 120.00339 * 21.66883 * 5 4 3 8 8 N 1.29314 * 119.99965 * 9.77744 * 7 5 4 9 9 Si 1.86793 * 120.00008 * 189.78360 * 7 5 4 10 10 H 1.48506 * 109.47416 * 59.99559 * 9 7 5 11 11 H 1.48493 * 109.47492 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.47179 * 299.99800 * 9 7 5 13 13 C 1.34764 * 120.00072 * 83.09865 * 4 3 2 14 14 O 1.21652 * 120.00148 * 179.97438 * 13 4 3 15 15 C 1.46122 * 120.00157 * 359.97438 * 13 4 3 16 16 C 1.35091 * 119.99833 * 173.37626 * 15 13 4 17 17 C 1.47061 * 120.00415 * 348.73876 * 16 15 13 18 18 C 1.39951 * 120.15700 * 314.80473 * 17 16 15 19 19 C 1.37794 * 119.82949 * 179.71649 * 18 17 16 20 20 C 1.38592 * 120.16795 * 0.56079 * 19 18 17 21 21 Cl 1.73591 * 119.83852 * 179.74020 * 20 19 18 22 22 C 1.38550 * 120.32121 * 359.71476 * 20 19 18 23 23 N 1.48010 * 119.91608 * 180.02562 * 22 20 19 24 24 O 1.31702 * 120.00191 * 179.97438 * 23 22 20 25 25 O 1.31704 * 120.00008 * 359.97438 * 23 22 20 26 26 C 1.37834 * 120.16325 * 359.97438 * 22 20 19 27 27 H 4.40637 * 5.51390 * 179.97438 * 4 1 2 28 28 H 1.09000 * 109.47156 * 65.25004 * 3 2 1 29 29 H 1.08993 * 109.47049 * 305.24206 * 3 2 1 30 30 H 0.96997 * 119.99937 * 180.02562 * 8 7 5 31 31 H 1.08002 * 119.99670 * 353.09971 * 15 13 4 32 32 H 1.08004 * 119.99798 * 168.73617 * 16 15 13 33 33 H 1.07998 * 120.08330 * 359.97438 * 18 17 16 34 34 H 1.08007 * 119.91534 * 180.25535 * 19 18 17 35 35 H 1.08003 * 120.08172 * 179.97438 * 26 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1337 1.3764 0.1263 5 6 3.4861 2.0606 -0.9612 6 1 4.1535 2.9054 -0.8749 7 6 2.9672 1.6665 -2.2766 8 7 2.0271 0.7827 -2.3626 9 14 3.6651 2.4414 -3.8264 10 1 5.1192 2.1523 -3.9129 11 1 2.9771 1.8770 -5.0151 12 1 3.4544 3.9107 -3.7832 13 6 3.2258 1.9497 1.3424 14 8 3.6311 3.0919 1.4474 15 6 2.8387 1.1994 2.5351 16 6 3.0556 1.7220 3.7618 17 6 3.8959 2.9194 3.9129 18 6 5.1146 3.0136 3.2313 19 6 5.8939 4.1411 3.3732 20 6 5.4792 5.1752 4.1976 21 17 6.4709 6.5888 4.3754 22 6 4.2767 5.0864 4.8800 23 7 3.8423 6.1963 5.7576 24 8 2.6993 6.1138 6.4067 25 8 4.5987 7.2663 5.8894 26 6 3.4835 3.9675 4.7429 27 1 -1.0502 -0.0004 -0.0002 28 1 3.0095 -0.4294 -0.9333 29 1 3.0096 -0.5921 0.8393 30 1 1.6845 0.5221 -3.2317 31 1 2.3752 0.2290 2.4357 32 1 2.6117 1.2606 4.6315 33 1 5.4414 2.2066 2.5924 34 1 6.8327 4.2171 2.8446 35 1 2.5466 3.8995 5.2758 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491020974.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 17:30:29 Heat of formation + Delta-G solvation = 123.860099 kcal Electronic energy + Delta-G solvation = -25350.328434 eV Core-core repulsion = 21347.881469 eV Total energy + Delta-G solvation = -4002.446965 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 334.055 amu Computer time = 2.14 seconds Orbital eigenvalues (eV) -40.11998 -39.05445 -37.96214 -36.66958 -35.55082 -34.13020 -33.38478 -32.63334 -31.74905 -31.57888 -29.69438 -26.84866 -26.37931 -25.34839 -23.25885 -22.59486 -21.15485 -19.01981 -18.30547 -17.86807 -17.77735 -16.86750 -16.68158 -16.59364 -15.80833 -15.49057 -15.16589 -14.53182 -14.33277 -14.19084 -13.74203 -13.50801 -13.09786 -12.76309 -12.70790 -12.38774 -12.09653 -11.93216 -11.82126 -11.53682 -11.36871 -11.30491 -10.98953 -10.93195 -10.65233 -10.42238 -10.08123 -9.81010 -9.74075 -9.62951 -9.28499 -9.16263 -8.66582 -8.40626 -7.91087 -6.93728 -4.03909 -0.44463 0.72055 1.29713 1.38186 1.89735 1.95292 2.91601 2.95935 2.97969 3.47275 3.53461 3.72532 3.81095 4.02508 4.35854 4.65122 4.67079 4.73806 5.01583 5.02063 5.07621 5.19585 5.50524 5.56039 5.58504 5.79384 5.96273 5.99372 6.05352 6.22366 6.42337 6.53069 6.61587 6.69288 6.75201 6.84661 7.02601 7.65461 8.00096 8.51037 8.73903 8.95518 9.71636 10.01662 Molecular weight = 334.06amu Principal moments of inertia in cm(-1) A = 0.014999 B = 0.003442 C = 0.003030 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1866.400911 B = 8131.705933 C = 9238.685921 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.248 4.248 2 C -0.124 4.124 3 C 0.217 3.783 4 N -0.382 5.382 5 C -0.329 4.329 6 H 0.115 0.885 7 C 0.041 3.959 8 N -0.812 5.812 9 Si 0.935 3.065 10 H -0.265 1.265 11 H -0.279 1.279 12 H -0.265 1.265 13 C 0.410 3.590 14 O -0.589 6.589 15 C -0.138 4.138 16 C -0.121 4.121 17 C -0.019 4.019 18 C 0.037 3.963 19 C -0.125 4.125 20 C 0.017 3.983 21 Cl -0.023 7.023 22 C -0.016 4.016 23 N -0.008 5.008 24 O -0.199 6.199 25 O -0.164 6.164 26 C -0.042 4.042 27 H 0.202 0.798 28 H 0.118 0.882 29 H 0.069 0.931 30 H 0.285 0.715 31 H 0.123 0.877 32 H 0.131 0.869 33 H 0.144 0.856 34 H 0.150 0.850 35 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.601 -3.969 6.299 8.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.267 4.267 2 C -0.125 4.125 3 C 0.095 3.905 4 N -0.091 5.091 5 C -0.459 4.459 6 H 0.133 0.867 7 C -0.175 4.175 8 N -0.443 5.443 9 Si 0.759 3.241 10 H -0.190 1.190 11 H -0.204 1.204 12 H -0.190 1.190 13 C 0.206 3.794 14 O -0.480 6.480 15 C -0.159 4.159 16 C -0.143 4.143 17 C -0.020 4.020 18 C 0.017 3.983 19 C -0.144 4.144 20 C -0.012 4.012 21 Cl 0.007 6.993 22 C -0.104 4.104 23 N 0.466 4.534 24 O -0.385 6.385 25 O -0.360 6.360 26 C -0.061 4.061 27 H 0.219 0.781 28 H 0.135 0.865 29 H 0.087 0.913 30 H 0.098 0.902 31 H 0.140 0.860 32 H 0.149 0.851 33 H 0.161 0.839 34 H 0.168 0.832 35 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 4.896 -3.937 5.732 8.504 hybrid contribution -0.518 0.677 -0.855 1.207 sum 4.378 -3.261 4.876 7.319 Atomic orbital electron populations 1.24384 0.95484 1.01349 1.05460 1.23034 0.94239 0.99018 0.96258 1.18563 0.84557 0.84811 1.02598 1.42834 1.49682 1.10235 1.06326 1.20727 1.26907 1.15152 0.83096 0.86749 1.27118 0.94157 0.95787 1.00398 1.68993 1.20778 1.26879 1.27620 0.85846 0.79557 0.80129 0.78553 1.18981 1.20448 1.19017 1.17906 0.90523 0.87478 0.83468 1.90617 1.54206 1.18449 1.84717 1.23312 1.00310 0.98972 0.93345 1.21713 1.00071 0.95363 0.97160 1.18790 0.94425 0.94147 0.94640 1.21602 0.90511 0.96603 0.89556 1.20914 1.02182 0.92290 0.99035 1.20790 0.91043 0.91529 0.97797 1.98428 1.67789 1.37109 1.95994 1.19762 0.98195 0.89905 1.02551 1.50323 1.01299 1.02432 0.99319 1.96243 1.06573 1.88597 1.47107 1.96294 1.50682 1.18448 1.70561 1.21054 0.98664 0.89770 0.96651 0.78103 0.86468 0.91307 0.90222 0.85951 0.85125 0.83869 0.83220 0.82800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 51. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -4.53 19.25 29.55 0.57 -3.96 16 2 C -0.12 -2.43 11.06 -37.12 -0.41 -2.84 16 3 C 0.22 4.10 4.77 -6.82 -0.03 4.07 16 4 N -0.38 -8.31 2.51 -118.06 -0.30 -8.61 16 5 C -0.33 -7.83 9.52 -13.49 -0.13 -7.96 16 6 H 0.11 2.88 7.42 -52.48 -0.39 2.49 16 7 C 0.04 0.91 5.27 -15.15 -0.08 0.83 16 8 N -0.81 -18.05 9.15 56.00 0.51 -17.54 16 9 Si 0.93 17.70 29.65 -169.99 -5.04 12.65 16 10 H -0.27 -4.92 7.11 56.52 0.40 -4.51 16 11 H -0.28 -5.17 7.11 56.52 0.40 -4.77 16 12 H -0.27 -5.25 7.11 56.52 0.40 -4.85 16 13 C 0.41 8.61 6.56 -13.10 -0.09 8.53 16 14 O -0.59 -13.81 11.90 5.23 0.06 -13.75 16 15 C -0.14 -2.25 8.89 -37.54 -0.33 -2.59 16 16 C -0.12 -1.73 9.80 -37.12 -0.36 -2.10 16 17 C -0.02 -0.29 4.47 -105.05 -0.47 -0.76 16 18 C 0.04 0.57 6.66 -39.10 -0.26 0.31 16 19 C -0.12 -1.81 9.81 -39.61 -0.39 -2.20 16 20 C 0.02 0.28 6.33 -39.34 -0.25 0.03 16 21 Cl -0.02 -0.34 25.74 -51.86 -1.33 -1.67 16 22 C -0.02 -0.27 6.88 -79.98 -0.55 -0.82 16 23 N -0.01 -0.15 4.98 33.95 0.17 0.02 16 24 O -0.20 -3.73 19.14 -31.57 -0.60 -4.33 16 25 O -0.16 -3.05 16.57 -31.57 -0.52 -3.57 16 26 C -0.04 -0.66 9.32 -39.10 -0.36 -1.02 16 27 H 0.20 2.95 7.80 -54.08 -0.42 2.53 16 28 H 0.12 2.32 6.28 -51.93 -0.33 1.99 16 29 H 0.07 1.05 6.61 -51.93 -0.34 0.70 16 30 H 0.29 5.99 8.26 -40.82 -0.34 5.65 16 31 H 0.12 1.75 6.21 -52.49 -0.33 1.43 16 32 H 0.13 1.43 8.06 -52.48 -0.42 1.00 16 33 H 0.14 2.13 7.18 -52.49 -0.38 1.75 16 34 H 0.15 1.80 8.06 -52.48 -0.42 1.37 16 35 H 0.15 2.19 7.57 -52.48 -0.40 1.80 16 LS Contribution 333.03 15.07 5.02 5.02 Total: -1.00 -27.93 333.03 -7.74 -35.68 By element: Atomic # 1 Polarization: 9.14 SS G_CDS: -2.56 Total: 6.58 kcal Atomic # 6 Polarization: -7.33 SS G_CDS: -3.15 Total: -10.48 kcal Atomic # 7 Polarization: -26.51 SS G_CDS: 0.39 Total: -26.13 kcal Atomic # 8 Polarization: -20.58 SS G_CDS: -1.07 Total: -21.65 kcal Atomic # 14 Polarization: 17.70 SS G_CDS: -5.04 Total: 12.65 kcal Atomic # 17 Polarization: -0.34 SS G_CDS: -1.33 Total: -1.67 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -27.93 -7.74 -35.68 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491020974.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 159.537 kcal (2) G-P(sol) polarization free energy of solvation -27.932 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.605 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.745 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.677 kcal (6) G-S(sol) free energy of system = (1) + (5) 123.860 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.14 seconds